Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318884

Identifier: 158318884

GI number: 158318884

Start: 8749866

End: 8750384

Strand: Direct

Name: 158318884

Synonym: Franean1_7167

Alternate gene names: NA

Gene position: 8749866-8750384 (Clockwise)

Preceding gene: 158318882

Following gene: 158318887

Centisome position: 97.42

GC content: 65.51

Gene sequence:

>519_bases
ATGACCGACCTCACTCCAGTTGACCGCGAAACATGGCTCAGCGAGGAGGAACGGCTTTCACCTCGATACCGGATCGATAT
GCCGGTCCTTCCCTATCAGCGTCGCGCGAGTGAAGGTCCGGACTGTATCGAGGTTTCCCGGGATTCACCGCTCGACCTCC
GGCAGGCCGCCGAGATGTTCGGAAACGCGGCCAAGCGGGAATGCGGCTACGATTTTCCGCTCGCCCGGGCGTTGAACTTC
GGGGAGCAGCGGGTATGGCTGCTCCCCGCCCCGCGGGTGAACGCGGTCAGCTTCGTGGCCGCCGGCGCCGTCGCTTTCAA
GCTCATGGACGGGGTGTGGGAGCTCAGGTGGATGTACGTCCACCCGTTCGAGCGGGGAAAGCAGGTGATCGACTTCTACT
GGCCGAGATTCGTGGCGCTGTACGGCGACTTCACCGTTCAGCCGCCGGTCACGGCCACTGCCCAGGCGGTGCTGAACCGC
CTGGGCTGGACCGCGCACGGCCCCCGATCCGCGGCATAG

Upstream 100 bases:

>100_bases
CGTTCGCCGCCCGGGGCGCCGCCCGGAACAGCCCCGAGGGCGTCACCCACCCGGATCCGGTTCAACGGCGAACGACCGAA
CCACGCAGTGAAGGGGAACG

Downstream 100 bases:

>100_bases
ACCGGCCGACGGCCTCCCGACCGCGTCCCAGCGGCGGGCCGGCGGCGTCAGCTCGCGGGTGGCACCGGGTGGTTGGCCCG
GATCACGTCGGCGGGGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTDLTPVDRETWLSEEERLSPRYRIDMPVLPYQRRASEGPDCIEVSRDSPLDLRQAAEMFGNAAKRECGYDFPLARALNF
GEQRVWLLPAPRVNAVSFVAAGAVAFKLMDGVWELRWMYVHPFERGKQVIDFYWPRFVALYGDFTVQPPVTATAQAVLNR
LGWTAHGPRSAA

Sequences:

>Translated_172_residues
MTDLTPVDRETWLSEEERLSPRYRIDMPVLPYQRRASEGPDCIEVSRDSPLDLRQAAEMFGNAAKRECGYDFPLARALNF
GEQRVWLLPAPRVNAVSFVAAGAVAFKLMDGVWELRWMYVHPFERGKQVIDFYWPRFVALYGDFTVQPPVTATAQAVLNR
LGWTAHGPRSAA
>Mature_171_residues
TDLTPVDRETWLSEEERLSPRYRIDMPVLPYQRRASEGPDCIEVSRDSPLDLRQAAEMFGNAAKRECGYDFPLARALNFG
EQRVWLLPAPRVNAVSFVAAGAVAFKLMDGVWELRWMYVHPFERGKQVIDFYWPRFVALYGDFTVQPPVTATAQAVLNRL
GWTAHGPRSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19605; Mature: 19473

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLTPVDRETWLSEEERLSPRYRIDMPVLPYQRRASEGPDCIEVSRDSPLDLRQAAEMF
CCCCCCCCHHHHCCHHHHCCCCEEECCCCCCCHHHCCCCCCEEEECCCCCCCHHHHHHHH
GNAAKRECGYDFPLARALNFGEQRVWLLPAPRVNAVSFVAAGAVAFKLMDGVWELRWMYV
HHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEE
HPFERGKQVIDFYWPRFVALYGDFTVQPPVTATAQAVLNRLGWTAHGPRSAA
CCHHHCHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TDLTPVDRETWLSEEERLSPRYRIDMPVLPYQRRASEGPDCIEVSRDSPLDLRQAAEMF
CCCCCCCHHHHCCHHHHCCCCEEECCCCCCCHHHCCCCCCEEEECCCCCCCHHHHHHHH
GNAAKRECGYDFPLARALNFGEQRVWLLPAPRVNAVSFVAAGAVAFKLMDGVWELRWMYV
HHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEE
HPFERGKQVIDFYWPRFVALYGDFTVQPPVTATAQAVLNRLGWTAHGPRSAA
CCHHHCHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA