| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318881
Identifier: 158318881
GI number: 158318881
Start: 8745314
End: 8746303
Strand: Direct
Name: 158318881
Synonym: Franean1_7164
Alternate gene names: NA
Gene position: 8745314-8746303 (Clockwise)
Preceding gene: 158318880
Following gene: 158318882
Centisome position: 97.36
GC content: 74.14
Gene sequence:
>990_bases ATGATGATGCTCCGCGGCGCCCGCCTGGTGGCCGCCGGCGTACCCCTGGTTCTCACGGCCGCGGCCTGTGCCGGAGCCGC CGCCGACGTGCGGGACAGCGTCGTCGGCGGCAGCGCTGCCGCCGGTGACAGCCCCGGCACCGGTGCCCGCGCCGACACCG CCGCGCTGCGAGTGGACTGGGTCGGTGGTTTCGTGACACCGGAGATGCTGGCCACCCGGCTGCCGATAGTGGCCGTCTAC CCCGACGGCCGGGTGATGAGCGAGGTCCCGCGGGCCGCCGTTCATCCGGGGCCAGCGCTGTCCTACATCCAGCTGCGGCG GATCTCGGCCGCCGACGTGCGGAAGCTCGTCGACCGCGCGGCCGCGGCCGGCGTCGGCGCCGAACAGGACTTCGGCCAGC CACCGGTCGCGGATGCACCGTCGACCCGATTCACCCTCCGAACCGCGGCCGGCGTCGAGACGATGCAGGTGGAAGCGCTG TTCGAGGCGGACGGCCACGGGCTGACAGCGCAGCAGCAGTCCGCGCGGCGGGCAGCCCAGGAGCTGTTCACAGCACTCAC CGACCTGCCCGCCACGCTGGGCCCAGGTGCGGTCAGCGAGCCCGAGCCGTACATTCCGGCTGCGGTGGCCGCGATCGCCT CCCCCTGGGTCGGAGACTGTTCCTCGCCCTCCGACGCGGCCGTTCCGTCCGGCAGCGACCTTCCGTCCGGCGGCACCGCT CCGTCCGGCACCGACGTTCCGTGCGGCGGCGGTACCGCGGGTACGGAGCGCGTGTGGCCCGGGCCGGCGCTGCCGGGCGA GCCGGTCGGCGGAGGTGTCGATCTGAGCTGCGTGACAGCCAGCGGTGAGGACGCCACGAAACTGCTGGCGGCAGCGCGTA CGGCTGTGACCACCACGCGGTGGGCGTCCGACGGCAGGCAGTGGAGGGTCAGCTTCCGCCCGCTGCTGCCAGGCGAGTCC GGATGCGCGGACCTGCGTGCGACCGATTGA
Upstream 100 bases:
>100_bases ACGCACTGAAGGCCATCAGGAAGGCGTGACAGCGGACTGCGGGTTCATCCCTTCCTGAGGGGAACCGGACCGGGGCCCGC TGCGTCCAAGGGCCATGGCG
Downstream 100 bases:
>100_bases TCGACCCCCACCCGACGGTCCGGACGGGATCGCCCAGGCGGAGACAAGGCGGTTCTACTCCATCTTCGATGGAGGACCGA GGGGTGGCGGCACGCTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MMMLRGARLVAAGVPLVLTAAACAGAAADVRDSVVGGSAAAGDSPGTGARADTAALRVDWVGGFVTPEMLATRLPIVAVY PDGRVMSEVPRAAVHPGPALSYIQLRRISAADVRKLVDRAAAAGVGAEQDFGQPPVADAPSTRFTLRTAAGVETMQVEAL FEADGHGLTAQQQSARRAAQELFTALTDLPATLGPGAVSEPEPYIPAAVAAIASPWVGDCSSPSDAAVPSGSDLPSGGTA PSGTDVPCGGGTAGTERVWPGPALPGEPVGGGVDLSCVTASGEDATKLLAAARTAVTTTRWASDGRQWRVSFRPLLPGES GCADLRATD
Sequences:
>Translated_329_residues MMMLRGARLVAAGVPLVLTAAACAGAAADVRDSVVGGSAAAGDSPGTGARADTAALRVDWVGGFVTPEMLATRLPIVAVY PDGRVMSEVPRAAVHPGPALSYIQLRRISAADVRKLVDRAAAAGVGAEQDFGQPPVADAPSTRFTLRTAAGVETMQVEAL FEADGHGLTAQQQSARRAAQELFTALTDLPATLGPGAVSEPEPYIPAAVAAIASPWVGDCSSPSDAAVPSGSDLPSGGTA PSGTDVPCGGGTAGTERVWPGPALPGEPVGGGVDLSCVTASGEDATKLLAAARTAVTTTRWASDGRQWRVSFRPLLPGES GCADLRATD >Mature_329_residues MMMLRGARLVAAGVPLVLTAAACAGAAADVRDSVVGGSAAAGDSPGTGARADTAALRVDWVGGFVTPEMLATRLPIVAVY PDGRVMSEVPRAAVHPGPALSYIQLRRISAADVRKLVDRAAAAGVGAEQDFGQPPVADAPSTRFTLRTAAGVETMQVEAL FEADGHGLTAQQQSARRAAQELFTALTDLPATLGPGAVSEPEPYIPAAVAAIASPWVGDCSSPSDAAVPSGSDLPSGGTA PSGTDVPCGGGTAGTERVWPGPALPGEPVGGGVDLSCVTASGEDATKLLAAARTAVTTTRWASDGRQWRVSFRPLLPGES GCADLRATD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33029; Mature: 33029
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMLRGARLVAAGVPLVLTAAACAGAAADVRDSVVGGSAAAGDSPGTGARADTAALRVDW CCEECCCCHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC VGGFVTPEMLATRLPIVAVYPDGRVMSEVPRAAVHPGPALSYIQLRRISAADVRKLVDRA CCCCCCHHHHHHHCCEEEECCCCHHHHHCCHHHCCCCCCHHHHHHHHCCHHHHHHHHHHH AAAGVGAEQDFGQPPVADAPSTRFTLRTAAGVETMQVEALFEADGHGLTAQQQSARRAAQ HHHCCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHH ELFTALTDLPATLGPGAVSEPEPYIPAAVAAIASPWVGDCSSPSDAAVPSGSDLPSGGTA HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PSGTDVPCGGGTAGTERVWPGPALPGEPVGGGVDLSCVTASGEDATKLLAAARTAVTTTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH WASDGRQWRVSFRPLLPGESGCADLRATD CCCCCCEEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MMMLRGARLVAAGVPLVLTAAACAGAAADVRDSVVGGSAAAGDSPGTGARADTAALRVDW CCEECCCCHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC VGGFVTPEMLATRLPIVAVYPDGRVMSEVPRAAVHPGPALSYIQLRRISAADVRKLVDRA CCCCCCHHHHHHHCCEEEECCCCHHHHHCCHHHCCCCCCHHHHHHHHCCHHHHHHHHHHH AAAGVGAEQDFGQPPVADAPSTRFTLRTAAGVETMQVEALFEADGHGLTAQQQSARRAAQ HHHCCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHH ELFTALTDLPATLGPGAVSEPEPYIPAAVAAIASPWVGDCSSPSDAAVPSGSDLPSGGTA HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PSGTDVPCGGGTAGTERVWPGPALPGEPVGGGVDLSCVTASGEDATKLLAAARTAVTTTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH WASDGRQWRVSFRPLLPGESGCADLRATD CCCCCCEEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA