| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318866
Identifier: 158318866
GI number: 158318866
Start: 8728474
End: 8729070
Strand: Reverse
Name: 158318866
Synonym: Franean1_7147
Alternate gene names: NA
Gene position: 8729070-8728474 (Counterclockwise)
Preceding gene: 158318867
Following gene: 158318865
Centisome position: 97.18
GC content: 68.84
Gene sequence:
>597_bases GTGGGCCCGACCAGGGAACCGGGAAGTTGCCGCTCCCGGACGGGCGCCGACCGAATATGGTCGTGCGCCATGCGGAACTC GTTCTGTTCGTCCTGCGGCACGAAATACCAGCCTGATGTGGCGTGGCCGCGGGTGTGCACTGGCTGCGGTGAGACAACGT GGCTCAATCCGCTTCCGGTGGCGGTGGCGTTGTTGCCCGTCGTGGAACCTGACGGCGGACGCGGTCTGGTGGTGGTGCGC CGCGACATTGACCCCGGCCGTGGCGAGCTGGCGCTGCCCGGCGGTTTCATGGAGCTGGACGAGGCCTGGCGCGACGCTGT CGTTCGGGAGCTGAGCGAGGAGACGGGAATCATCGAGCAGGCGGCGGATGTCCGCCTGTTCGACGTGCACAGCGGGAACG ACGGCCGGTTCCTGCTGGTGTTCGGCCTCCTGCCGGAACGGCGTTGGGCCGAGCTACCGCCGGTGATCGCGACGAACGAG ACGACCGAGTGGCTGGTCGTCACGGAGCCGCGGCAGCTCGTGTTCCCGACCCATACCGACGCGATGGCCTCCTACTTCGC CCGGATCCGGGGGCAGGTGCCGGCCTCCGCTTCCTGA
Upstream 100 bases:
>100_bases CCGTCCACCCTGGATGAGAGGTCGCCGTAGCCCACGGACGCTGGGGCGATCTCCCAGACTCGGACCAGGCTCGGCACCGG GGGGAGGGTCCCTGGCCGGC
Downstream 100 bases:
>100_bases AGCTCGTTCAGGCCCATCCTGGCGGGATCCTCGGACCAGGGGTCGGGACCCTGCCAGCGAGCCCGTCTCAACGGCACCGG CGGAATCGTCTCGCTGCGGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NUDIX Hydrolase; MutT-Like Protein; ADP-Ribose Pyrophosphatase; MutT-Family Protein
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MGPTREPGSCRSRTGADRIWSCAMRNSFCSSCGTKYQPDVAWPRVCTGCGETTWLNPLPVAVALLPVVEPDGGRGLVVVR RDIDPGRGELALPGGFMELDEAWRDAVVRELSEETGIIEQAADVRLFDVHSGNDGRFLLVFGLLPERRWAELPPVIATNE TTEWLVVTEPRQLVFPTHTDAMASYFARIRGQVPASAS
Sequences:
>Translated_198_residues MGPTREPGSCRSRTGADRIWSCAMRNSFCSSCGTKYQPDVAWPRVCTGCGETTWLNPLPVAVALLPVVEPDGGRGLVVVR RDIDPGRGELALPGGFMELDEAWRDAVVRELSEETGIIEQAADVRLFDVHSGNDGRFLLVFGLLPERRWAELPPVIATNE TTEWLVVTEPRQLVFPTHTDAMASYFARIRGQVPASAS >Mature_197_residues GPTREPGSCRSRTGADRIWSCAMRNSFCSSCGTKYQPDVAWPRVCTGCGETTWLNPLPVAVALLPVVEPDGGRGLVVVRR DIDPGRGELALPGGFMELDEAWRDAVVRELSEETGIIEQAADVRLFDVHSGNDGRFLLVFGLLPERRWAELPPVIATNET TEWLVVTEPRQLVFPTHTDAMASYFARIRGQVPASAS
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21725; Mature: 21594
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPTREPGSCRSRTGADRIWSCAMRNSFCSSCGTKYQPDVAWPRVCTGCGETTWLNPLPV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHH AVALLPVVEPDGGRGLVVVRRDIDPGRGELALPGGFMELDEAWRDAVVRELSEETGIIEQ HHHEEEEECCCCCCEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHHH AADVRLFDVHSGNDGRFLLVFGLLPERRWAELPPVIATNETTEWLVVTEPRQLVFPTHTD HCCEEEEEEECCCCCCEEEEEECCCCCHHHCCCCEEECCCCCEEEEEECCCEEEECCCHH AMASYFARIRGQVPASAS HHHHHHHHHHCCCCCCCC >Mature Secondary Structure GPTREPGSCRSRTGADRIWSCAMRNSFCSSCGTKYQPDVAWPRVCTGCGETTWLNPLPV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHH AVALLPVVEPDGGRGLVVVRRDIDPGRGELALPGGFMELDEAWRDAVVRELSEETGIIEQ HHHEEEEECCCCCCEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHHH AADVRLFDVHSGNDGRFLLVFGLLPERRWAELPPVIATNETTEWLVVTEPRQLVFPTHTD HCCEEEEEEECCCCCCEEEEEECCCCCHHHCCCCEEECCCCCEEEEEECCCEEEECCCHH AMASYFARIRGQVPASAS HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA