Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318865

Identifier: 158318865

GI number: 158318865

Start: 8727919

End: 8728269

Strand: Reverse

Name: 158318865

Synonym: Franean1_7146

Alternate gene names: NA

Gene position: 8728269-8727919 (Counterclockwise)

Preceding gene: 158318866

Following gene: 158318864

Centisome position: 97.17

GC content: 66.67

Gene sequence:

>351_bases
ATGATGCACCTGGTCGGGCGGTGGCGGATCGTGGAGATGAACCTGTGGGACCAGGACGCCATAGACCTCGTTGAGCCCGG
GTTCATCGAGTTCACCGAGGGCGGGACCGGCCAGTTCGGGTTCATCGCCGTCCGCGGTGGGATGGACTGCCGTTCCACCG
AACGCGGCGACCGGCCCCTCGTTGAGTTCAGTTGGGACGGCGACGACGACGGCCACCAGGTCAGCGGGCGCGGCTGGGCC
GCACTGAGCGAGAACGGCGTGCTCGCCGGGCACCTGTTCTTCCACATGGGAGACGACTCAGGCTTCCGCGCTACGCCGTT
TACCGAAACTGACGTACGGGACGGGCGTTGA

Upstream 100 bases:

>100_bases
ACTGGCTGATCTGCTGTCGTCCTGTGCGCGTCCTCATCGCCGGTAACCGAAGTCCCGTGGGCATGGCGCGGTCACGGTCA
CAGCATGTGTGGAGGATCGA

Downstream 100 bases:

>100_bases
GCGAGTGCTACGAGTTCTTACGGCCGGGCAGCATCTCGACGCGCAGGCGCAGGCCTACATATGCTCTCTGTCCACTAGCG
CCGGCTTCCCCAAGCCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPLVEFSWDGDDDGHQVSGRGWA
ALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR

Sequences:

>Translated_116_residues
MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPLVEFSWDGDDDGHQVSGRGWA
ALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR
>Mature_116_residues
MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPLVEFSWDGDDDGHQVSGRGWA
ALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12923; Mature: 12923

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPL
CCEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCE
VEFSWDGDDDGHQVSGRGWAALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR
EEEECCCCCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPL
CCEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCE
VEFSWDGDDDGHQVSGRGWAALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR
EEEECCCCCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA