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The map label for this gene is yddH [H]

Identifier: 158318838

GI number: 158318838

Start: 8689338

End: 8689886

Strand: Direct

Name: yddH [H]

Synonym: Franean1_7119

Alternate gene names: 158318838

Gene position: 8689338-8689886 (Clockwise)

Preceding gene: 158318837

Following gene: 158318841

Centisome position: 96.74

GC content: 70.67

Gene sequence:

>549_bases
ATGCCGACCTCGGCTGATGAAGCCGCGCCAGGGAGCGAAATCGGGACGGGCAAGGTCGGCATAACGCCAGCCGGGCAGGC
GTATGTGGCGCGGGTTCTTGCTGTTGCCGCGTCCTACGGCCAGGATTTCGCTCCTGCTGCTGCGGACGGCGCTGGTGAGG
TCGCCGCGACGTGGGCGCTTTCTCAGGTGGGTGTCCCGTATGTGTGGGGCGGTGAGACGCCGGGGGTCGGGTTCGACTGT
TCTGGGCTGACCCAGGCTGCTTTCGAGGTGGCCGGGATCGGGCTGCCTCGGGTGGCTCAGGGCCAGTTCGACGCCGGGCC
CCGCCTTCCGGCTGGTGCCGGGCTGCGGCCTGGTGACTTGGTGTTCTTTGGTGGCGGGCCGGCGGACGTCACCCATGTCG
GTCTCTACCTGGGAGTCCGGGATGGCCGGCCGGTGATGGTGGACGCGCCTCACCGAGGCGCCGTCGTCCGGGTCGAGGCG
TTCCCGACCGTGGTAGGGGCCGCCTGGGGTGCGGACATCTACCTGGGCGCCACCCGACCCGCCCCCTGA

Upstream 100 bases:

>100_bases
CTCGGTGGCCTGGGTGACGACCTGCGCGACGTAGGCGTCTGAATGGTTATACGCCCTATGCCGACGTCGGCATAGGGCCT
ATTATGCCGGCCCTGTTGTT

Downstream 100 bases:

>100_bases
CGCGCGAGTTCGTCATTGAGCCAGCGGGGAGACGCTCGGTAGACAACTATTAGAAGGCGATTGCCAGTTGGACGAATCAT
GTCTTCTTCACCGATCGAGG

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPTSADEAAPGSEIGTGKVGITPAGQAYVARVLAVAASYGQDFAPAAADGAGEVAATWALSQVGVPYVWGGETPGVGFDC
SGLTQAAFEVAGIGLPRVAQGQFDAGPRLPAGAGLRPGDLVFFGGGPADVTHVGLYLGVRDGRPVMVDAPHRGAVVRVEA
FPTVVGAAWGADIYLGATRPAP

Sequences:

>Translated_182_residues
MPTSADEAAPGSEIGTGKVGITPAGQAYVARVLAVAASYGQDFAPAAADGAGEVAATWALSQVGVPYVWGGETPGVGFDC
SGLTQAAFEVAGIGLPRVAQGQFDAGPRLPAGAGLRPGDLVFFGGGPADVTHVGLYLGVRDGRPVMVDAPHRGAVVRVEA
FPTVVGAAWGADIYLGATRPAP
>Mature_181_residues
PTSADEAAPGSEIGTGKVGITPAGQAYVARVLAVAASYGQDFAPAAADGAGEVAATWALSQVGVPYVWGGETPGVGFDCS
GLTQAAFEVAGIGLPRVAQGQFDAGPRLPAGAGLRPGDLVFFGGGPADVTHVGLYLGVRDGRPVMVDAPHRGAVVRVEAF
PTVVGAAWGADIYLGATRPAP

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=161, Percent_Identity=33.5403726708075, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786421, Length=130, Percent_Identity=36.1538461538462, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 18069; Mature: 17938

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSADEAAPGSEIGTGKVGITPAGQAYVARVLAVAASYGQDFAPAAADGAGEVAATWAL
CCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
SQVGVPYVWGGETPGVGFDCSGLTQAAFEVAGIGLPRVAQGQFDAGPRLPAGAGLRPGDL
HHCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VFFGGGPADVTHVGLYLGVRDGRPVMVDAPHRGAVVRVEAFPTVVGAAWGADIYLGATRP
EEECCCCCCCEEEEEEEEECCCCEEEEECCCCCCEEEEECCCCCHHHCCCCEEEEECCCC
AP
CC
>Mature Secondary Structure 
PTSADEAAPGSEIGTGKVGITPAGQAYVARVLAVAASYGQDFAPAAADGAGEVAATWAL
CCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
SQVGVPYVWGGETPGVGFDCSGLTQAAFEVAGIGLPRVAQGQFDAGPRLPAGAGLRPGDL
HHCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VFFGGGPADVTHVGLYLGVRDGRPVMVDAPHRGAVVRVEAFPTVVGAAWGADIYLGATRP
EEECCCCCCCEEEEEEEEECCCCEEEEECCCCCCEEEEECCCCCHHHCCCCEEEEECCCC
AP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]