The gene/protein map for NC_009921 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318792

Identifier: 158318792

GI number: 158318792

Start: 8620943

End: 8621236

Strand: Direct

Name: 158318792

Synonym: Franean1_7064

Alternate gene names: NA

Gene position: 8620943-8621236 (Clockwise)

Preceding gene: 158318791

Following gene: 158318804

Centisome position: 95.98

GC content: 67.01

Gene sequence:

>294_bases
GTGGTTCGTTTCCCCGTCACAGCCTGCCAGCCATCTCCCGTCCGTTCACAATGCACACGAGCCACCCGGAACGGCCGCCA
GTTGATGCTACGTCCCCGCGACATCCACGAAGCGGTCGAGCAGGCCCGCGCCAAACAGAACACCGACGAGTGGAAACAGC
GCCCCCGGCTTGCCCACGTCCTCGCCGCCACCGCCCTCAACCTGATCCGGTTGGACGCGTGGTGGACCGGCACGCTACTC
GACCGGCCTCGGGCCAGCCACCTCGCAAGACTCGACTTCAGCCTCGCTGCGTAG

Upstream 100 bases:

>100_bases
GAGCTCTGGCGTTCTCGGCAGCGCGCGCAGCTTCCTCGGCACTGCCGAGCGCGGCCTGCCGCTCACCGTCGAGCGTGTCG
GCGCGTTCCGGGAATCGATC

Downstream 100 bases:

>100_bases
CCGAATTGGGCAACAGAGTCCCACAAGCGGAAAGGCGGTTCTCAGGACCAGGCGTCCGTGATGCCGAAGGAGGTCTCCGT
GCGGAATCGATAGCTCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHVLAATALNLIRLDAWWTGTLL
DRPRASHLARLDFSLAA

Sequences:

>Translated_97_residues
MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHVLAATALNLIRLDAWWTGTLL
DRPRASHLARLDFSLAA
>Mature_97_residues
MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHVLAATALNLIRLDAWWTGTLL
DRPRASHLARLDFSLAA

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11096; Mature: 11096

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHV
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHCHHHHHH
LAATALNLIRLDAWWTGTLLDRPRASHLARLDFSLAA
HHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHV
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHCHHHHHH
LAATALNLIRLDAWWTGTLLDRPRASHLARLDFSLAA
HHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA