| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318792
Identifier: 158318792
GI number: 158318792
Start: 8620943
End: 8621236
Strand: Direct
Name: 158318792
Synonym: Franean1_7064
Alternate gene names: NA
Gene position: 8620943-8621236 (Clockwise)
Preceding gene: 158318791
Following gene: 158318804
Centisome position: 95.98
GC content: 67.01
Gene sequence:
>294_bases GTGGTTCGTTTCCCCGTCACAGCCTGCCAGCCATCTCCCGTCCGTTCACAATGCACACGAGCCACCCGGAACGGCCGCCA GTTGATGCTACGTCCCCGCGACATCCACGAAGCGGTCGAGCAGGCCCGCGCCAAACAGAACACCGACGAGTGGAAACAGC GCCCCCGGCTTGCCCACGTCCTCGCCGCCACCGCCCTCAACCTGATCCGGTTGGACGCGTGGTGGACCGGCACGCTACTC GACCGGCCTCGGGCCAGCCACCTCGCAAGACTCGACTTCAGCCTCGCTGCGTAG
Upstream 100 bases:
>100_bases GAGCTCTGGCGTTCTCGGCAGCGCGCGCAGCTTCCTCGGCACTGCCGAGCGCGGCCTGCCGCTCACCGTCGAGCGTGTCG GCGCGTTCCGGGAATCGATC
Downstream 100 bases:
>100_bases CCGAATTGGGCAACAGAGTCCCACAAGCGGAAAGGCGGTTCTCAGGACCAGGCGTCCGTGATGCCGAAGGAGGTCTCCGT GCGGAATCGATAGCTCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHVLAATALNLIRLDAWWTGTLL DRPRASHLARLDFSLAA
Sequences:
>Translated_97_residues MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHVLAATALNLIRLDAWWTGTLL DRPRASHLARLDFSLAA >Mature_97_residues MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHVLAATALNLIRLDAWWTGTLL DRPRASHLARLDFSLAA
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11096; Mature: 11096
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHV CCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHCHHHHHH LAATALNLIRLDAWWTGTLLDRPRASHLARLDFSLAA HHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MVRFPVTACQPSPVRSQCTRATRNGRQLMLRPRDIHEAVEQARAKQNTDEWKQRPRLAHV CCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHCHHHHHH LAATALNLIRLDAWWTGTLLDRPRASHLARLDFSLAA HHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA