| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318804
Identifier: 158318804
GI number: 158318804
Start: 8635126
End: 8636391
Strand: Direct
Name: 158318804
Synonym: Franean1_7076
Alternate gene names: NA
Gene position: 8635126-8636391 (Clockwise)
Preceding gene: 158318792
Following gene: 158318805
Centisome position: 96.14
GC content: 71.17
Gene sequence:
>1266_bases GTGCTGGGAAGCCGCACAAGGGGCGCGAGACCGTCGACCTCGGCCACTGAACCCGCTGCCACCGCTGCATCCCCTGCTTC GGCGACGCAGTTGCTCGCCGTCGAGTGTCTAGCCGGCCTGGAAGCGCTGACCGACGAGCTGGTTGGCGCCGTCCACGCGG GCGACCGTCCCTGGATCGCCGCCTACGACACGGTGTCGGTGGATGATCTGCGTCGGGGCTGCGGCGCCTACCTGCGGCGA GTCCTCGAACGGGTCGCGGGCGAGGTCTCGGACGTAACAGACGACGAGGTGGCGGTGGGCATCGGCCGCGCCCGGGCTGA GCAGGGCGTCCCGCTGGAGGTGATGTTGCGGACCTTCCGGCTGGGCGGGCGCGTCGTGTGGGAGGCCTTGCTGCGTGCGG CCCGGCGTACCGGGGCGAGCTCGGAGATCATTGGCCCAGCGGCGACCGTGCTGTGGACCGTCGTCGACAGCATGTCCTCG TCGCTGTCCACGGCGTACCGGCAGATGCAGCTCGACCAGCTGCACCGGGCCGAGCGACGGCGCCACGCGGTGCTCGAGGA CCTCCTGGCCGGGCGTGCAGACGACGCGGCATTCCTGCAGCGCGCAGCCGGCGAGCTCGACCTGCCCGTCGGTGGGCGGT ACCTGGTCGTGGTTGCCGCCCTGTCCGATCAGCGGTCGCCGGCCCCGGCTGGGCGCGCGCAGATAGTGCTGGACGCTCAC CGCATCCGGTCGATTTGGCACGAACGGGCCGACACGGTCGTCGGGGTTGTCCCGCTTCCCAAGACGTCGTCCTTCTCGCG TTTGTCGTCCGATGCGGGCGCAGCGCTTGGCGGGCGTGCGGCCGCCGCACACGTCAACGGCGGCCTGGCCGCCGTTGCTC TGGGCCACCGGCTCGCCACCTTGGCGCTGAGCACGGTGCCCATCAACGCGTCGGGCCTTGTGAGCATCGATGAACGTGTC CCAGAATCCCTTCTCGTCCGCTCGCCGGAGCTGTGCCGCCGGCTCGTCGACACCTGGCTCGGCCCGGTGCTCACCCTGCC TGTTAAGGAATCCAAGCCCCTTCTGGACACCCTCACCGCCTGGCTCGAGGCCGACCGGTCAGCCTCGGCGGCCGCCGAGC GGCTCTTCTGTCACCGCAACACCGTGCTGAACCGGTTGCACCGCGTCGCCGTACTCACCGGACGGAGCCTCGACGGCCGG CGGCCCTTCGTCGAGCTGTCGCTCGCGCTGAGCGCCCTGGAGCTTCCCGAGCCACCCGCTTCCTGA
Upstream 100 bases:
>100_bases CTGCGCGAAGCCGGCCTCGTCGAGCGACACCCGTCGGGTATCCGCGTCTGTGATCCGAGCGGGCTACACGTCCTGGCGGC GGGGACAGGAGGCGAACGCC
Downstream 100 bases:
>100_bases TACGTCTCGCCGGCGGGACGCCGCGATCCGGAGCAGGCGGGCGGACGGGTCGGCGGATGGCGGGGCGAGGCGGCGCTTGT GCGTAGCGCACAACCGCCGG
Product: PucR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein; Transcriptional Regulator PucR Family; Transcriptional Regulator CdaR; PE-PGRS Family Protein
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MLGSRTRGARPSTSATEPAATAASPASATQLLAVECLAGLEALTDELVGAVHAGDRPWIAAYDTVSVDDLRRGCGAYLRR VLERVAGEVSDVTDDEVAVGIGRARAEQGVPLEVMLRTFRLGGRVVWEALLRAARRTGASSEIIGPAATVLWTVVDSMSS SLSTAYRQMQLDQLHRAERRRHAVLEDLLAGRADDAAFLQRAAGELDLPVGGRYLVVVAALSDQRSPAPAGRAQIVLDAH RIRSIWHERADTVVGVVPLPKTSSFSRLSSDAGAALGGRAAAAHVNGGLAAVALGHRLATLALSTVPINASGLVSIDERV PESLLVRSPELCRRLVDTWLGPVLTLPVKESKPLLDTLTAWLEADRSASAAAERLFCHRNTVLNRLHRVAVLTGRSLDGR RPFVELSLALSALELPEPPAS
Sequences:
>Translated_421_residues MLGSRTRGARPSTSATEPAATAASPASATQLLAVECLAGLEALTDELVGAVHAGDRPWIAAYDTVSVDDLRRGCGAYLRR VLERVAGEVSDVTDDEVAVGIGRARAEQGVPLEVMLRTFRLGGRVVWEALLRAARRTGASSEIIGPAATVLWTVVDSMSS SLSTAYRQMQLDQLHRAERRRHAVLEDLLAGRADDAAFLQRAAGELDLPVGGRYLVVVAALSDQRSPAPAGRAQIVLDAH RIRSIWHERADTVVGVVPLPKTSSFSRLSSDAGAALGGRAAAAHVNGGLAAVALGHRLATLALSTVPINASGLVSIDERV PESLLVRSPELCRRLVDTWLGPVLTLPVKESKPLLDTLTAWLEADRSASAAAERLFCHRNTVLNRLHRVAVLTGRSLDGR RPFVELSLALSALELPEPPAS >Mature_421_residues MLGSRTRGARPSTSATEPAATAASPASATQLLAVECLAGLEALTDELVGAVHAGDRPWIAAYDTVSVDDLRRGCGAYLRR VLERVAGEVSDVTDDEVAVGIGRARAEQGVPLEVMLRTFRLGGRVVWEALLRAARRTGASSEIIGPAATVLWTVVDSMSS SLSTAYRQMQLDQLHRAERRRHAVLEDLLAGRADDAAFLQRAAGELDLPVGGRYLVVVAALSDQRSPAPAGRAQIVLDAH RIRSIWHERADTVVGVVPLPKTSSFSRLSSDAGAALGGRAAAAHVNGGLAAVALGHRLATLALSTVPINASGLVSIDERV PESLLVRSPELCRRLVDTWLGPVLTLPVKESKPLLDTLTAWLEADRSASAAAERLFCHRNTVLNRLHRVAVLTGRSLDGR RPFVELSLALSALELPEPPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44697; Mature: 44697
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGSRTRGARPSTSATEPAATAASPASATQLLAVECLAGLEALTDELVGAVHAGDRPWIA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE AYDTVSVDDLRRGCGAYLRRVLERVAGEVSDVTDDEVAVGIGRARAEQGVPLEVMLRTFR EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCCHHHHHHHHH LGGRVVWEALLRAARRTGASSEIIGPAATVLWTVVDSMSSSLSTAYRQMQLDQLHRAERR HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHAVLEDLLAGRADDAAFLQRAAGELDLPVGGRYLVVVAALSDQRSPAPAGRAQIVLDAH HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEHH RIRSIWHERADTVVGVVPLPKTSSFSRLSSDAGAALGGRAAAAHVNGGLAAVALGHRLAT HHHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCHHCCCHHEECCCCCHHHHHHHHHHHH LALSTVPINASGLVSIDERVPESLLVRSPELCRRLVDTWLGPVLTLPVKESKPLLDTLTA HHHHHCCCCCCCCEEEHHHCCHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHH WLEADRSASAAAERLFCHRNTVLNRLHRVAVLTGRSLDGRRPFVELSLALSALELPEPPA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC S C >Mature Secondary Structure MLGSRTRGARPSTSATEPAATAASPASATQLLAVECLAGLEALTDELVGAVHAGDRPWIA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE AYDTVSVDDLRRGCGAYLRRVLERVAGEVSDVTDDEVAVGIGRARAEQGVPLEVMLRTFR EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCCHHHHHHHHH LGGRVVWEALLRAARRTGASSEIIGPAATVLWTVVDSMSSSLSTAYRQMQLDQLHRAERR HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHAVLEDLLAGRADDAAFLQRAAGELDLPVGGRYLVVVAALSDQRSPAPAGRAQIVLDAH HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEHH RIRSIWHERADTVVGVVPLPKTSSFSRLSSDAGAALGGRAAAAHVNGGLAAVALGHRLAT HHHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCHHCCCHHEECCCCCHHHHHHHHHHHH LALSTVPINASGLVSIDERVPESLLVRSPELCRRLVDTWLGPVLTLPVKESKPLLDTLTA HHHHHCCCCCCCCEEEHHHCCHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHH WLEADRSASAAAERLFCHRNTVLNRLHRVAVLTGRSLDGRRPFVELSLALSALELPEPPA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA