| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318791
Identifier: 158318791
GI number: 158318791
Start: 8618727
End: 8620721
Strand: Direct
Name: 158318791
Synonym: Franean1_7063
Alternate gene names: NA
Gene position: 8618727-8620721 (Clockwise)
Preceding gene: 158318787
Following gene: 158318792
Centisome position: 95.96
GC content: 65.31
Gene sequence:
>1995_bases ATGGCGCAGTCAGGTGGCGGTCAGTCGGAATGGCAGCAGCGACGCGCCGCGGCTGCAGGTGCTGAGCGGGAGGCTGCGCG ACAACGTAAACGCGAAGCGACCGCGCGAGCAAAGCAGGACGAGCGCGAGCGGGAGCAGGCCCAGCGCCAGCAGTCGGTGG ACGACGACAACGCTGCCGCAGCCGCTCACATCGCAGAGCTGGGCAGGAACCTGCTACTCAACGTCTTGGGCCTCCCTGCC TTCACCGTGGCCGCGCTGGAGGTAGTACCGGAGCAGTCGATCTTTCAGCCGGGATCGCTGGCAGTCGCTGGTAGGGCGCC GGATTGGGAGCAATACAAGCCTCCGGCTCCTGGTCGGGCCAGCCGGCTGGTGGGCGGGTCGGGTCGATACCAGCGGGAGT TCGACGCGGCCCGAAGCAAGTGGGAAGCCGACACGGCCGAGTTCCAGCGGGTCGAGACCGACCGGCTACGACAACTCGCT GCGGCTCGTACCAGACACGGCCAGCAGGTGGCCGCGGCCCTCGACCGTGCCGCGGCGCACAACGCCCGCATCGCGGCACA GTGGGCGGCGTGTCTGGACGGTGACCCGGAAGCGGTCGAGTGGTTCGTCGGCCAAGCGCTCGCGGCCACGTCCTATCCTG ACGGCTTCCCCGTAGCACGCAAGGTCGCCTACCGGCCCCAGGAACACGACATCGTCATCGAGATCGAGTTCCCACGACGA TCCGTGATCCCCGAAATCAGGGGATACAAGCTATTCAAGACCGCACCCGAGGTCAGGCCGGTAAAGTGGAAAGAGTCTGA AGTCAAGAAGCTATATGCGCAGCTCGTTGCCTGGATAACGTTGCGGATAGTGCACGAGGTTTTCGAGGCTACGAAGGCGC TTGACCTCATCGAGGTTGTTGTCTTCAACGGGACCGTCATCGATGTAGCACCCACGACCGGCAAAGATACTCTCTACCAT CTGGTAAGTCTCGAACCCGAACGGTCCCTGTTCGAGGCGAGCCTTGAACTCGACCGGGTCACCGATCCGATCGGATGCCT GCGCGAGCTGGGCGCGAAAGTCTCACCCAACCCTTACGACCTAGAAGCCGTGAAACCCGTTGTCACGTTCGATCTCCGCC GATTCAGGCTCGCCAACGATGCGGCCGAACTAGCCGATCTAGACTCCCGACCGAACCTCATGGAACTCACCCCGAGCGAG TTCGAGAAACTCATCGAAAAACTTCTCAAGGCCATGGGTATCGAAGCGTATCGCACCATCGACTCCCGCGACGATGGCAT AGACGTCGTCGCGACTAAAGACGACATCATCTTTGGTGGTGTCTGCCTGGTACAGGCTAAACGTACCAAGAACCGAGTCG AGCTCGGGACGGTTCAAGCGGTCGCTGGCTCCATGAACGACCACAACGCCGCTACCCCCGATGTTCAGCAGCAGTCGGTA CAGGCCCGTGGCCGGTCGAACAGCCGGCAGCGCCTCGGTGGCGGCCAGGGCATCAGCCGAGGCGGGAATGCGCAGACCGT CAGCGTCCAGATCGCCGAAGTAGGCGATCGAGGTGATGCTGGGCAGCTCTGCGACGGTAACGGCGGTCACCGCCTCGTCG AGGCCTTCCTGCGCGCGACGCTGGTCAGCCTGAGCCTCCAGCAACAGCTGCTGCCCATGGGCGACATCGCGAGGCCGCCG GTCGACGGGAAGTGCGGTCCACACCTTGCGGTCGCGGTCGCCGGGGCTCGCCTGCTCCAGCTGAGTGCGCAGCGCCGAGG TCCGCTCGAGGGCAGTGTTGTGGACGGCGGCGTTCCGGTCGCGGTCACGCCGAGCCGGGCTACGGCGCTGGCCCGGCCCT CGCGGTCAGCGCCCTCGGTGCTGGCGAGCAACCACTCGGCACGGGCCACGATCTCCGCCGGTCGGCCAGCGACCGCGGCG CGGGCACGGGCTGCCACGGTCTCGGCTGACCTGGCCTCCAATCGAAGATCTTGCCCCACCTCTACCGCCAGGTAG
Upstream 100 bases:
>100_bases GATGTCCGACGGAGCATCTCCCGGAGTGGACTGAACCGATCACCTCCGATCGCTATTCTGAGACTCCGCGTTGATAGTCG CCGACGGGGAGCGATGGACG
Downstream 100 bases:
>100_bases ACGGCCTGGGCGGCGTCATAGGCCGCACGTAGCTCGGCCAGTGGCTCGTCCGGGGCGGTGGCGGCAACCCTGCCGGTGGA GGAGGTCACGGATGCCAGAT
Product: restriction endonuclease
Products: NA
Alternate protein names: Mrr Restriction System Protein; Bacterial Stress Protein; Restriction System Protein; Restriction Endonuclease Superfamily Protein; Restriction Of Methylated Adenine Protein
Number of amino acids: Translated: 664; Mature: 663
Protein sequence:
>664_residues MAQSGGGQSEWQQRRAAAAGAEREAARQRKREATARAKQDEREREQAQRQQSVDDDNAAAAAHIAELGRNLLLNVLGLPA FTVAALEVVPEQSIFQPGSLAVAGRAPDWEQYKPPAPGRASRLVGGSGRYQREFDAARSKWEADTAEFQRVETDRLRQLA AARTRHGQQVAAALDRAAAHNARIAAQWAACLDGDPEAVEWFVGQALAATSYPDGFPVARKVAYRPQEHDIVIEIEFPRR SVIPEIRGYKLFKTAPEVRPVKWKESEVKKLYAQLVAWITLRIVHEVFEATKALDLIEVVVFNGTVIDVAPTTGKDTLYH LVSLEPERSLFEASLELDRVTDPIGCLRELGAKVSPNPYDLEAVKPVVTFDLRRFRLANDAAELADLDSRPNLMELTPSE FEKLIEKLLKAMGIEAYRTIDSRDDGIDVVATKDDIIFGGVCLVQAKRTKNRVELGTVQAVAGSMNDHNAATPDVQQQSV QARGRSNSRQRLGGGQGISRGGNAQTVSVQIAEVGDRGDAGQLCDGNGGHRLVEAFLRATLVSLSLQQQLLPMGDIARPP VDGKCGPHLAVAVAGARLLQLSAQRRGPLEGSVVDGGVPVAVTPSRATALARPSRSAPSVLASNHSARATISAGRPATAA RARAATVSADLASNRRSCPTSTAR
Sequences:
>Translated_664_residues MAQSGGGQSEWQQRRAAAAGAEREAARQRKREATARAKQDEREREQAQRQQSVDDDNAAAAAHIAELGRNLLLNVLGLPA FTVAALEVVPEQSIFQPGSLAVAGRAPDWEQYKPPAPGRASRLVGGSGRYQREFDAARSKWEADTAEFQRVETDRLRQLA AARTRHGQQVAAALDRAAAHNARIAAQWAACLDGDPEAVEWFVGQALAATSYPDGFPVARKVAYRPQEHDIVIEIEFPRR SVIPEIRGYKLFKTAPEVRPVKWKESEVKKLYAQLVAWITLRIVHEVFEATKALDLIEVVVFNGTVIDVAPTTGKDTLYH LVSLEPERSLFEASLELDRVTDPIGCLRELGAKVSPNPYDLEAVKPVVTFDLRRFRLANDAAELADLDSRPNLMELTPSE FEKLIEKLLKAMGIEAYRTIDSRDDGIDVVATKDDIIFGGVCLVQAKRTKNRVELGTVQAVAGSMNDHNAATPDVQQQSV QARGRSNSRQRLGGGQGISRGGNAQTVSVQIAEVGDRGDAGQLCDGNGGHRLVEAFLRATLVSLSLQQQLLPMGDIARPP VDGKCGPHLAVAVAGARLLQLSAQRRGPLEGSVVDGGVPVAVTPSRATALARPSRSAPSVLASNHSARATISAGRPATAA RARAATVSADLASNRRSCPTSTAR >Mature_663_residues AQSGGGQSEWQQRRAAAAGAEREAARQRKREATARAKQDEREREQAQRQQSVDDDNAAAAAHIAELGRNLLLNVLGLPAF TVAALEVVPEQSIFQPGSLAVAGRAPDWEQYKPPAPGRASRLVGGSGRYQREFDAARSKWEADTAEFQRVETDRLRQLAA ARTRHGQQVAAALDRAAAHNARIAAQWAACLDGDPEAVEWFVGQALAATSYPDGFPVARKVAYRPQEHDIVIEIEFPRRS VIPEIRGYKLFKTAPEVRPVKWKESEVKKLYAQLVAWITLRIVHEVFEATKALDLIEVVVFNGTVIDVAPTTGKDTLYHL VSLEPERSLFEASLELDRVTDPIGCLRELGAKVSPNPYDLEAVKPVVTFDLRRFRLANDAAELADLDSRPNLMELTPSEF EKLIEKLLKAMGIEAYRTIDSRDDGIDVVATKDDIIFGGVCLVQAKRTKNRVELGTVQAVAGSMNDHNAATPDVQQQSVQ ARGRSNSRQRLGGGQGISRGGNAQTVSVQIAEVGDRGDAGQLCDGNGGHRLVEAFLRATLVSLSLQQQLLPMGDIARPPV DGKCGPHLAVAVAGARLLQLSAQRRGPLEGSVVDGGVPVAVTPSRATALARPSRSAPSVLASNHSARATISAGRPATAAR ARAATVSADLASNRRSCPTSTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71635; Mature: 71503
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSGGGQSEWQQRRAAAAGAEREAARQRKREATARAKQDEREREQAQRQQSVDDDNAAA CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AAHIAELGRNLLLNVLGLPAFTVAALEVVPEQSIFQPGSLAVAGRAPDWEQYKPPAPGRA HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCEEEECCCCCHHCCCCCCCCCH SRLVGGSGRYQREFDAARSKWEADTAEFQRVETDRLRQLAAARTRHGQQVAAALDRAAAH HHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC NARIAAQWAACLDGDPEAVEWFVGQALAATSYPDGFPVARKVAYRPQEHDIVIEIEFPRR CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEEECCCH SVIPEIRGYKLFKTAPEVRPVKWKESEVKKLYAQLVAWITLRIVHEVFEATKALDLIEVV HCCCHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFNGTVIDVAPTTGKDTLYHLVSLEPERSLFEASLELDRVTDPIGCLRELGAKVSPNPYD EECCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC LEAVKPVVTFDLRRFRLANDAAELADLDSRPNLMELTPSEFEKLIEKLLKAMGIEAYRTI HHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHC DSRDDGIDVVATKDDIIFGGVCLVQAKRTKNRVELGTVQAVAGSMNDHNAATPDVQQQSV CCCCCCEEEEEECCCEEECCEEEEEEHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH QARGRSNSRQRLGGGQGISRGGNAQTVSVQIAEVGDRGDAGQLCDGNGGHRLVEAFLRAT HHHCCCCCHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH LVSLSLQQQLLPMGDIARPPVDGKCGPHLAVAVAGARLLQLSAQRRGPLEGSVVDGGVPV HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCE AVTPSRATALARPSRSAPSVLASNHSARATISAGRPATAARARAATVSADLASNRRSCPT EECCCHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC STAR CCCC >Mature Secondary Structure AQSGGGQSEWQQRRAAAAGAEREAARQRKREATARAKQDEREREQAQRQQSVDDDNAAA CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AAHIAELGRNLLLNVLGLPAFTVAALEVVPEQSIFQPGSLAVAGRAPDWEQYKPPAPGRA HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCEEEECCCCCHHCCCCCCCCCH SRLVGGSGRYQREFDAARSKWEADTAEFQRVETDRLRQLAAARTRHGQQVAAALDRAAAH HHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC NARIAAQWAACLDGDPEAVEWFVGQALAATSYPDGFPVARKVAYRPQEHDIVIEIEFPRR CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEEECCCH SVIPEIRGYKLFKTAPEVRPVKWKESEVKKLYAQLVAWITLRIVHEVFEATKALDLIEVV HCCCHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFNGTVIDVAPTTGKDTLYHLVSLEPERSLFEASLELDRVTDPIGCLRELGAKVSPNPYD EECCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC LEAVKPVVTFDLRRFRLANDAAELADLDSRPNLMELTPSEFEKLIEKLLKAMGIEAYRTI HHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHC DSRDDGIDVVATKDDIIFGGVCLVQAKRTKNRVELGTVQAVAGSMNDHNAATPDVQQQSV CCCCCCEEEEEECCCEEECCEEEEEEHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH QARGRSNSRQRLGGGQGISRGGNAQTVSVQIAEVGDRGDAGQLCDGNGGHRLVEAFLRAT HHHCCCCCHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH LVSLSLQQQLLPMGDIARPPVDGKCGPHLAVAVAGARLLQLSAQRRGPLEGSVVDGGVPV HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCE AVTPSRATALARPSRSAPSVLASNHSARATISAGRPATAARARAATVSADLASNRRSCPT EECCCHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC STAR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA