Click here to switch to the map view.

The map label for this gene is hcr [C]

Identifier: 158318706

GI number: 158318706

Start: 8499827

End: 8500900

Strand: Reverse

Name: hcr [C]

Synonym: Franean1_6975

Alternate gene names: 158318706

Gene position: 8500900-8499827 (Counterclockwise)

Preceding gene: 158318707

Following gene: 158318705

Centisome position: 94.64

GC content: 71.6

Gene sequence:

>1074_bases
GTGACCGTCGGAAGAATCCTGTTGGATGCCGCGGCGTCGTTGACCACGCCACTGCTGCCCGATGATTACCTCGGACTGAT
TGATCCGCTCTGGTCGCGGCGCGGGTTGCGGGGGCGGGTCGAGACTGTCCGGCGGGAGGCCGCCGGCGTCGCCACGCTGG
TGATCCGTCCCGGCGCGGGCTGGAACGAGCATCGCGCGGGTCAGTACGTCCGGATCGGCGTGAATGTCGACGGAGTGTGG
CACTGGCGCCCCTACTCGGTGTCCTCGGCCCCGGGGGATCCCGGCGGTGTCATCTCGATCACGGTCAAGGCCCTCCCGGA
CGGGAAGCTGTCCGGTCGTCTCGTGGAACGGGTCCGGCCTGGCGCGATTGTGCGCCTGGAGAAACCACGGGGGTGTTTCG
TGCTGCCGCAGGTGCTTCCGTCGCGGCTGCTGTTCGTGACCGCTGGCAGCGGCATCACGCCGGTGATGTCGATGCTGCGC
GGCTTTGCGCAGGATGGCGAGATGCCGGACGCGGTCGTCGTGCATTCGGCGCCGACGCGGGACGATGTCATCTTCGGCAC
CGAGCTACGAGAGCTCGCGGCCCGGTTCCCCACCCTTCGGCTTCACGAGCACCACACCAGGGTGCCCGGCGGGCCCGCCC
GGCGTCTCACCATGGCGGCGCTGCCCGCGATCTGCCCGGACTGGGCGGAACGGCCGGCCTGGGTCTGCGGACCCCCAGGG
ATGCTCGCGGACGCCGAGGCCTGGTGGCGTCGGGCGGGGATCGCGGACCGCCTGAGGGTGGAGCGGTTCCGTCCCGCCGG
GGCGCCCGGTGGCGGGACCGGAGGGCGGGTCCGGTTCGCCAGGAGTGGCCGGCAGGCTCAGGCTGGCGGCAACAAATCGC
TGCTGGCGGTGGGTGAGGACGCCGGCGTCCTCATGCCGAGCGGCTGTCGCATGGGTATCTGCCACAGCTGTCTGGCCCAG
CTCACCTCGGGCCGGGTGCGGGACCTGCGCACCGGGCGGGAGCACGGTGCGCAGGGCGAACTCGTCCAGACCTGCGTGTC
GGGCGCGGCCGGCGACGTCGAGATCGACCTTTGA

Upstream 100 bases:

>100_bases
GGTATAGGTCTGAAATCACGCCGAGCAAGCTCTCTCCTTGTTCCGTGCTCCCGGCGAGGTCAGCGTCACACCCGAAAATC
GGCAATCGGGAGAAAGCAGT

Downstream 100 bases:

>100_bases
AGGGGTGGGCAATGGCCAGGCGGACGGCACTCACCGCGGCCGAGGCCGACGAGTTCGGCCGCGCGCTCGACCAGCTCCGG
GAGGAGGTTCTCGCCGGCCG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MTVGRILLDAAASLTTPLLPDDYLGLIDPLWSRRGLRGRVETVRREAAGVATLVIRPGAGWNEHRAGQYVRIGVNVDGVW
HWRPYSVSSAPGDPGGVISITVKALPDGKLSGRLVERVRPGAIVRLEKPRGCFVLPQVLPSRLLFVTAGSGITPVMSMLR
GFAQDGEMPDAVVVHSAPTRDDVIFGTELRELAARFPTLRLHEHHTRVPGGPARRLTMAALPAICPDWAERPAWVCGPPG
MLADAEAWWRRAGIADRLRVERFRPAGAPGGGTGGRVRFARSGRQAQAGGNKSLLAVGEDAGVLMPSGCRMGICHSCLAQ
LTSGRVRDLRTGREHGAQGELVQTCVSGAAGDVEIDL

Sequences:

>Translated_357_residues
MTVGRILLDAAASLTTPLLPDDYLGLIDPLWSRRGLRGRVETVRREAAGVATLVIRPGAGWNEHRAGQYVRIGVNVDGVW
HWRPYSVSSAPGDPGGVISITVKALPDGKLSGRLVERVRPGAIVRLEKPRGCFVLPQVLPSRLLFVTAGSGITPVMSMLR
GFAQDGEMPDAVVVHSAPTRDDVIFGTELRELAARFPTLRLHEHHTRVPGGPARRLTMAALPAICPDWAERPAWVCGPPG
MLADAEAWWRRAGIADRLRVERFRPAGAPGGGTGGRVRFARSGRQAQAGGNKSLLAVGEDAGVLMPSGCRMGICHSCLAQ
LTSGRVRDLRTGREHGAQGELVQTCVSGAAGDVEIDL
>Mature_356_residues
TVGRILLDAAASLTTPLLPDDYLGLIDPLWSRRGLRGRVETVRREAAGVATLVIRPGAGWNEHRAGQYVRIGVNVDGVWH
WRPYSVSSAPGDPGGVISITVKALPDGKLSGRLVERVRPGAIVRLEKPRGCFVLPQVLPSRLLFVTAGSGITPVMSMLRG
FAQDGEMPDAVVVHSAPTRDDVIFGTELRELAARFPTLRLHEHHTRVPGGPARRLTMAALPAICPDWAERPAWVCGPPGM
LADAEAWWRRAGIADRLRVERFRPAGAPGGGTGGRVRFARSGRQAQAGGNKSLLAVGEDAGVLMPSGCRMGICHSCLAQL
TSGRVRDLRTGREHGAQGELVQTCVSGAAGDVEIDL

Specific function: This is an electron transfer partner for desA3 [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787098, Length=289, Percent_Identity=29.0657439446367, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787658, Length=318, Percent_Identity=25.7861635220126, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38141; Mature: 38010

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGRILLDAAASLTTPLLPDDYLGLIDPLWSRRGLRGRVETVRREAAGVATLVIRPGAG
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEECCCC
WNEHRAGQYVRIGVNVDGVWHWRPYSVSSAPGDPGGVISITVKALPDGKLSGRLVERVRP
CCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCC
GAIVRLEKPRGCFVLPQVLPSRLLFVTAGSGITPVMSMLRGFAQDGEMPDAVVVHSAPTR
CEEEEEECCCCCEEEHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCC
DDVIFGTELRELAARFPTLRLHEHHTRVPGGPARRLTMAALPAICPDWAERPAWVCGPPG
CCEEECHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCEEECCCC
MLADAEAWWRRAGIADRLRVERFRPAGAPGGGTGGRVRFARSGRQAQAGGNKSLLAVGED
CCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCC
AGVLMPSGCRMGICHSCLAQLTSGRVRDLRTGREHGAQGELVQTCVSGAAGDVEIDL
CCEEECCCCCHHHHHHHHHHHHCCHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure 
TVGRILLDAAASLTTPLLPDDYLGLIDPLWSRRGLRGRVETVRREAAGVATLVIRPGAG
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEECCCC
WNEHRAGQYVRIGVNVDGVWHWRPYSVSSAPGDPGGVISITVKALPDGKLSGRLVERVRP
CCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCC
GAIVRLEKPRGCFVLPQVLPSRLLFVTAGSGITPVMSMLRGFAQDGEMPDAVVVHSAPTR
CEEEEEECCCCCEEEHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCC
DDVIFGTELRELAARFPTLRLHEHHTRVPGGPARRLTMAALPAICPDWAERPAWVCGPPG
CCEEECHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCEEECCCC
MLADAEAWWRRAGIADRLRVERFRPAGAPGGGTGGRVRFARSGRQAQAGGNKSLLAVGED
CCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCC
AGVLMPSGCRMGICHSCLAQLTSGRVRDLRTGREHGAQGELVQTCVSGAAGDVEIDL
CCEEECCCCCHHHHHHHHHHHHCCHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]