| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318707
Identifier: 158318707
GI number: 158318707
Start: 8501108
End: 8501401
Strand: Reverse
Name: 158318707
Synonym: Franean1_6976
Alternate gene names: NA
Gene position: 8501401-8501108 (Counterclockwise)
Preceding gene: 158318708
Following gene: 158318706
Centisome position: 94.65
GC content: 65.65
Gene sequence:
>294_bases TTGCCCGTAGATCAGCACGTCGTGAGGTCGACCCGCACAAGTCGAACCTGGACGGCGCTGATTCTGTTCGTCGTAGTCCT GATTCTCCTGCTGGTGTTCATCCTGCAGAACGGCCAGAGCGTCAAGGTGTCGTACCTGGGCGCTGAGGGAAGTATGCCCC TCGCGGTCGCGATGCTGTTCGCCGCGGCCGGCGGGGCGCTGCTGGTCGCGATCCCCGGTGTGGGTCGCATGGTCCAACTG CGCCGGGTGGCACGCCGTCACCGAAAGGCCGAGAACATCCCGCCGCCACCGTGA
Upstream 100 bases:
>100_bases CCTATATTTCCCGAATCTGGGTAGAAGATCGCCATAAATGCTATTCTGGCCACAGGCCCGGGACCGCCCGACCCGAGCTC TCCCCCTCGGTGACTCGCCG
Downstream 100 bases:
>100_bases CCGACGACGAGCGAGAGTTCGGCACGCGGGCCGCCTGGTCGCGGAAAGTGACGCGCGGGTGTAGCGTTCGGGCGAGCGAG CGAGCGGGCGCGCCGGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MPVDQHVVRSTRTSRTWTALILFVVVLILLLVFILQNGQSVKVSYLGAEGSMPLAVAMLFAAAGGALLVAIPGVGRMVQL RRVARRHRKAENIPPPP
Sequences:
>Translated_97_residues MPVDQHVVRSTRTSRTWTALILFVVVLILLLVFILQNGQSVKVSYLGAEGSMPLAVAMLFAAAGGALLVAIPGVGRMVQL RRVARRHRKAENIPPPP >Mature_96_residues PVDQHVVRSTRTSRTWTALILFVVVLILLLVFILQNGQSVKVSYLGAEGSMPLAVAMLFAAAGGALLVAIPGVGRMVQLR RVARRHRKAENIPPPP
Specific function: Unknown
COG id: COG5416
COG function: function code S; Uncharacterized integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10510; Mature: 10379
Theoretical pI: Translated: 12.41; Mature: 12.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDQHVVRSTRTSRTWTALILFVVVLILLLVFILQNGQSVKVSYLGAEGSMPLAVAMLF CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHH AAAGGALLVAIPGVGRMVQLRRVARRHRKAENIPPPP HHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PVDQHVVRSTRTSRTWTALILFVVVLILLLVFILQNGQSVKVSYLGAEGSMPLAVAMLF CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHH AAAGGALLVAIPGVGRMVQLRRVARRHRKAENIPPPP HHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA