| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318703
Identifier: 158318703
GI number: 158318703
Start: 8497587
End: 8497871
Strand: Reverse
Name: 158318703
Synonym: Franean1_6972
Alternate gene names: NA
Gene position: 8497871-8497587 (Counterclockwise)
Preceding gene: 158318705
Following gene: 158318700
Centisome position: 94.61
GC content: 65.26
Gene sequence:
>285_bases GTGAGCGGAAAGGTAAACTGGCTCGTCTGTAAGGTGGGCTGCATCGAATGCGGCATGATTGAGGACCCTGTGCTGATGAT TATCGGAGTTTATGCGGACGAACAGCAGGCCGTTTCCGCCGCGCGCGACGCCGCCCACACGATCGCGCAACGCTGGGGGA TGACCAACCCCGAAGAGCCCTACCGGGTGAACGCGGCCCAGATGCTGGGCTCGGGGATGGGCGCCGGCTGGATGTGGACG CCCGCGGACCACGAGCAGGTCTACGCGGTGCGGGTCCCGTCCTGA
Upstream 100 bases:
>100_bases GGCTCATGGTGCTGGCTGAGCGCTTTCCTGAGGCCGCTGCGGGCTGTTCCGGCAGTCTTGTCGTGACCAGTTCTGGTGGG CGTCGCGGAAGGGAATTCCG
Downstream 100 bases:
>100_bases CAGGTCGGTCGCACTCCATCCCGGCCGGGGACCATCCGCCGAAGCGGGTCCGGACGGTCCTCAGGCGGTCTGCGGGCTGA GCCCGACCGCCTCAATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSGKVNWLVCKVGCIECGMIEDPVLMIIGVYADEQQAVSAARDAAHTIAQRWGMTNPEEPYRVNAAQMLGSGMGAGWMWT PADHEQVYAVRVPS
Sequences:
>Translated_94_residues MSGKVNWLVCKVGCIECGMIEDPVLMIIGVYADEQQAVSAARDAAHTIAQRWGMTNPEEPYRVNAAQMLGSGMGAGWMWT PADHEQVYAVRVPS >Mature_93_residues SGKVNWLVCKVGCIECGMIEDPVLMIIGVYADEQQAVSAARDAAHTIAQRWGMTNPEEPYRVNAAQMLGSGMGAGWMWTP ADHEQVYAVRVPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10254; Mature: 10123
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKVNWLVCKVGCIECGMIEDPVLMIIGVYADEQQAVSAARDAAHTIAQRWGMTNPEEP CCCCCEEEEEEECCEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC YRVNAAQMLGSGMGAGWMWTPADHEQVYAVRVPS EEECHHHHHCCCCCCCCEECCCCCCEEEEEECCC >Mature Secondary Structure SGKVNWLVCKVGCIECGMIEDPVLMIIGVYADEQQAVSAARDAAHTIAQRWGMTNPEEP CCCCEEEEEEECCEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC YRVNAAQMLGSGMGAGWMWTPADHEQVYAVRVPS EEECHHHHHCCCCCCCCEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA