| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318677
Identifier: 158318677
GI number: 158318677
Start: 8462749
End: 8463657
Strand: Reverse
Name: 158318677
Synonym: Franean1_6945
Alternate gene names: NA
Gene position: 8463657-8462749 (Counterclockwise)
Preceding gene: 158318682
Following gene: 158318675
Centisome position: 94.23
GC content: 75.58
Gene sequence:
>909_bases GTGGCCGGCGAATCCGCGGCGGCCACGATTCGGAGGTGGCACATGAGACGACGATGGTCCGCGCACATTCTGATCGGGAC GGCGATCGTGCTGGCTGTCGGCACCAGCGGCACCGCGCTGGCGATGGCCGCCCAGCCCGCTGACCCGACCGAGTCCGGCA CGGAGGGCGGCGCTCCCGCACTCCCACCGGACGACGCCTTCACCCGGTGCCTCGTGGCGAACGGGGCCCAGGTGCACACC GACCCACCGGTGGACGGCCGACGATCGGTGCGGGTGACGCTCGACCCGGCCCATCAGTCTCCGGCGCTGGACACCTGCCA GCGGTTCGCACCCGCCCCCGGCACCATCGGCGGCGGCCCGGCCCCGATCCAGCCGTTGTCCGCGGAACAGAACGCGACGG TGACGGAGTGTCTGCGGGCCGAAGGAGTGACCTTCCCCGCTCCCGGGACCACCCAGGTGCTGGGCCTGCCGCCGGCGGAC GAGCCGATCCCTCCGGGCTCCGCCCCCGCCGCCCCTGCTCCCGGCGCCGGGAGCGGCAGCGGCAGCGGATCCGGCACCGG CGCGGCACCGGCCCCCGGCTCTGGAGGCGCCCCCGTCCTGGTTCCCGGTCCGGTGGTCAGCGGAGGTCCGGGCGGGTACG GCGGCCTGGTGATCAGCAGTGAAGCGGGTGCCGGTGGCGAAGCGGCACCCGGCGGCCCCGACGTGCTCGGTGACGCACCT GACGTGCCCGGTCTGCCCGGTGACGCACCTGGCGGACCCGGCGCGTCCGGCGACGCGCCTGACGCGAAGGTTCTCGGCGC GCTCGGCCGGTGCGCACAGGCCGCCGGCCTGCCTGGTCTCGCCCTGGAGACGCACTCGGCGGACAGGACCACCACAGTGG TGGCGATGGCGGTCGAGCCCCGCTCGTAG
Upstream 100 bases:
>100_bases ACCGCCTCTCCGCTCACGTCGATCATCGGCAGCGGGCCATAAAGAAAGCGTAAGGGGCGACGCTTACGGAACCCGGATCG CCCGTTCACTAGATCTGGTC
Downstream 100 bases:
>100_bases GCAGGACAGCGCTCCCCGGTCGCGTCAGGCGGGCGCGGCAGCCGTCGCCCGCCTGACGCGACCACGACCGGCGCCGGCCC GGCCCGGCGATCCGGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAGESAAATIRRWHMRRRWSAHILIGTAIVLAVGTSGTALAMAAQPADPTESGTEGGAPALPPDDAFTRCLVANGAQVHT DPPVDGRRSVRVTLDPAHQSPALDTCQRFAPAPGTIGGGPAPIQPLSAEQNATVTECLRAEGVTFPAPGTTQVLGLPPAD EPIPPGSAPAAPAPGAGSGSGSGSGTGAAPAPGSGGAPVLVPGPVVSGGPGGYGGLVISSEAGAGGEAAPGGPDVLGDAP DVPGLPGDAPGGPGASGDAPDAKVLGALGRCAQAAGLPGLALETHSADRTTTVVAMAVEPRS
Sequences:
>Translated_302_residues MAGESAAATIRRWHMRRRWSAHILIGTAIVLAVGTSGTALAMAAQPADPTESGTEGGAPALPPDDAFTRCLVANGAQVHT DPPVDGRRSVRVTLDPAHQSPALDTCQRFAPAPGTIGGGPAPIQPLSAEQNATVTECLRAEGVTFPAPGTTQVLGLPPAD EPIPPGSAPAAPAPGAGSGSGSGSGTGAAPAPGSGGAPVLVPGPVVSGGPGGYGGLVISSEAGAGGEAAPGGPDVLGDAP DVPGLPGDAPGGPGASGDAPDAKVLGALGRCAQAAGLPGLALETHSADRTTTVVAMAVEPRS >Mature_301_residues AGESAAATIRRWHMRRRWSAHILIGTAIVLAVGTSGTALAMAAQPADPTESGTEGGAPALPPDDAFTRCLVANGAQVHTD PPVDGRRSVRVTLDPAHQSPALDTCQRFAPAPGTIGGGPAPIQPLSAEQNATVTECLRAEGVTFPAPGTTQVLGLPPADE PIPPGSAPAAPAPGAGSGSGSGSGTGAAPAPGSGGAPVLVPGPVVSGGPGGYGGLVISSEAGAGGEAAPGGPDVLGDAPD VPGLPGDAPGGPGASGDAPDAKVLGALGRCAQAAGLPGLALETHSADRTTTVVAMAVEPRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28865; Mature: 28734
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGESAAATIRRWHMRRRWSAHILIGTAIVLAVGTSGTALAMAAQPADPTESGTEGGAPA CCCCHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC LPPDDAFTRCLVANGAQVHTDPPVDGRRSVRVTLDPAHQSPALDTCQRFAPAPGTIGGGP CCCCHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCC APIQPLSAEQNATVTECLRAEGVTFPAPGTTQVLGLPPADEPIPPGSAPAAPAPGAGSGS CCCCCCCCCCCCHHHHHHHHCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GSGSGTGAAPAPGSGGAPVLVPGPVVSGGPGGYGGLVISSEAGAGGEAAPGGPDVLGDAP CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC DVPGLPGDAPGGPGASGDAPDAKVLGALGRCAQAAGLPGLALETHSADRTTTVVAMAVEP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEEECC RS CC >Mature Secondary Structure AGESAAATIRRWHMRRRWSAHILIGTAIVLAVGTSGTALAMAAQPADPTESGTEGGAPA CCCHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC LPPDDAFTRCLVANGAQVHTDPPVDGRRSVRVTLDPAHQSPALDTCQRFAPAPGTIGGGP CCCCHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCC APIQPLSAEQNATVTECLRAEGVTFPAPGTTQVLGLPPADEPIPPGSAPAAPAPGAGSGS CCCCCCCCCCCCHHHHHHHHCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GSGSGTGAAPAPGSGGAPVLVPGPVVSGGPGGYGGLVISSEAGAGGEAAPGGPDVLGDAP CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC DVPGLPGDAPGGPGASGDAPDAKVLGALGRCAQAAGLPGLALETHSADRTTTVVAMAVEP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEEECC RS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA