| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mdoC [H]
Identifier: 158318682
GI number: 158318682
Start: 8467701
End: 8469137
Strand: Reverse
Name: mdoC [H]
Synonym: Franean1_6950
Alternate gene names: 158318682
Gene position: 8469137-8467701 (Counterclockwise)
Preceding gene: 158318684
Following gene: 158318677
Centisome position: 94.29
GC content: 70.56
Gene sequence:
>1437_bases GTGGGGCAGCGGGAGGCAGTACCCTCCGCGGGAGCATCCACCGCGGGCGTGCGCTACCACCACCTGGACGCGCTGCGCGG CGTCATCATGCTGATCGGCGTGTTCGTCCACGTGGCCACGCTCGGGGACGACCCCGTCTTCGACGGGATAGCGCGTGCCT CCGGCCTCTTCCGGATGGAGGCCTTCTTCGTCATCTCGGGTTTTCTCTCCGCGATGCTCACCGCGAAATACGGGCCCGGG CTCGCCCTCCGGCGCAGGCTGGCGGCGGTGGGCGTGCCGCTGGTGGCGACGCTCGTGCTGTTCAACCCGCCGACACTGTG GCTGATCTCCCGCTTCCACAACCGTAGCGACATCTCGTTCGCCGACTTCCTGCGAGCCTGCATGGCTCCCGCGTTCGAAG GCCGGCTGAACTGGTACCTGCACCTGTGGTTCCTGCTGGTGCTCCTCGGGTACGCGCTCCTCACCCCCGCGGCGGTGAAG CTGCTGAGCAGGTTCGTCTCCACCCGGTGCTATCAACAGGCCACCGCGGGGCGGCTCCGCGCCATGACGGCGATCACGCT TCTCGTGCTGGGCACGATGGCGGCCGGCAGGATCGGCTGGGGCGAGGCCATCCGGCCCGTCATCGGGTCGGGATTTCATG CGGACCTGGTCCGCCGCACCCTGGAGTTCCTGCCGTTCTTCCTACTCGGTCTCCTGCTGTTTCTGGACAGGGGCCGGCTC GTGCCGTCATTCCAGCGGCCCGCGCCGGTTCTTCTCGCGGTGTCGGGGCTCGTCCTGCTGGCATCGTGGCACGGGTGGGT GGACATGCTCGCGATGGGCACCGGCCGGGTGCTGGCCGAGACGATGTTCGCCATTCCGGTGATCGCGACGATTTTCGCCG CGGCCAGTCGGTGGGGGTCGCGCCCGAGTCCCGCCCTGCGTTATCTGGCGGACGCCTCGTACTCGGTCTACCTGCTGCAT TTCTTCTGGATCTACGTGTTCGCGACCCTGCTCGGTTTCGATCCAGGTCTCGGTTCGGCACGGATGATGCTGCTGGTCGT CGCCACCTACGCGGCCACCTTCGCGACCCACCATCTCGTGATTCTCCGGTTCCCGCTCCTCCGGCGAATCTTCAACGGCA GGTTCCCGTCGAAGGCCCGCCCCGGGTCGGAACCGCCCGCGGCCGTGCCGGCGGCTCCGTCCGTGGCGGTGCCGGCGGTT CCGCCGGTTCTCACCTCGACGCGTGGCGGGTGCGCCGCTGGTCGGGCACGGCCGCGGGCCGGGAGCGCCTCAGAGGATCC GAGCCAGGCGGGCGCACCGGCCCAGCCGACACGGGCATCCCCGGCACCGCGCTGTACGTCCGGTGCCCGCCCGGCGCGGC ACCCGCGGCGGCGCCCGGCACCGAGCCCATCGGGGACGGTGAGCCCATCGGGGACGCCGAGTCCGCCGGGCGCGTAG
Upstream 100 bases:
>100_bases CCGAAGCGTAGTATTTCGCGAGCCCTTGCGCTTCCTCCCGACGTCATCCGGCGCCGGGAAAGCGTGTATCCGTCGGCCGG AAACGGGAAGGCAGGGACTC
Downstream 100 bases:
>100_bases GCCGTCCCCCGGGGCGTGCCGCGGGCCGGGAGAGGAACCCTCCCAGCCAGGACGGCGCCGCCGCCGACTTGAGGGCGAGC GCGGGCGATTCGACGAGGTG
Product: glucans biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MGQREAVPSAGASTAGVRYHHLDALRGVIMLIGVFVHVATLGDDPVFDGIARASGLFRMEAFFVISGFLSAMLTAKYGPG LALRRRLAAVGVPLVATLVLFNPPTLWLISRFHNRSDISFADFLRACMAPAFEGRLNWYLHLWFLLVLLGYALLTPAAVK LLSRFVSTRCYQQATAGRLRAMTAITLLVLGTMAAGRIGWGEAIRPVIGSGFHADLVRRTLEFLPFFLLGLLLFLDRGRL VPSFQRPAPVLLAVSGLVLLASWHGWVDMLAMGTGRVLAETMFAIPVIATIFAAASRWGSRPSPALRYLADASYSVYLLH FFWIYVFATLLGFDPGLGSARMMLLVVATYAATFATHHLVILRFPLLRRIFNGRFPSKARPGSEPPAAVPAAPSVAVPAV PPVLTSTRGGCAAGRARPRAGSASEDPSQAGAPAQPTRASPAPRCTSGARPARHPRRRPAPSPSGTVSPSGTPSPPGA
Sequences:
>Translated_478_residues MGQREAVPSAGASTAGVRYHHLDALRGVIMLIGVFVHVATLGDDPVFDGIARASGLFRMEAFFVISGFLSAMLTAKYGPG LALRRRLAAVGVPLVATLVLFNPPTLWLISRFHNRSDISFADFLRACMAPAFEGRLNWYLHLWFLLVLLGYALLTPAAVK LLSRFVSTRCYQQATAGRLRAMTAITLLVLGTMAAGRIGWGEAIRPVIGSGFHADLVRRTLEFLPFFLLGLLLFLDRGRL VPSFQRPAPVLLAVSGLVLLASWHGWVDMLAMGTGRVLAETMFAIPVIATIFAAASRWGSRPSPALRYLADASYSVYLLH FFWIYVFATLLGFDPGLGSARMMLLVVATYAATFATHHLVILRFPLLRRIFNGRFPSKARPGSEPPAAVPAAPSVAVPAV PPVLTSTRGGCAAGRARPRAGSASEDPSQAGAPAQPTRASPAPRCTSGARPARHPRRRPAPSPSGTVSPSGTPSPPGA >Mature_477_residues GQREAVPSAGASTAGVRYHHLDALRGVIMLIGVFVHVATLGDDPVFDGIARASGLFRMEAFFVISGFLSAMLTAKYGPGL ALRRRLAAVGVPLVATLVLFNPPTLWLISRFHNRSDISFADFLRACMAPAFEGRLNWYLHLWFLLVLLGYALLTPAAVKL LSRFVSTRCYQQATAGRLRAMTAITLLVLGTMAAGRIGWGEAIRPVIGSGFHADLVRRTLEFLPFFLLGLLLFLDRGRLV PSFQRPAPVLLAVSGLVLLASWHGWVDMLAMGTGRVLAETMFAIPVIATIFAAASRWGSRPSPALRYLADASYSVYLLHF FWIYVFATLLGFDPGLGSARMMLLVVATYAATFATHHLVILRFPLLRRIFNGRFPSKARPGSEPPAAVPAAPSVAVPAVP PVLTSTRGGCAAGRARPRAGSASEDPSQAGAPAQPTRASPAPRCTSGARPARHPRRRPAPSPSGTVSPSGTPSPPGA
Specific function: Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family. OpgC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787285, Length=408, Percent_Identity=26.4705882352941, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: 2.1.-.- [C]
Molecular weight: Translated: 51134; Mature: 51002
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQREAVPSAGASTAGVRYHHLDALRGVIMLIGVFVHVATLGDDPVFDGIARASGLFRME CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AFFVISGFLSAMLTAKYGPGLALRRRLAAVGVPLVATLVLFNPPTLWLISRFHNRSDISF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHCCCCCCCH ADFLRACMAPAFEGRLNWYLHLWFLLVLLGYALLTPAAVKLLSRFVSTRCYQQATAGRLR HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMTAITLLVLGTMAAGRIGWGEAIRPVIGSGFHADLVRRTLEFLPFFLLGLLLFLDRGRL HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPSFQRPAPVLLAVSGLVLLASWHGWVDMLAMGTGRVLAETMFAIPVIATIFAAASRWGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC RPSPALRYLADASYSVYLLHFFWIYVFATLLGFDPGLGSARMMLLVVATYAATFATHHLV CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILRFPLLRRIFNGRFPSKARPGSEPPAAVPAAPSVAVPAVPPVLTSTRGGCAAGRARPRA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC GSASEDPSQAGAPAQPTRASPAPRCTSGARPARHPRRRPAPSPSGTVSPSGTPSPPGA CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GQREAVPSAGASTAGVRYHHLDALRGVIMLIGVFVHVATLGDDPVFDGIARASGLFRME CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AFFVISGFLSAMLTAKYGPGLALRRRLAAVGVPLVATLVLFNPPTLWLISRFHNRSDISF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHCCCCCCCH ADFLRACMAPAFEGRLNWYLHLWFLLVLLGYALLTPAAVKLLSRFVSTRCYQQATAGRLR HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMTAITLLVLGTMAAGRIGWGEAIRPVIGSGFHADLVRRTLEFLPFFLLGLLLFLDRGRL HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPSFQRPAPVLLAVSGLVLLASWHGWVDMLAMGTGRVLAETMFAIPVIATIFAAASRWGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC RPSPALRYLADASYSVYLLHFFWIYVFATLLGFDPGLGSARMMLLVVATYAATFATHHLV CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILRFPLLRRIFNGRFPSKARPGSEPPAAVPAAPSVAVPAVPPVLTSTRGGCAAGRARPRA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC GSASEDPSQAGAPAQPTRASPAPRCTSGARPARHPRRRPAPSPSGTVSPSGTPSPPGA CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA