Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is mdoC [H]

Identifier: 158318682

GI number: 158318682

Start: 8467701

End: 8469137

Strand: Reverse

Name: mdoC [H]

Synonym: Franean1_6950

Alternate gene names: 158318682

Gene position: 8469137-8467701 (Counterclockwise)

Preceding gene: 158318684

Following gene: 158318677

Centisome position: 94.29

GC content: 70.56

Gene sequence:

>1437_bases
GTGGGGCAGCGGGAGGCAGTACCCTCCGCGGGAGCATCCACCGCGGGCGTGCGCTACCACCACCTGGACGCGCTGCGCGG
CGTCATCATGCTGATCGGCGTGTTCGTCCACGTGGCCACGCTCGGGGACGACCCCGTCTTCGACGGGATAGCGCGTGCCT
CCGGCCTCTTCCGGATGGAGGCCTTCTTCGTCATCTCGGGTTTTCTCTCCGCGATGCTCACCGCGAAATACGGGCCCGGG
CTCGCCCTCCGGCGCAGGCTGGCGGCGGTGGGCGTGCCGCTGGTGGCGACGCTCGTGCTGTTCAACCCGCCGACACTGTG
GCTGATCTCCCGCTTCCACAACCGTAGCGACATCTCGTTCGCCGACTTCCTGCGAGCCTGCATGGCTCCCGCGTTCGAAG
GCCGGCTGAACTGGTACCTGCACCTGTGGTTCCTGCTGGTGCTCCTCGGGTACGCGCTCCTCACCCCCGCGGCGGTGAAG
CTGCTGAGCAGGTTCGTCTCCACCCGGTGCTATCAACAGGCCACCGCGGGGCGGCTCCGCGCCATGACGGCGATCACGCT
TCTCGTGCTGGGCACGATGGCGGCCGGCAGGATCGGCTGGGGCGAGGCCATCCGGCCCGTCATCGGGTCGGGATTTCATG
CGGACCTGGTCCGCCGCACCCTGGAGTTCCTGCCGTTCTTCCTACTCGGTCTCCTGCTGTTTCTGGACAGGGGCCGGCTC
GTGCCGTCATTCCAGCGGCCCGCGCCGGTTCTTCTCGCGGTGTCGGGGCTCGTCCTGCTGGCATCGTGGCACGGGTGGGT
GGACATGCTCGCGATGGGCACCGGCCGGGTGCTGGCCGAGACGATGTTCGCCATTCCGGTGATCGCGACGATTTTCGCCG
CGGCCAGTCGGTGGGGGTCGCGCCCGAGTCCCGCCCTGCGTTATCTGGCGGACGCCTCGTACTCGGTCTACCTGCTGCAT
TTCTTCTGGATCTACGTGTTCGCGACCCTGCTCGGTTTCGATCCAGGTCTCGGTTCGGCACGGATGATGCTGCTGGTCGT
CGCCACCTACGCGGCCACCTTCGCGACCCACCATCTCGTGATTCTCCGGTTCCCGCTCCTCCGGCGAATCTTCAACGGCA
GGTTCCCGTCGAAGGCCCGCCCCGGGTCGGAACCGCCCGCGGCCGTGCCGGCGGCTCCGTCCGTGGCGGTGCCGGCGGTT
CCGCCGGTTCTCACCTCGACGCGTGGCGGGTGCGCCGCTGGTCGGGCACGGCCGCGGGCCGGGAGCGCCTCAGAGGATCC
GAGCCAGGCGGGCGCACCGGCCCAGCCGACACGGGCATCCCCGGCACCGCGCTGTACGTCCGGTGCCCGCCCGGCGCGGC
ACCCGCGGCGGCGCCCGGCACCGAGCCCATCGGGGACGGTGAGCCCATCGGGGACGCCGAGTCCGCCGGGCGCGTAG

Upstream 100 bases:

>100_bases
CCGAAGCGTAGTATTTCGCGAGCCCTTGCGCTTCCTCCCGACGTCATCCGGCGCCGGGAAAGCGTGTATCCGTCGGCCGG
AAACGGGAAGGCAGGGACTC

Downstream 100 bases:

>100_bases
GCCGTCCCCCGGGGCGTGCCGCGGGCCGGGAGAGGAACCCTCCCAGCCAGGACGGCGCCGCCGCCGACTTGAGGGCGAGC
GCGGGCGATTCGACGAGGTG

Product: glucans biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MGQREAVPSAGASTAGVRYHHLDALRGVIMLIGVFVHVATLGDDPVFDGIARASGLFRMEAFFVISGFLSAMLTAKYGPG
LALRRRLAAVGVPLVATLVLFNPPTLWLISRFHNRSDISFADFLRACMAPAFEGRLNWYLHLWFLLVLLGYALLTPAAVK
LLSRFVSTRCYQQATAGRLRAMTAITLLVLGTMAAGRIGWGEAIRPVIGSGFHADLVRRTLEFLPFFLLGLLLFLDRGRL
VPSFQRPAPVLLAVSGLVLLASWHGWVDMLAMGTGRVLAETMFAIPVIATIFAAASRWGSRPSPALRYLADASYSVYLLH
FFWIYVFATLLGFDPGLGSARMMLLVVATYAATFATHHLVILRFPLLRRIFNGRFPSKARPGSEPPAAVPAAPSVAVPAV
PPVLTSTRGGCAAGRARPRAGSASEDPSQAGAPAQPTRASPAPRCTSGARPARHPRRRPAPSPSGTVSPSGTPSPPGA

Sequences:

>Translated_478_residues
MGQREAVPSAGASTAGVRYHHLDALRGVIMLIGVFVHVATLGDDPVFDGIARASGLFRMEAFFVISGFLSAMLTAKYGPG
LALRRRLAAVGVPLVATLVLFNPPTLWLISRFHNRSDISFADFLRACMAPAFEGRLNWYLHLWFLLVLLGYALLTPAAVK
LLSRFVSTRCYQQATAGRLRAMTAITLLVLGTMAAGRIGWGEAIRPVIGSGFHADLVRRTLEFLPFFLLGLLLFLDRGRL
VPSFQRPAPVLLAVSGLVLLASWHGWVDMLAMGTGRVLAETMFAIPVIATIFAAASRWGSRPSPALRYLADASYSVYLLH
FFWIYVFATLLGFDPGLGSARMMLLVVATYAATFATHHLVILRFPLLRRIFNGRFPSKARPGSEPPAAVPAAPSVAVPAV
PPVLTSTRGGCAAGRARPRAGSASEDPSQAGAPAQPTRASPAPRCTSGARPARHPRRRPAPSPSGTVSPSGTPSPPGA
>Mature_477_residues
GQREAVPSAGASTAGVRYHHLDALRGVIMLIGVFVHVATLGDDPVFDGIARASGLFRMEAFFVISGFLSAMLTAKYGPGL
ALRRRLAAVGVPLVATLVLFNPPTLWLISRFHNRSDISFADFLRACMAPAFEGRLNWYLHLWFLLVLLGYALLTPAAVKL
LSRFVSTRCYQQATAGRLRAMTAITLLVLGTMAAGRIGWGEAIRPVIGSGFHADLVRRTLEFLPFFLLGLLLFLDRGRLV
PSFQRPAPVLLAVSGLVLLASWHGWVDMLAMGTGRVLAETMFAIPVIATIFAAASRWGSRPSPALRYLADASYSVYLLHF
FWIYVFATLLGFDPGLGSARMMLLVVATYAATFATHHLVILRFPLLRRIFNGRFPSKARPGSEPPAAVPAAPSVAVPAVP
PVLTSTRGGCAAGRARPRAGSASEDPSQAGAPAQPTRASPAPRCTSGARPARHPRRRPAPSPSGTVSPSGTPSPPGA

Specific function: Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family. OpgC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787285, Length=408, Percent_Identity=26.4705882352941, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002656 [H]

Pfam domain/function: PF01757 Acyl_transf_3 [H]

EC number: 2.1.-.- [C]

Molecular weight: Translated: 51134; Mature: 51002

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQREAVPSAGASTAGVRYHHLDALRGVIMLIGVFVHVATLGDDPVFDGIARASGLFRME
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH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CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA