| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318675
Identifier: 158318675
GI number: 158318675
Start: 8460073
End: 8460678
Strand: Reverse
Name: 158318675
Synonym: Franean1_6943
Alternate gene names: NA
Gene position: 8460678-8460073 (Counterclockwise)
Preceding gene: 158318677
Following gene: 158318674
Centisome position: 94.2
GC content: 70.13
Gene sequence:
>606_bases ATGCTGGTGGTCATCCCGATCGAGGAGGACACGATGCCTGTCACCACCGGTACGAAGGCCACTGCCGCGGTCCGCTCGCC CCTGGCCGACCTCAACCGCCGCCATCACCCGGGACGCCACAGCCTCGCCGTCGACGTCCTGCTCGCGGTCACCCGGGTCG GCCTCGGCTGGATCTTCCTGTGGGCGTTCCTCGACAAGCTGTTCGGCCTGGGCCACGAGACCCCCTCAGCCCAGTCCTGG GTCAACGGCGGCAGCCCCACCGAGGGCTTCCTGGCCCACGCGGCCACCGGACCGTTCGCCGGGATCTACCACGACATCGC CGGCGCGGCCTGGGCTGACTGGCTGTTCATGATCGGCCTGGCCGGTATCGGCGCGGCTCTCGTCCTCGGTGTCGGGATGC GCGCCGCCGCCGTCGCGGGTGCCACCCTGCTCGTCCTCATGTGGACCGCGGTTCTTCCCCCGGAAAACAACCCCTTCATG GACGACCACCTCGTCTACGCCCTAGTCCTCGGCCTTCTCGCCGCCTTCGGCGCTGGTCGTTCCTTCGGCCTCGGCGGCTG GTGGGAGCGCACGGCTCTCACCCGTGGCCGGCCCTACCTGATCTGA
Upstream 100 bases:
>100_bases GGCGGGCTCCCGCCTGTGCCCGGCGGTCCCGTCCGGACTGGGACCATCCGCCCATAGGTGGCGGGATGTAGCTCACTCGG ACGGAAGTCCGGTCCCCGAC
Downstream 100 bases:
>100_bases AGTACTTCGTCCCGTGGCGAGATGGACCCGAGGTGGTCCCGAAAATGCGGCCGCCGGATGGGCCGAAAGCGGATCCATCC GGCATCGCCGGGCGGGCTGA
Product: DoxX family protein
Products: NA
Alternate protein names: Integral Membrane Protein; Integral Membrane C; DoxX Protein
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MLVVIPIEEDTMPVTTGTKATAAVRSPLADLNRRHHPGRHSLAVDVLLAVTRVGLGWIFLWAFLDKLFGLGHETPSAQSW VNGGSPTEGFLAHAATGPFAGIYHDIAGAAWADWLFMIGLAGIGAALVLGVGMRAAAVAGATLLVLMWTAVLPPENNPFM DDHLVYALVLGLLAAFGAGRSFGLGGWWERTALTRGRPYLI
Sequences:
>Translated_201_residues MLVVIPIEEDTMPVTTGTKATAAVRSPLADLNRRHHPGRHSLAVDVLLAVTRVGLGWIFLWAFLDKLFGLGHETPSAQSW VNGGSPTEGFLAHAATGPFAGIYHDIAGAAWADWLFMIGLAGIGAALVLGVGMRAAAVAGATLLVLMWTAVLPPENNPFM DDHLVYALVLGLLAAFGAGRSFGLGGWWERTALTRGRPYLI >Mature_201_residues MLVVIPIEEDTMPVTTGTKATAAVRSPLADLNRRHHPGRHSLAVDVLLAVTRVGLGWIFLWAFLDKLFGLGHETPSAQSW VNGGSPTEGFLAHAATGPFAGIYHDIAGAAWADWLFMIGLAGIGAALVLGVGMRAAAVAGATLLVLMWTAVLPPENNPFM DDHLVYALVLGLLAAFGAGRSFGLGGWWERTALTRGRPYLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21291; Mature: 21291
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVIPIEEDTMPVTTGTKATAAVRSPLADLNRRHHPGRHSLAVDVLLAVTRVGLGWIFL CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH WAFLDKLFGLGHETPSAQSWVNGGSPTEGFLAHAATGPFAGIYHDIAGAAWADWLFMIGL HHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AGIGAALVLGVGMRAAAVAGATLLVLMWTAVLPPENNPFMDDHLVYALVLGLLAAFGAGR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC SFGLGGWWERTALTRGRPYLI CCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MLVVIPIEEDTMPVTTGTKATAAVRSPLADLNRRHHPGRHSLAVDVLLAVTRVGLGWIFL CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH WAFLDKLFGLGHETPSAQSWVNGGSPTEGFLAHAATGPFAGIYHDIAGAAWADWLFMIGL HHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AGIGAALVLGVGMRAAAVAGATLLVLMWTAVLPPENNPFMDDHLVYALVLGLLAAFGAGR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC SFGLGGWWERTALTRGRPYLI CCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA