| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is nhaA2 [H]
Identifier: 158318660
GI number: 158318660
Start: 8439083
End: 8440423
Strand: Reverse
Name: nhaA2 [H]
Synonym: Franean1_6928
Alternate gene names: 158318660
Gene position: 8440423-8439083 (Counterclockwise)
Preceding gene: 158318664
Following gene: 158318659
Centisome position: 93.97
GC content: 72.48
Gene sequence:
>1341_bases ATGCCGAGCGTTCCCCCAGCCCCCACGCCCGGCCCTGCCTCGGGCTCCGGCTCGTCGGTGTCCCGGCCGCGGCTGCTGGC CCGGCCGACCTGGCCGCAGGCACGGTACGTCGCCGGGATCCTGCGCAGTGAGACGGTCGGCGGCCTGCTGTTGCTCGCGG GCGCCGTGGTGGCGCTGGTCTGGGCGAACTCACCGTGGCGGGACGCCTATGCCACCGTCGTCCACACCGGCGTGGGCCCC GCGTCCCTGCGCCTGCATCTGGACCTGGAGCACTGGGCCGCCGACGGGCTGCTTGCGATCTTCTTCTTCGTGGTGGGCCT CGAGCTCAAACGCGAGTTCGTCCTCGGCGATCTGAGATCACCGAGCCGCGCGGCGCTGCCCATCGTGGCCGCCCTCGGCG GGATGCTCGTGCCCGCGCTCATCTACACGCTGGTCAACGGCCTGGCCGTGGACGGCTCCCCCGAGGGCTGGGCGGTGCCG ACGGCCACCGACATCGCCTTCGCGGTCGCGGTGCTGGCGATCATCACGACGCATCTGCCGGCGGCGCTGCGGTCGTTCCT GCTGACGCTGGCGGTGGTCGACGACCTGCTCGCGATCGTGATCATCGCCGTGTTCTTCACCGACCGGCTCAGCCCCGCGC CGCTGGCGGGCTCCCTCGCGGTCATCGCGGTGTTCGCGTTGCTGGTGAACCGCGGCGTCACCCGCTGGTGGCTGCTCATC CCGCTCGCGCTCGTTGCCTGGGCCCTCATGCACGCCTCGGGGGTGCACGCGACCATCGCCGGGGTACTGCTGGGGTTCGC CGTGCCGGCCCGCCCTCGCTCCGGCGAGCACGCCGGGATGTCCGAGCGGTTCGAACACGCCTGGCGTCCTGTCTCGGCGG GCGTCGCGGTTCCGTTGTTCGCGTTGATGGCCGCCGGGGTCTCGCTCGCGGGCGGCGGCGTCAGCGCCGCGCTGGCCGAT CCGGCCGGCCTGGGTGTGGCGATGGGCCTGCTGCTGGGCAAGCCAATCGGGGTGATGGGTGCCACCGGCCTGCTCGCCCG GTTAACCCGGGCCGAACTGGACCCCGACCTGTCCTGGTGGGACGTCGCCGGCGTCGCCGTGCTCGCCGGAGTCGGGTTCA CTGTCTCCCTGCTCATCGGCGAGCTGGCCTTCGGCGCCGGCACAGCGGAGAACGATCACGTCAAGGCCGCCATCCTGATC GGCTCGCTGGCCTCGGCACTGCTCGCCTCGATCGTGCTGCGGGCGCGTAACCGGGTGTATCGCCGGATCGAGGAGCGGGA GACCGTCGACCTCGACGCCGACGGCATCCCCGACGTCTTCCAGGAACCGACCGTCGGCTGA
Upstream 100 bases:
>100_bases GCGTTGCGCCCTCACAGCCAGGGACGACCGGTTCAGGATGGTCACCCGTCGTGAGGTCGGGGCGGCGCCGCGCGACCGCG CCGACCGAGGAGACCAGCCG
Downstream 100 bases:
>100_bases GGTCGTCGAGATGGCCAACACCAAGGTGCGGCTGTTCCGTGCCGGCTGATCTCCGTGCCGGGTTCGACCACGAGGGCGTC CAGCACCCGTGGGGGAGATC
Product: Na+/H+ antiporter NhaA
Products: Na (I) [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: Sodium/proton antiporter nhaA 2 [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MPSVPPAPTPGPASGSGSSVSRPRLLARPTWPQARYVAGILRSETVGGLLLLAGAVVALVWANSPWRDAYATVVHTGVGP ASLRLHLDLEHWAADGLLAIFFFVVGLELKREFVLGDLRSPSRAALPIVAALGGMLVPALIYTLVNGLAVDGSPEGWAVP TATDIAFAVAVLAIITTHLPAALRSFLLTLAVVDDLLAIVIIAVFFTDRLSPAPLAGSLAVIAVFALLVNRGVTRWWLLI PLALVAWALMHASGVHATIAGVLLGFAVPARPRSGEHAGMSERFEHAWRPVSAGVAVPLFALMAAGVSLAGGGVSAALAD PAGLGVAMGLLLGKPIGVMGATGLLARLTRAELDPDLSWWDVAGVAVLAGVGFTVSLLIGELAFGAGTAENDHVKAAILI GSLASALLASIVLRARNRVYRRIEERETVDLDADGIPDVFQEPTVG
Sequences:
>Translated_446_residues MPSVPPAPTPGPASGSGSSVSRPRLLARPTWPQARYVAGILRSETVGGLLLLAGAVVALVWANSPWRDAYATVVHTGVGP ASLRLHLDLEHWAADGLLAIFFFVVGLELKREFVLGDLRSPSRAALPIVAALGGMLVPALIYTLVNGLAVDGSPEGWAVP TATDIAFAVAVLAIITTHLPAALRSFLLTLAVVDDLLAIVIIAVFFTDRLSPAPLAGSLAVIAVFALLVNRGVTRWWLLI PLALVAWALMHASGVHATIAGVLLGFAVPARPRSGEHAGMSERFEHAWRPVSAGVAVPLFALMAAGVSLAGGGVSAALAD PAGLGVAMGLLLGKPIGVMGATGLLARLTRAELDPDLSWWDVAGVAVLAGVGFTVSLLIGELAFGAGTAENDHVKAAILI GSLASALLASIVLRARNRVYRRIEERETVDLDADGIPDVFQEPTVG >Mature_445_residues PSVPPAPTPGPASGSGSSVSRPRLLARPTWPQARYVAGILRSETVGGLLLLAGAVVALVWANSPWRDAYATVVHTGVGPA SLRLHLDLEHWAADGLLAIFFFVVGLELKREFVLGDLRSPSRAALPIVAALGGMLVPALIYTLVNGLAVDGSPEGWAVPT ATDIAFAVAVLAIITTHLPAALRSFLLTLAVVDDLLAIVIIAVFFTDRLSPAPLAGSLAVIAVFALLVNRGVTRWWLLIP LALVAWALMHASGVHATIAGVLLGFAVPARPRSGEHAGMSERFEHAWRPVSAGVAVPLFALMAAGVSLAGGGVSAALADP AGLGVAMGLLLGKPIGVMGATGLLARLTRAELDPDLSWWDVAGVAVLAGVGFTVSLLIGELAFGAGTAENDHVKAAILIG SLASALLASIVLRARNRVYRRIEERETVDLDADGIPDVFQEPTVG
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG3004
COG function: function code P; Na+/H+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nhaA Na(+)/H(+) (TC 2.A.33) antiporter family [H]
Homologues:
Organism=Escherichia coli, GI1786201, Length=359, Percent_Identity=42.8969359331476, Blast_Score=226, Evalue=3e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023171 - InterPro: IPR004670 [H]
Pfam domain/function: PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 46091; Mature: 45960
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVPPAPTPGPASGSGSSVSRPRLLARPTWPQARYVAGILRSETVGGLLLLAGAVVALV CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WANSPWRDAYATVVHTGVGPASLRLHLDLEHWAADGLLAIFFFVVGLELKREFVLGDLRS HCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSRAALPIVAALGGMLVPALIYTLVNGLAVDGSPEGWAVPTATDIAFAVAVLAIITTHLP CCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AALRSFLLTLAVVDDLLAIVIIAVFFTDRLSPAPLAGSLAVIAVFALLVNRGVTRWWLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH PLALVAWALMHASGVHATIAGVLLGFAVPARPRSGEHAGMSERFEHAWRPVSAGVAVPLF HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHH ALMAAGVSLAGGGVSAALADPAGLGVAMGLLLGKPIGVMGATGLLARLTRAELDPDLSWW HHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHH DVAGVAVLAGVGFTVSLLIGELAFGAGTAENDHVKAAILIGSLASALLASIVLRARNRVY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RRIEERETVDLDADGIPDVFQEPTVG HHHHHHCCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure PSVPPAPTPGPASGSGSSVSRPRLLARPTWPQARYVAGILRSETVGGLLLLAGAVVALV CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WANSPWRDAYATVVHTGVGPASLRLHLDLEHWAADGLLAIFFFVVGLELKREFVLGDLRS HCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSRAALPIVAALGGMLVPALIYTLVNGLAVDGSPEGWAVPTATDIAFAVAVLAIITTHLP CCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AALRSFLLTLAVVDDLLAIVIIAVFFTDRLSPAPLAGSLAVIAVFALLVNRGVTRWWLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH PLALVAWALMHASGVHATIAGVLLGFAVPARPRSGEHAGMSERFEHAWRPVSAGVAVPLF HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHH ALMAAGVSLAGGGVSAALADPAGLGVAMGLLLGKPIGVMGATGLLARLTRAELDPDLSWW HHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHH DVAGVAVLAGVGFTVSLLIGELAFGAGTAENDHVKAAILIGSLASALLASIVLRARNRVY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RRIEERETVDLDADGIPDVFQEPTVG HHHHHHCCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: Na (I) [Cytoplasm] + 2 Proton [Periplasm] = Na (I) [Periplasm] + 2 Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA