| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318593
Identifier: 158318593
GI number: 158318593
Start: 8364568
End: 8365134
Strand: Direct
Name: 158318593
Synonym: Franean1_6861
Alternate gene names: NA
Gene position: 8364568-8365134 (Clockwise)
Preceding gene: 158318592
Following gene: 158318596
Centisome position: 93.13
GC content: 68.43
Gene sequence:
>567_bases ATGCCTTTACACGACGTCCTGGACAATCCGGTCTGGGCGGCGCCGACCGGACCACACGCCTCGTGTGCCGAGGTACACGG CCAGGCAGCGCGTTACCGGAGCGACATCACGGTCTTCGCCGCGCTGGCCGCCCAGACAGACCCCGCCGCCTGGCAGAACC TCGCGGAGCTCCTCGGGCCCGGACACGGACATCGCGGTGCTCGACGCAGACGATGTTCCCGAGGACGCCTGGTGACAACG GTGGTCGCGGGCATCCGGGCCCGCGGCGAGACGCCGTTCCTGCACACCACCGCCACTAACACCAGTGCGATCCGGCTCTA CGAGTCTCGGGTTCACCCGCCGAGCCCGCCCAGTTGGCCGCCTGGTTGGGTCGAACAGGGATACCGGCGCGAGCGCGCCA TGTCCGGACCACCCGGCACAGCCCCGCCAGACCGCCCCACCACACCGCGAAGATCAGAAACAGACCACACGCAGTACACG CCACCGAGATCCACAGCGGGCACTCAAGAGCGCACCGCGCTCGATGCTGGAATTCCGGAGCCTGGTTTCTGGTGTGGTGG GGGTTAG
Upstream 100 bases:
>100_bases GCACCTGAGCGCTGTCGGCGCGGAGTCGGCCCAGCTGTCGGCAAGCGGCAGGCGCTACGGTCCGGACGACCGCGCCGGTA TGGACTGAGGACGGGATCGA
Downstream 100 bases:
>100_bases AAGGGTGGCTGTGTGTCGTGGGGTATTTTCCACCCCGAGGCGGTGTGGCCCGACGGTTCATCACCACCCCCTCCCGTCGT ACCGGCCTTGTTCTGCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MPLHDVLDNPVWAAPTGPHASCAEVHGQAARYRSDITVFAALAAQTDPAAWQNLAELLGPGHGHRGARRRRCSRGRLVTT VVAGIRARGETPFLHTTATNTSAIRLYESRVHPPSPPSWPPGWVEQGYRRERAMSGPPGTAPPDRPTTPRRSETDHTQYT PPRSTAGTQERTALDAGIPEPGFWCGGG
Sequences:
>Translated_188_residues MPLHDVLDNPVWAAPTGPHASCAEVHGQAARYRSDITVFAALAAQTDPAAWQNLAELLGPGHGHRGARRRRCSRGRLVTT VVAGIRARGETPFLHTTATNTSAIRLYESRVHPPSPPSWPPGWVEQGYRRERAMSGPPGTAPPDRPTTPRRSETDHTQYT PPRSTAGTQERTALDAGIPEPGFWCGGG >Mature_187_residues PLHDVLDNPVWAAPTGPHASCAEVHGQAARYRSDITVFAALAAQTDPAAWQNLAELLGPGHGHRGARRRRCSRGRLVTTV VAGIRARGETPFLHTTATNTSAIRLYESRVHPPSPPSWPPGWVEQGYRRERAMSGPPGTAPPDRPTTPRRSETDHTQYTP PRSTAGTQERTALDAGIPEPGFWCGGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20292; Mature: 20161
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHDVLDNPVWAAPTGPHASCAEVHGQAARYRSDITVFAALAAQTDPAAWQNLAELLGP CCCHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC GHGHRGARRRRCSRGRLVTTVVAGIRARGETPFLHTTATNTSAIRLYESRVHPPSPPSWP CCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHCCCCCCCCCCC PGWVEQGYRRERAMSGPPGTAPPDRPTTPRRSETDHTQYTPPRSTAGTQERTALDAGIPE CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC PGFWCGGG CCCCCCCC >Mature Secondary Structure PLHDVLDNPVWAAPTGPHASCAEVHGQAARYRSDITVFAALAAQTDPAAWQNLAELLGP CCHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC GHGHRGARRRRCSRGRLVTTVVAGIRARGETPFLHTTATNTSAIRLYESRVHPPSPPSWP CCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHCCCCCCCCCCC PGWVEQGYRRERAMSGPPGTAPPDRPTTPRRSETDHTQYTPPRSTAGTQERTALDAGIPE CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC PGFWCGGG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA