Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318596

Identifier: 158318596

GI number: 158318596

Start: 8367903

End: 8369504

Strand: Direct

Name: 158318596

Synonym: Franean1_6864

Alternate gene names: NA

Gene position: 8367903-8369504 (Clockwise)

Preceding gene: 158318593

Following gene: 158318614

Centisome position: 93.16

GC content: 72.6

Gene sequence:

>1602_bases
GTGGACGTGCCCGGGTCTTCGGGCCCGCTCCCGTCCGCTGCCGGGACGGACGGGCCCGCCGGGAGCGGTGCGGGCGAGGA
CGTGATCGCGCGGACGCTGCCGTACGAGCGCCTCGGCACGCCGGGCTCGCCGATGCGGCCGGACAAGACTCTCCTCAGCT
CCGTGGCTCGGACCAGTGCCACCAGCCAGAGCAGCCCCGCCAACTCGGGCAGCTCAACCAGCACGGACAGCCCCACCCAT
TCGGACAGCCCTTTCCGCCAGCGGGCCTCTGCCGGCCTGGGCAGCCCCGTGAGCAAGGGCGGGGGCCCGGTTGGGAGCAC
CAGCGAGAACCCCGTCCCGGACGGGCCAGGGCCCGGAGCCAGGCCCGAAGCCGAAGCCGGAGCCGAAGCCGCGGACCCGG
ACGAAGCTGCCCAGGCGCCAGGGGCCGGAGGCCAGGGGAAGGACAGCCGCCGCGGCGGGAATCACCGCGGCGGGACGGCT
CGTCGAGGTAGGCCGCGCCGACGACGTCGCACCGTGCTCGGGGTCGCCGCCGCCGCGATGGTCATCCTGCTCGGCGCGAT
CGGCCTGGTGACGCTCACCGGCGGCCCGGATTCGCGGCGTTCGGCCGATGCCCCGGCGGCGAGTCAGGCCCCGGATACGG
CGAAGGCGCCCGGGGCGCAGCCCGCGCAGCCGGAGCCGGCACCGACCGGGCCGGCCGCGCCGGGGGTGCGGTGGCCCTCC
GGGGCGAACGGGAACCCGCCACTGGACATCCGCGCCTGGGAGGCGTGGACGGGGCGGCTGACGAACGTCGCGGTCGTCTT
CACGAAACGTAATGACTGGAACCAGATCGCCTACGACAACTGGCCGATGTCGGACTACCCGCCGGGGGTGTACAACGGGC
AGCTTTCCATCGCCCAGCCGCTGTTCCCGCGGTCGGGTGACGAGCGGACCTGCGCCCGGGGTCACTATGACGCCTACTGG
GCGGCGTTCGGCCAGACCCTGACGCGTAACGGCCGGCCCGACGCCATCGTCCGGCTCGGCTGGGAGTTCAACGGGAACTG
GTTCTGGTGGTATCCGCGGGACACCGCGACCTGGAAGACCTGTTTCCAGCGGGCGGTCACCCAGATCCGGTCGACGGCGC
CGGCGGTGCGGATCGACTTCAACGTCAGCGCGCACCGTGACCGGATGCCGAACGGTGACGACGTGTGGGCGGCCTACCCG
GGCGACGAGTTCGTGAGCATCGTCAGCAGTGACGCCTACGACTCCTACCCGCCGTCGCGCTCCGCGGAGACCTTCGACCA
GCAGTGCAACATTCCGTCGGGGGCGTGCACCGTGGCCGCGTTCGCGCGGGCGCACGGCAAGCAGTTCGCGGTGCCGGAGT
GGGGGCTCGTCCGGGTGGACGGGAACGGCGGCGGCGACAATCCGCTCTTCATCGAGAAGATGCACGACCTGTTCGACCGG
AACCGGGACATCCTCGCCTACGAGGCGTATTTCAGCACCGCCGAGGCGGACAACGTGCGTTCCTCGCTGATCAACCCGCC
GCTGAACCCGATGGCCGCGCAGCGGTACCTGGAGCTGTTCGGTGCCGGGGCCGGCGGCAGTGGCAGCCCCGGCGGCCTGT
GA

Upstream 100 bases:

>100_bases
GGACACCGCCACCGAGGTCCCCGGCAACGCGTCCGGAGCGGGCACCGACCCGGTGCCGAAGACCGGCGAAGGTCCCGGCG
GCGCTGGTGGAGGTGTAGGC

Downstream 100 bases:

>100_bases
CCCGGGTGGTGACCGGTCCGGCCGTGATCTGAACGGCGGCCCGGTCCGGCCGTGACCCGGGCCGTGACCCGGGCCGGCTC
GAGGAGCGTGGTGGCTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosidase; Beta-Mannanase; FHA Domain-Containing Protein

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MDVPGSSGPLPSAAGTDGPAGSGAGEDVIARTLPYERLGTPGSPMRPDKTLLSSVARTSATSQSSPANSGSSTSTDSPTH
SDSPFRQRASAGLGSPVSKGGGPVGSTSENPVPDGPGPGARPEAEAGAEAADPDEAAQAPGAGGQGKDSRRGGNHRGGTA
RRGRPRRRRRTVLGVAAAAMVILLGAIGLVTLTGGPDSRRSADAPAASQAPDTAKAPGAQPAQPEPAPTGPAAPGVRWPS
GANGNPPLDIRAWEAWTGRLTNVAVVFTKRNDWNQIAYDNWPMSDYPPGVYNGQLSIAQPLFPRSGDERTCARGHYDAYW
AAFGQTLTRNGRPDAIVRLGWEFNGNWFWWYPRDTATWKTCFQRAVTQIRSTAPAVRIDFNVSAHRDRMPNGDDVWAAYP
GDEFVSIVSSDAYDSYPPSRSAETFDQQCNIPSGACTVAAFARAHGKQFAVPEWGLVRVDGNGGGDNPLFIEKMHDLFDR
NRDILAYEAYFSTAEADNVRSSLINPPLNPMAAQRYLELFGAGAGGSGSPGGL

Sequences:

>Translated_533_residues
MDVPGSSGPLPSAAGTDGPAGSGAGEDVIARTLPYERLGTPGSPMRPDKTLLSSVARTSATSQSSPANSGSSTSTDSPTH
SDSPFRQRASAGLGSPVSKGGGPVGSTSENPVPDGPGPGARPEAEAGAEAADPDEAAQAPGAGGQGKDSRRGGNHRGGTA
RRGRPRRRRRTVLGVAAAAMVILLGAIGLVTLTGGPDSRRSADAPAASQAPDTAKAPGAQPAQPEPAPTGPAAPGVRWPS
GANGNPPLDIRAWEAWTGRLTNVAVVFTKRNDWNQIAYDNWPMSDYPPGVYNGQLSIAQPLFPRSGDERTCARGHYDAYW
AAFGQTLTRNGRPDAIVRLGWEFNGNWFWWYPRDTATWKTCFQRAVTQIRSTAPAVRIDFNVSAHRDRMPNGDDVWAAYP
GDEFVSIVSSDAYDSYPPSRSAETFDQQCNIPSGACTVAAFARAHGKQFAVPEWGLVRVDGNGGGDNPLFIEKMHDLFDR
NRDILAYEAYFSTAEADNVRSSLINPPLNPMAAQRYLELFGAGAGGSGSPGGL
>Mature_533_residues
MDVPGSSGPLPSAAGTDGPAGSGAGEDVIARTLPYERLGTPGSPMRPDKTLLSSVARTSATSQSSPANSGSSTSTDSPTH
SDSPFRQRASAGLGSPVSKGGGPVGSTSENPVPDGPGPGARPEAEAGAEAADPDEAAQAPGAGGQGKDSRRGGNHRGGTA
RRGRPRRRRRTVLGVAAAAMVILLGAIGLVTLTGGPDSRRSADAPAASQAPDTAKAPGAQPAQPEPAPTGPAAPGVRWPS
GANGNPPLDIRAWEAWTGRLTNVAVVFTKRNDWNQIAYDNWPMSDYPPGVYNGQLSIAQPLFPRSGDERTCARGHYDAYW
AAFGQTLTRNGRPDAIVRLGWEFNGNWFWWYPRDTATWKTCFQRAVTQIRSTAPAVRIDFNVSAHRDRMPNGDDVWAAYP
GDEFVSIVSSDAYDSYPPSRSAETFDQQCNIPSGACTVAAFARAHGKQFAVPEWGLVRVDGNGGGDNPLFIEKMHDLFDR
NRDILAYEAYFSTAEADNVRSSLINPPLNPMAAQRYLELFGAGAGGSGSPGGL

Specific function: Unknown

COG id: COG4124

COG function: function code G; Beta-mannanase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55922; Mature: 55922

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure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CCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA