| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318592
Identifier: 158318592
GI number: 158318592
Start: 8363098
End: 8364555
Strand: Direct
Name: 158318592
Synonym: Franean1_6860
Alternate gene names: NA
Gene position: 8363098-8364555 (Clockwise)
Preceding gene: 158318590
Following gene: 158318593
Centisome position: 93.11
GC content: 70.3
Gene sequence:
>1458_bases ATGGGCAGGACGAACGCGTCGGAGATCCAGGAGAGCTGGGCGGTCGACGCGCCGAGCGCCTGCTGTATGGCCGGCAGGCT GACCGAGACCGTGGTGACCGGCAGGTATGCGACGAAGACGCCGAGACAGGCCATGGCCAGGGTGACCGGCCGCCGGACGG CGGTGTGCGCCGTTGCGTTCACATGTTCTCCTTGCAGCGCTTCACGCCGCGCGCTCAGGTCTGCTGACGGTGGTGGGGCG GGCCCGGAGGTGCTGTTGCCCTTGCTGCCGCCCTGCCAGCATCACGACCGGATCAAGGAATCTCCAAAGCGGACGCCGAA AATGTGCAGGAGCCCCCGGTTGCCCGCCCATGGCATGCAAACTTCCCTCATGACAGACCACCTGGACGCACAGATCCTCC ACGCGCTCCAGATCGCGCCACGCGCGTCATTCCGACGCATCGGAGAGGCCACCGACGTCTCGGAGCAGACGGCCGCCCGC CGCTACCACGCCCTGCGTCGCAGCGGAGTCGTGCGCGTGGTCGGTCTGGTCAACCCCCGGGTCCACGGGCACGCCCAGTG GGTCGCCCGCATCCACTGCCGACCTGACCGCGTCAGTCAGCTCGCCAGCGCCCTGGTCCGCCAGCCGGAGATCACCTACG TCAGCATCGCGTCCGGCGGCACGGAGATCATCTGCATGATCCACGCACCCGTCGGCGACCAGCACGAGGGCCTGCTGCTG CGGCAGCTGCCCCGGTCCGCGGCCGTCCTCGCCATCACCGTCGACCTGCTGATCCACGCGTCCGGCGAGCCCGGCGCGCC GGACTGGACGGGGTACGGCGCCTACCTCACCCCGGAGCAGGTCCGTTGCCTTCTCCGCGACGAGCCGCCCCGCAGACCGC CCGGCCCGCTCCTGACTCCGTCCGAGCAGGATCTCCCCCTGCTGCGGGCGCTCGGCGAGGACGGCCGCGTCACTCACACC CACCTCGCCGCGGCGACCGGATGGTCCATGTCCCGGGTGGCCCGCCGGCTGGAGGCGCTGGAGTCCGCGGGAACTCTCCT CTACGGAGTAGACCTCCTGCCGGAACGGCTTGGGTACAAGATCAACGCCACGCTCTGGCTGCGCGTCTCGCCGGCTCACA TCCGGAGCGTGAGCGAGGATCTCGCCCGTCATGACGAGATCGCCTTCGTGGGCGCCACAAGCGGGCGCGACAACCTGATG GCCATCGCGATCTGTCGCGGCGTCGAGGATCTCTACGACTACCTGACCTCCCGCCTGGCGCGGATCCCGGGCATCCACAC CTACGCGGTCAGCATCAGAGTCCAGCGACTGAAGCAGGCCGCGTCGGTCATCGCGCACGGTCGACTCGTCCCCGCCGCCG GCGTCCGGGGGCACCTGAGCGCTGTCGGCGCGGAGTCGGCCCAGCTGTCGGCAAGCGGCAGGCGCTACGGTCCGGACGAC CGCGCCGGTATGGACTGA
Upstream 100 bases:
>100_bases GATCGCCGCGCCGGCGGCGCAGCAGGCCAGCCCCGCCAGGTAGACCTTCTTCCGGCCATGGACGTCACCGAACACGCCGG TGCTGAGGATGAGCGCGGCC
Downstream 100 bases:
>100_bases GGACGGGATCGAATGCCTTTACACGACGTCCTGGACAATCCGGTCTGGGCGGCGCCGACCGGACCACACGCCTCGTGTGC CGAGGTACACGGCCAGGCAG
Product: AsnC family transcriptional regulator
Products: NA
Alternate protein names: AsnC Family Transcriptional Regulator; Transcriptional Regulatory Protein; AsnC-Family Transcriptional Regulator; Lrp/AsnC Family Transcriptional Regulator; Transcriptional Regulator; Transcription Regulator AsnC; AsnC-Family Protein Transcriptional Regulator
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MGRTNASEIQESWAVDAPSACCMAGRLTETVVTGRYATKTPRQAMARVTGRRTAVCAVAFTCSPCSASRRALRSADGGGA GPEVLLPLLPPCQHHDRIKESPKRTPKMCRSPRLPAHGMQTSLMTDHLDAQILHALQIAPRASFRRIGEATDVSEQTAAR RYHALRRSGVVRVVGLVNPRVHGHAQWVARIHCRPDRVSQLASALVRQPEITYVSIASGGTEIICMIHAPVGDQHEGLLL RQLPRSAAVLAITVDLLIHASGEPGAPDWTGYGAYLTPEQVRCLLRDEPPRRPPGPLLTPSEQDLPLLRALGEDGRVTHT HLAAATGWSMSRVARRLEALESAGTLLYGVDLLPERLGYKINATLWLRVSPAHIRSVSEDLARHDEIAFVGATSGRDNLM AIAICRGVEDLYDYLTSRLARIPGIHTYAVSIRVQRLKQAASVIAHGRLVPAAGVRGHLSAVGAESAQLSASGRRYGPDD RAGMD
Sequences:
>Translated_485_residues MGRTNASEIQESWAVDAPSACCMAGRLTETVVTGRYATKTPRQAMARVTGRRTAVCAVAFTCSPCSASRRALRSADGGGA GPEVLLPLLPPCQHHDRIKESPKRTPKMCRSPRLPAHGMQTSLMTDHLDAQILHALQIAPRASFRRIGEATDVSEQTAAR RYHALRRSGVVRVVGLVNPRVHGHAQWVARIHCRPDRVSQLASALVRQPEITYVSIASGGTEIICMIHAPVGDQHEGLLL RQLPRSAAVLAITVDLLIHASGEPGAPDWTGYGAYLTPEQVRCLLRDEPPRRPPGPLLTPSEQDLPLLRALGEDGRVTHT HLAAATGWSMSRVARRLEALESAGTLLYGVDLLPERLGYKINATLWLRVSPAHIRSVSEDLARHDEIAFVGATSGRDNLM AIAICRGVEDLYDYLTSRLARIPGIHTYAVSIRVQRLKQAASVIAHGRLVPAAGVRGHLSAVGAESAQLSASGRRYGPDD RAGMD >Mature_484_residues GRTNASEIQESWAVDAPSACCMAGRLTETVVTGRYATKTPRQAMARVTGRRTAVCAVAFTCSPCSASRRALRSADGGGAG PEVLLPLLPPCQHHDRIKESPKRTPKMCRSPRLPAHGMQTSLMTDHLDAQILHALQIAPRASFRRIGEATDVSEQTAARR YHALRRSGVVRVVGLVNPRVHGHAQWVARIHCRPDRVSQLASALVRQPEITYVSIASGGTEIICMIHAPVGDQHEGLLLR QLPRSAAVLAITVDLLIHASGEPGAPDWTGYGAYLTPEQVRCLLRDEPPRRPPGPLLTPSEQDLPLLRALGEDGRVTHTH LAAATGWSMSRVARRLEALESAGTLLYGVDLLPERLGYKINATLWLRVSPAHIRSVSEDLARHDEIAFVGATSGRDNLMA IAICRGVEDLYDYLTSRLARIPGIHTYAVSIRVQRLKQAASVIAHGRLVPAAGVRGHLSAVGAESAQLSASGRRYGPDDR AGMD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52441; Mature: 52310
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50956 HTH_ASNC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTNASEIQESWAVDAPSACCMAGRLTETVVTGRYATKTPRQAMARVTGRRTAVCAVAF CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEE TCSPCSASRRALRSADGGGAGPEVLLPLLPPCQHHDRIKESPKRTPKMCRSPRLPAHGMQ ECCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCH TSLMTDHLDAQILHALQIAPRASFRRIGEATDVSEQTAARRYHALRRSGVVRVVGLVNPR HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC VHGHAQWVARIHCRPDRVSQLASALVRQPEITYVSIASGGTEIICMIHAPVGDQHEGLLL CCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHH RQLPRSAAVLAITVDLLIHASGEPGAPDWTGYGAYLTPEQVRCLLRDEPPRRPPGPLLTP HHCCCCCEEHEEEEEEEEECCCCCCCCCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCCC SEQDLPLLRALGEDGRVTHTHLAAATGWSMSRVARRLEALESAGTLLYGVDLLPERLGYK CCCCCHHHHHCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHCEE INATLWLRVSPAHIRSVSEDLARHDEIAFVGATSGRDNLMAIAICRGVEDLYDYLTSRLA EEEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHHCHHHHHHHHHHHHH RIPGIHTYAVSIRVQRLKQAASVIAHGRLVPAAGVRGHLSAVGAESAQLSASGRRYGPDD HCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCC RAGMD CCCCC >Mature Secondary Structure GRTNASEIQESWAVDAPSACCMAGRLTETVVTGRYATKTPRQAMARVTGRRTAVCAVAF CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEE TCSPCSASRRALRSADGGGAGPEVLLPLLPPCQHHDRIKESPKRTPKMCRSPRLPAHGMQ ECCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCH TSLMTDHLDAQILHALQIAPRASFRRIGEATDVSEQTAARRYHALRRSGVVRVVGLVNPR HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC VHGHAQWVARIHCRPDRVSQLASALVRQPEITYVSIASGGTEIICMIHAPVGDQHEGLLL CCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHH RQLPRSAAVLAITVDLLIHASGEPGAPDWTGYGAYLTPEQVRCLLRDEPPRRPPGPLLTP HHCCCCCEEHEEEEEEEEECCCCCCCCCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCCC SEQDLPLLRALGEDGRVTHTHLAAATGWSMSRVARRLEALESAGTLLYGVDLLPERLGYK CCCCCHHHHHCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHCEE INATLWLRVSPAHIRSVSEDLARHDEIAFVGATSGRDNLMAIAICRGVEDLYDYLTSRLA EEEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHHCHHHHHHHHHHHHH RIPGIHTYAVSIRVQRLKQAASVIAHGRLVPAAGVRGHLSAVGAESAQLSASGRRYGPDD HCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCC RAGMD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA