| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318545
Identifier: 158318545
GI number: 158318545
Start: 8302349
End: 8303353
Strand: Direct
Name: 158318545
Synonym: Franean1_6813
Alternate gene names: NA
Gene position: 8302349-8303353 (Clockwise)
Preceding gene: 158318544
Following gene: 158318546
Centisome position: 92.43
GC content: 75.42
Gene sequence:
>1005_bases GTGAGCGGCGTGAGCGGCGTGAGCGAGGGTGCCGCGCCGGCACGCCCGCTCCCGGGGACGGGCGGCTCCGGTGCGGCGCG TCGGGTCAGGTCGCTGGGCCGCGCCGAGGTGACCCGCAGCGTCGAGATGGCCCAGGTGACGACGATGCCGGTGCTGGTCG TGCCGCTCGTCCTGTCCGGGCTGCTCGTCCCGCTCGACGCGCTGGCCGCGCCGTGGGAGCTGGCCGCCCAGATGCTGCCA CTGACCCCGGTGGTCGATCTGATGCGGCATGACACCGTGGGCTCCATGACCGGGTGGTGGCGCTGGTGGCGCGAGCGCGG CAGCGCCGAGCGCATGGACGCCATCACCCGGTGGCCGCTGTACCTGTTCTCCGCCACCGAGCCGGGGCTGGTGCTGCTGG CGATCAGCTCCCGGCCGGGTGCCTGGGGGCTGGCCGCCGGTGGGCTCCTCGTCGTGTCCGCGCTACACGCCGTGGCCTGT GTGGTGCTGCTGCGCGCCGGGCTCGCGGCCCATCTGGGCGGGCGGCGGGCGGCGGCCCCGCTGGTCGCCGGGGTGGCCGC GGGCGCGGTCGTCCTGGCCGCGATGGGCACCGCCATCCCCGGGTTCGACGCCGATCCCGGCGGCGGTGGCATGCCGGTCA CGCTCATCGTGACGATGATCGCCGGTGGCGCGTCGACCGCGGCGGTCGCGCCACTGCTGCGGACACCGTCGCTGCTCGCC TGCGTGGTGGTGGGGGCCGCCGGCTGCGCCCTGATCCAGGCCATGGTGGACGCCGTGGCGCCGGCGGCCGACGTGGGCCT CGAAGTCACACCGCTCCAGGCGGCCGGGTACTACGCGTACCCGATTGTGCTGGTGGCGCTGACCTACCGGGTCTCGACCT GGATGCTCGGCGTGGTGTGGGAGATAGACCGGTCCCGGCGGTCCACACCAGCCTCGCCGTGGCCGAGGAGCGGCTGCGGT TCGCCCGGGACCTGCACGACGTGCTGGGCCGGAACCTGTCGCTGA
Upstream 100 bases:
>100_bases CCGTGGCCCGTTCCGAGTTCGCTGTGGACGGTTCCGGCGGTTCGCTCCCCGGCGAGGTCGACCAGCCCGGCCGACAGGCC CGACCGGATGCGGCGGCGGC
Downstream 100 bases:
>100_bases TGGCCGTCCAGAGCGAGCTCGCCGCACGCCTGGTCGAGCACGGAGACGCTGCCGCGGCGGAACGCATGCTGGAGGTTCGC CAGGTCGCCCACGACTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSGVSGVSEGAAPARPLPGTGGSGAARRVRSLGRAEVTRSVEMAQVTTMPVLVVPLVLSGLLVPLDALAAPWELAAQMLP LTPVVDLMRHDTVGSMTGWWRWWRERGSAERMDAITRWPLYLFSATEPGLVLLAISSRPGAWGLAAGGLLVVSALHAVAC VVLLRAGLAAHLGGRRAAAPLVAGVAAGAVVLAAMGTAIPGFDADPGGGGMPVTLIVTMIAGGASTAAVAPLLRTPSLLA CVVVGAAGCALIQAMVDAVAPAADVGLEVTPLQAAGYYAYPIVLVALTYRVSTWMLGVVWEIDRSRRSTPASPWPRSGCG SPGTCTTCWAGTCR
Sequences:
>Translated_334_residues MSGVSGVSEGAAPARPLPGTGGSGAARRVRSLGRAEVTRSVEMAQVTTMPVLVVPLVLSGLLVPLDALAAPWELAAQMLP LTPVVDLMRHDTVGSMTGWWRWWRERGSAERMDAITRWPLYLFSATEPGLVLLAISSRPGAWGLAAGGLLVVSALHAVAC VVLLRAGLAAHLGGRRAAAPLVAGVAAGAVVLAAMGTAIPGFDADPGGGGMPVTLIVTMIAGGASTAAVAPLLRTPSLLA CVVVGAAGCALIQAMVDAVAPAADVGLEVTPLQAAGYYAYPIVLVALTYRVSTWMLGVVWEIDRSRRSTPASPWPRSGCG SPGTCTTCWAGTCR >Mature_333_residues SGVSGVSEGAAPARPLPGTGGSGAARRVRSLGRAEVTRSVEMAQVTTMPVLVVPLVLSGLLVPLDALAAPWELAAQMLPL TPVVDLMRHDTVGSMTGWWRWWRERGSAERMDAITRWPLYLFSATEPGLVLLAISSRPGAWGLAAGGLLVVSALHAVACV VLLRAGLAAHLGGRRAAAPLVAGVAAGAVVLAAMGTAIPGFDADPGGGGMPVTLIVTMIAGGASTAAVAPLLRTPSLLAC VVVGAAGCALIQAMVDAVAPAADVGLEVTPLQAAGYYAYPIVLVALTYRVSTWMLGVVWEIDRSRRSTPASPWPRSGCGS PGTCTTCWAGTCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34058; Mature: 33927
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVSGVSEGAAPARPLPGTGGSGAARRVRSLGRAEVTRSVEMAQVTTMPVLVVPLVLSG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVPLDALAAPWELAAQMLPLTPVVDLMRHDTVGSMTGWWRWWRERGSAERMDAITRWPL HHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCE YLFSATEPGLVLLAISSRPGAWGLAAGGLLVVSALHAVACVVLLRAGLAAHLGGRRAAAP EEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LVAGVAAGAVVLAAMGTAIPGFDADPGGGGMPVTLIVTMIAGGASTAAVAPLLRTPSLLA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHH CVVVGAAGCALIQAMVDAVAPAADVGLEVTPLQAAGYYAYPIVLVALTYRVSTWMLGVVW HHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHE EIDRSRRSTPASPWPRSGCGSPGTCTTCWAGTCR EEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGVSGVSEGAAPARPLPGTGGSGAARRVRSLGRAEVTRSVEMAQVTTMPVLVVPLVLSG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVPLDALAAPWELAAQMLPLTPVVDLMRHDTVGSMTGWWRWWRERGSAERMDAITRWPL HHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCE YLFSATEPGLVLLAISSRPGAWGLAAGGLLVVSALHAVACVVLLRAGLAAHLGGRRAAAP EEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LVAGVAAGAVVLAAMGTAIPGFDADPGGGGMPVTLIVTMIAGGASTAAVAPLLRTPSLLA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHH CVVVGAAGCALIQAMVDAVAPAADVGLEVTPLQAAGYYAYPIVLVALTYRVSTWMLGVVW HHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHE EIDRSRRSTPASPWPRSGCGSPGTCTTCWAGTCR EEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA