| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318544
Identifier: 158318544
GI number: 158318544
Start: 8301999
End: 8302352
Strand: Direct
Name: 158318544
Synonym: Franean1_6812
Alternate gene names: NA
Gene position: 8301999-8302352 (Clockwise)
Preceding gene: 158318543
Following gene: 158318545
Centisome position: 92.43
GC content: 72.03
Gene sequence:
>354_bases ATGCTCGAGGTCATGGGCAAGGACAAGGGCAAGGGCAAGGGCAGTGGCGGGAGCGGCGACGGAGGCGGCAGTGACAGCGA CGGGAGTGGGAGCGGAGGCGGAGGTGGCGGCGGCTGCGGAAGCGGGGTCCTGCTGACCACCGCGGATCTCCAGCGGACCC TCACGATGCTGCTGGCCTGGGGCGACCGGAACGGGGTGCGGTTGCGCAACCTCAATGCCCGGTCGGCGTCGCTCGAGGAG GTGTTTCTCGCCGTGGCCCGTTCCGAGTTCGCTGTGGACGGTTCCGGCGGTTCGCTCCCCGGCGAGGTCGACCAGCCCGG CCGACAGGCCCGACCGGATGCGGCGGCGGCGTGA
Upstream 100 bases:
>100_bases TGCCTGAGCATCGGCGACGCTGACATTTGTCATGGGCGAGCCGTGCGCGCCGCACGGAAACCGATGACACCGTCACCATC GGTGACACGGATGGTGACGG
Downstream 100 bases:
>100_bases GCGGCGTGAGCGGCGTGAGCGAGGGTGCCGCGCCGGCACGCCCGCTCCCGGGGACGGGCGGCTCCGGTGCGGCGCGTCGG GTCAGGTCGCTGGGCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MLEVMGKDKGKGKGSGGSGDGGGSDSDGSGSGGGGGGGCGSGVLLTTADLQRTLTMLLAWGDRNGVRLRNLNARSASLEE VFLAVARSEFAVDGSGGSLPGEVDQPGRQARPDAAAA
Sequences:
>Translated_117_residues MLEVMGKDKGKGKGSGGSGDGGGSDSDGSGSGGGGGGGCGSGVLLTTADLQRTLTMLLAWGDRNGVRLRNLNARSASLEE VFLAVARSEFAVDGSGGSLPGEVDQPGRQARPDAAAA >Mature_117_residues MLEVMGKDKGKGKGSGGSGDGGGSDSDGSGSGGGGGGGCGSGVLLTTADLQRTLTMLLAWGDRNGVRLRNLNARSASLEE VFLAVARSEFAVDGSGGSLPGEVDQPGRQARPDAAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11409; Mature: 11409
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEVMGKDKGKGKGSGGSGDGGGSDSDGSGSGGGGGGGCGSGVLLTTADLQRTLTMLLAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHC GDRNGVRLRNLNARSASLEEVFLAVARSEFAVDGSGGSLPGEVDQPGRQARPDAAAA CCCCCEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLEVMGKDKGKGKGSGGSGDGGGSDSDGSGSGGGGGGGCGSGVLLTTADLQRTLTMLLAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHC GDRNGVRLRNLNARSASLEEVFLAVARSEFAVDGSGGSLPGEVDQPGRQARPDAAAA CCCCCEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA