Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is uhpA [C]

Identifier: 158318546

GI number: 158318546

Start: 8303353

End: 8303832

Strand: Direct

Name: uhpA [C]

Synonym: Franean1_6814

Alternate gene names: 158318546

Gene position: 8303353-8303832 (Clockwise)

Preceding gene: 158318545

Following gene: 158318547

Centisome position: 92.44

GC content: 74.58

Gene sequence:

>480_bases
ATGGCCGTCCAGAGCGAGCTCGCCGCACGCCTGGTCGAGCACGGAGACGCTGCCGCGGCGGAACGCATGCTGGAGGTTCG
CCAGGTCGCCCACGACTCGCTGCGCGAGATGCGCGCGGTTGTCGACGGCTACCGCCGGGCCGACCTGGGCGCGGAGCTCG
CCGGCGCCCGGGCGATGCGCGCCGAGGTCCCCGGATGCGCCAACGTGATCGTGACCAGCCACGGACGTCCCGGTTATCTC
AAGCAGGCGCTCGCGGCGGGGGCGTGCGGCTTCCTTCCGAAGACCGTCTCCGCGCAGGTCCTCGCCGACGTGGTCCGGGC
GGTGCACGGCGGCGGCCGCTACGTGGACCCGGAGCTGGCCGCGGAGGCGATCGCGGCCGGAGAGAGCCCGTTGACCTCGC
GTGAGGCCGAGGTCCTCGAGCTGGGCGCCGTCAACCGGCACGAGGCCGTCCAGCTCGCCCGCGCCCGCGGCTGGATCTGA

Upstream 100 bases:

>100_bases
TAGACCGGTCCCGGCGGTCCACACCAGCCTCGCCGTGGCCGAGGAGCGGCTGCGGTTCGCCCGGGACCTGCACGACGTGC
TGGGCCGGAACCTGTCGCTG

Downstream 100 bases:

>100_bases
CCCGAGGCACCGCCGGCCGGCCGGGGATGAGCATCGAGGGAGTGGGTGGCCTGCCGCCTACGGGGCCGCAACGGGGCCCG
CTCGGCCAGCGGCTATTTCG

Product: response regulator receiver protein

Products: NA

Alternate protein names: Two Component Transcriptional Regulator LuxR Family; LuxR Family Two Component Transcriptional Regulator; Response Regulator Receiver Protein; Two Component LuxR Family Transcriptional Regulator; Two-Component Response Regulator; Two Component Transcriptional Regulator; NarL Family Two-Component Response Regulator; LuxR Response Regulator Receiver; LuxR Family Two Component System Response Regulator; Regulator; Response Regulator; LuxR Family Two-Component Response Regulator; Regulatory Protein; Response Regulator Receiver; Signal Transduction Histidine Kinase

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAVQSELAARLVEHGDAAAAERMLEVRQVAHDSLREMRAVVDGYRRADLGAELAGARAMRAEVPGCANVIVTSHGRPGYL
KQALAAGACGFLPKTVSAQVLADVVRAVHGGGRYVDPELAAEAIAAGESPLTSREAEVLELGAVNRHEAVQLARARGWI

Sequences:

>Translated_159_residues
MAVQSELAARLVEHGDAAAAERMLEVRQVAHDSLREMRAVVDGYRRADLGAELAGARAMRAEVPGCANVIVTSHGRPGYL
KQALAAGACGFLPKTVSAQVLADVVRAVHGGGRYVDPELAAEAIAAGESPLTSREAEVLELGAVNRHEAVQLARARGWI
>Mature_158_residues
AVQSELAARLVEHGDAAAAERMLEVRQVAHDSLREMRAVVDGYRRADLGAELAGARAMRAEVPGCANVIVTSHGRPGYLK
QALAAGACGFLPKTVSAQVLADVVRAVHGGGRYVDPELAAEAIAAGESPLTSREAEVLELGAVNRHEAVQLARARGWI

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16714; Mature: 16583

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQSELAARLVEHGDAAAAERMLEVRQVAHDSLREMRAVVDGYRRADLGAELAGARAMR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVPGCANVIVTSHGRPGYLKQALAAGACGFLPKTVSAQVLADVVRAVHGGGRYVDPELA
HCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
AEAIAAGESPLTSREAEVLELGAVNRHEAVQLARARGWI
HHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVQSELAARLVEHGDAAAAERMLEVRQVAHDSLREMRAVVDGYRRADLGAELAGARAMR
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVPGCANVIVTSHGRPGYLKQALAAGACGFLPKTVSAQVLADVVRAVHGGGRYVDPELA
HCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
AEAIAAGESPLTSREAEVLELGAVNRHEAVQLARARGWI
HHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA