Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318477

Identifier: 158318477

GI number: 158318477

Start: 8203926

End: 8204375

Strand: Direct

Name: 158318477

Synonym: Franean1_6745

Alternate gene names: NA

Gene position: 8203926-8204375 (Clockwise)

Preceding gene: 158318470

Following gene: 158318478

Centisome position: 91.34

GC content: 70.0

Gene sequence:

>450_bases
ATGAGCATGCCCCCGATCCGCCCACCGTTCGACTTTCCCGCCTTCCTGAAAGAAAGGGGATTCAGTCGTCTCCGGGAGCG
TCCCGATGTCTATCTCAACGACCGCGTTGAGATCGAGCACGACGGCGGCCAGCTACACCTGCGCTGCTACACCACATCCG
CCCGCCGGCTGATCGACTGGTCCTGCACCTACGGCCCCGGCACACCCACAGAACTGATCGTCTCCGGTGTCCTCGCGGCG
CTCACCCCGGTCCCCGTCGCGCGGGCCGACGCCGGGGAATACACGGTCTGGGCCGCTGTGCCTATCCCCTTCGCGGTCGA
GCTGTCCCACGACACCGCCCATGCCGCCACCCAGCGGCTGCGCGCCTGGGGATGGCCCTACGCCACGATCGGCCCGGCCC
GATCCGCCCCGCCGACCGGCGCCCCGGCCCCGCAGTCGGACACACCGTGA

Upstream 100 bases:

>100_bases
CACCGCCACACCTGGCGCGTATACGGGCCGGGCGCACCCCCCATTCCCGTGTCGCAGGCGTCCACGCGCCTGCCGCCATC
CCGTGTCGAAAAGGTCCCCG

Downstream 100 bases:

>100_bases
TCATCGTTGTGGTGATTCCGGCGGCCCCGACGGCCCCGATACGTCGACGCCGTCTCGATCCCACTGACATTCCCGCGATG
GAAAGGATCGTCGGCGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSMPPIRPPFDFPAFLKERGFSRLRERPDVYLNDRVEIEHDGGQLHLRCYTTSARRLIDWSCTYGPGTPTELIVSGVLAA
LTPVPVARADAGEYTVWAAVPIPFAVELSHDTAHAATQRLRAWGWPYATIGPARSAPPTGAPAPQSDTP

Sequences:

>Translated_149_residues
MSMPPIRPPFDFPAFLKERGFSRLRERPDVYLNDRVEIEHDGGQLHLRCYTTSARRLIDWSCTYGPGTPTELIVSGVLAA
LTPVPVARADAGEYTVWAAVPIPFAVELSHDTAHAATQRLRAWGWPYATIGPARSAPPTGAPAPQSDTP
>Mature_148_residues
SMPPIRPPFDFPAFLKERGFSRLRERPDVYLNDRVEIEHDGGQLHLRCYTTSARRLIDWSCTYGPGTPTELIVSGVLAAL
TPVPVARADAGEYTVWAAVPIPFAVELSHDTAHAATQRLRAWGWPYATIGPARSAPPTGAPAPQSDTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16306; Mature: 16174

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPPIRPPFDFPAFLKERGFSRLRERPDVYLNDRVEIEHDGGQLHLRCYTTSARRLIDW
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEEECCCEEEEEEEECCCCEEEEE
SCTYGPGTPTELIVSGVLAALTPVPVARADAGEYTVWAAVPIPFAVELSHDTAHAATQRL
EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHH
RAWGWPYATIGPARSAPPTGAPAPQSDTP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SMPPIRPPFDFPAFLKERGFSRLRERPDVYLNDRVEIEHDGGQLHLRCYTTSARRLIDW
CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEEECCCEEEEEEEECCCCEEEEE
SCTYGPGTPTELIVSGVLAALTPVPVARADAGEYTVWAAVPIPFAVELSHDTAHAATQRL
EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHH
RAWGWPYATIGPARSAPPTGAPAPQSDTP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA