Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318478

Identifier: 158318478

GI number: 158318478

Start: 8204384

End: 8204884

Strand: Direct

Name: 158318478

Synonym: Franean1_6746

Alternate gene names: NA

Gene position: 8204384-8204884 (Clockwise)

Preceding gene: 158318477

Following gene: 158318479

Centisome position: 91.34

GC content: 68.66

Gene sequence:

>501_bases
GTGGTGATTCCGGCGGCCCCGACGGCCCCGATACGTCGACGCCGTCTCGATCCCACTGACATTCCCGCGATGGAAAGGAT
CGTCGGCGGAGGTCTGCATCCGGTCAGCCTCACCGACCCGGAAAGCAGCCTCTACCTCCCCGCTCCAGGCCCGAAAACCC
GGCCCCTCAACGAGAGGGCGACCGCGCTGGCCGCGTTCCACACCCGCCCGTTCCAGCCGCAGACATTCCTCCGGGGTGAC
GCAATCCTCACCGGCCCCACTCGTGAGGACGGCCAGGACACCGACACACCCGACGACCTGATCCGGCTCCTCGACGCCCC
TCAATTCCGCGTCCGGACCAAGAGCCCCGGCGACCAACGGTGGAGCAGCGGGGGCAATGTCCACCCCAGTCTGCGCCACG
CCTATACCCACACCTGCAAAACCGTCCTTCGGATACCGGTCGACGACAGGCCGCTCATCCGCATCGTCGCCGTCACCCCC
GGCGCAAGGCGCCGCCGGTGA

Upstream 100 bases:

>100_bases
TGCGCGCCTGGGGATGGCCCTACGCCACGATCGGCCCGGCCCGATCCGCCCCGCCGACCGGCGCCCCGGCCCCGCAGTCG
GACACACCGTGATCATCGTT

Downstream 100 bases:

>100_bases
CAGCCCGCCCGACGTCCCGGAGCACCACCAAGTCGCGCCCGCCGCCGACATCCACCCGCACCACTCCCGCCGCCCCCAGG
CCCGGCCGGCGTCGAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MVIPAAPTAPIRRRRLDPTDIPAMERIVGGGLHPVSLTDPESSLYLPAPGPKTRPLNERATALAAFHTRPFQPQTFLRGD
AILTGPTREDGQDTDTPDDLIRLLDAPQFRVRTKSPGDQRWSSGGNVHPSLRHAYTHTCKTVLRIPVDDRPLIRIVAVTP
GARRRR

Sequences:

>Translated_166_residues
MVIPAAPTAPIRRRRLDPTDIPAMERIVGGGLHPVSLTDPESSLYLPAPGPKTRPLNERATALAAFHTRPFQPQTFLRGD
AILTGPTREDGQDTDTPDDLIRLLDAPQFRVRTKSPGDQRWSSGGNVHPSLRHAYTHTCKTVLRIPVDDRPLIRIVAVTP
GARRRR
>Mature_166_residues
MVIPAAPTAPIRRRRLDPTDIPAMERIVGGGLHPVSLTDPESSLYLPAPGPKTRPLNERATALAAFHTRPFQPQTFLRGD
AILTGPTREDGQDTDTPDDLIRLLDAPQFRVRTKSPGDQRWSSGGNVHPSLRHAYTHTCKTVLRIPVDDRPLIRIVAVTP
GARRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18370; Mature: 18370

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIPAAPTAPIRRRRLDPTDIPAMERIVGGGLHPVSLTDPESSLYLPAPGPKTRPLNERA
CCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCEECCCCCCEEECCCCCCCCCCCHHH
TALAAFHTRPFQPQTFLRGDAILTGPTREDGQDTDTPDDLIRLLDAPQFRVRTKSPGDQR
HHHHHHCCCCCCCCCEECCCEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHH
WSSGGNVHPSLRHAYTHTCKTVLRIPVDDRPLIRIVAVTPGARRRR
HCCCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MVIPAAPTAPIRRRRLDPTDIPAMERIVGGGLHPVSLTDPESSLYLPAPGPKTRPLNERA
CCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCEECCCCCCEEECCCCCCCCCCCHHH
TALAAFHTRPFQPQTFLRGDAILTGPTREDGQDTDTPDDLIRLLDAPQFRVRTKSPGDQR
HHHHHHCCCCCCCCCEECCCEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHH
WSSGGNVHPSLRHAYTHTCKTVLRIPVDDRPLIRIVAVTPGARRRR
HCCCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA