| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318462
Identifier: 158318462
GI number: 158318462
Start: 8185512
End: 8186501
Strand: Direct
Name: 158318462
Synonym: Franean1_6730
Alternate gene names: NA
Gene position: 8185512-8186501 (Clockwise)
Preceding gene: 158318461
Following gene: 158318463
Centisome position: 91.13
GC content: 73.33
Gene sequence:
>990_bases GTGAGCGGCGGTGAGCAGACCCTGCTGGAGGTGTCCGGGCGGATGACCAGCCGGGACCGGTGGATGTTCGCGATGCTGCA CGAACACCGGGTCCTGACCCGCCACCAGCTCACCCGCCTGGCGTTCACCGGTGACCGGATGACCCGGCTGCGTCTGGCGA CCCTGACCCGGCTGCAGACCGTTGACCGGCTTCGCCCCTACTACGGTCAAGGCCGGGGTACCGGCCCCTACCATTACGCC CTCGGTCCGCTCGGTGCGGCGATCCTCGCCGCCGAGCGCGGTCTGAGTGTGGCCGAGCTCGGCTACCGCCGCGACAAGCT GCACGCCTGGGCGAACTCGCCGCGCCTCGGTCACCACCTCGGCGTCAATGCGGTGTTCACCGCCCTCGTCCACGCCAGCC GCCCCCGCCCCGACCATGAAGGGCTCACCGTCTGGTGGTCCGAACAGCGCGCCGCCGCGCTGTGGGGGCAGTGGATTCGC CCCGACGGCTACGGCACCTGGCAGACCGCCCGGCGCCGGCTCGACTTCTTCGTCGAGTTCGACACGGGCAGCGAAAGCCT CTCCCAGGTCGCCCGCAAGATCCCCGGCTACACCCGTCTCGCCGCCTCCAGCGGCCTGACCAGCCCCGTGCTGATCTGGC TACCGTCCGCGACCCGGGAACGGGAGCTGCGCGCCCGGCTCGCCGCGACCCCGGCCGGGGTCGTCATCGTCACCGCCGCC CCTGCCCCCCTCACCACCAGCCCCCTCTCACCCTCCGCGCCCTCCACCGAACCGCCTGACCTCGCCCCTGCCCGTCCGGT CTGGCTGCCGCTGAACGCCACCGCCCGGACCGACCTCGATGGGCTCACCACCCGCTACGGCACCCCGATCGTCAGCCGTT CCCCGTTCGACGAGCCCGACCCCACCGACGACGACGAGACCGATCCGGCGCCGGCACCGCGCCCACCCGCGCCGCACTTC GGGCCGCGGTCCCCCCTCGGCCCTGCGTGA
Upstream 100 bases:
>100_bases TCGCTGGCCGCGCTGATGCGCTGCGGGTTGCGGCACGCCGGCACACCGGCGCACCCGATGCCGGGCGCGGCCCCCGGTCC GGTCAGGGCGGGGGTGGCCA
Downstream 100 bases:
>100_bases CCCGGCTCGTCCTCGGACTGTGCGCGCTGCTGCTCGCCGTACCGATCCTCGCCGGCGGCGTCGCGGCCGGACTCCTCGGC GGCGAGGCCGGCGGCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSGGEQTLLEVSGRMTSRDRWMFAMLHEHRVLTRHQLTRLAFTGDRMTRLRLATLTRLQTVDRLRPYYGQGRGTGPYHYA LGPLGAAILAAERGLSVAELGYRRDKLHAWANSPRLGHHLGVNAVFTALVHASRPRPDHEGLTVWWSEQRAAALWGQWIR PDGYGTWQTARRRLDFFVEFDTGSESLSQVARKIPGYTRLAASSGLTSPVLIWLPSATRERELRARLAATPAGVVIVTAA PAPLTTSPLSPSAPSTEPPDLAPARPVWLPLNATARTDLDGLTTRYGTPIVSRSPFDEPDPTDDDETDPAPAPRPPAPHF GPRSPLGPA
Sequences:
>Translated_329_residues MSGGEQTLLEVSGRMTSRDRWMFAMLHEHRVLTRHQLTRLAFTGDRMTRLRLATLTRLQTVDRLRPYYGQGRGTGPYHYA LGPLGAAILAAERGLSVAELGYRRDKLHAWANSPRLGHHLGVNAVFTALVHASRPRPDHEGLTVWWSEQRAAALWGQWIR PDGYGTWQTARRRLDFFVEFDTGSESLSQVARKIPGYTRLAASSGLTSPVLIWLPSATRERELRARLAATPAGVVIVTAA PAPLTTSPLSPSAPSTEPPDLAPARPVWLPLNATARTDLDGLTTRYGTPIVSRSPFDEPDPTDDDETDPAPAPRPPAPHF GPRSPLGPA >Mature_328_residues SGGEQTLLEVSGRMTSRDRWMFAMLHEHRVLTRHQLTRLAFTGDRMTRLRLATLTRLQTVDRLRPYYGQGRGTGPYHYAL GPLGAAILAAERGLSVAELGYRRDKLHAWANSPRLGHHLGVNAVFTALVHASRPRPDHEGLTVWWSEQRAAALWGQWIRP DGYGTWQTARRRLDFFVEFDTGSESLSQVARKIPGYTRLAASSGLTSPVLIWLPSATRERELRARLAATPAGVVIVTAAP APLTTSPLSPSAPSTEPPDLAPARPVWLPLNATARTDLDGLTTRYGTPIVSRSPFDEPDPTDDDETDPAPAPRPPAPHFG PRSPLGPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36128; Mature: 35997
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGEQTLLEVSGRMTSRDRWMFAMLHEHRVLTRHQLTRLAFTGDRMTRLRLATLTRLQT CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH VDRLRPYYGQGRGTGPYHYALGPLGAAILAAERGLSVAELGYRRDKLHAWANSPRLGHHL HHHHCCHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCCHHH GVNAVFTALVHASRPRPDHEGLTVWWSEQRAAALWGQWIRPDGYGTWQTARRRLDFFVEF HHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHHCCEEEEEEE DTGSESLSQVARKIPGYTRLAASSGLTSPVLIWLPSATRERELRARLAATPAGVVIVTAA CCCHHHHHHHHHHCCCCEEEHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEC PAPLTTSPLSPSAPSTEPPDLAPARPVWLPLNATARTDLDGLTTRYGTPIVSRSPFDEPD CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC PTDDDETDPAPAPRPPAPHFGPRSPLGPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGGEQTLLEVSGRMTSRDRWMFAMLHEHRVLTRHQLTRLAFTGDRMTRLRLATLTRLQT CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH VDRLRPYYGQGRGTGPYHYALGPLGAAILAAERGLSVAELGYRRDKLHAWANSPRLGHHL HHHHCCHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCCHHH GVNAVFTALVHASRPRPDHEGLTVWWSEQRAAALWGQWIRPDGYGTWQTARRRLDFFVEF HHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHHCCEEEEEEE DTGSESLSQVARKIPGYTRLAASSGLTSPVLIWLPSATRERELRARLAATPAGVVIVTAA CCCHHHHHHHHHHCCCCEEEHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEC PAPLTTSPLSPSAPSTEPPDLAPARPVWLPLNATARTDLDGLTTRYGTPIVSRSPFDEPD CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC PTDDDETDPAPAPRPPAPHFGPRSPLGPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA