Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318461

Identifier: 158318461

GI number: 158318461

Start: 8183023

End: 8185515

Strand: Direct

Name: 158318461

Synonym: Franean1_6729

Alternate gene names: NA

Gene position: 8183023-8185515 (Clockwise)

Preceding gene: 158318460

Following gene: 158318462

Centisome position: 91.1

GC content: 73.85

Gene sequence:

>2493_bases
ATGATCGTTGCTGTTTCGGCCCCTCCGCCGGGGCTTCCCCCCGTCCCTCCTCCACCCCCTCCACCGGCTCCGGAGCTGCC
GGTCTGGCTCACCGACCCCAGCCGGATCGTCTCTGGCTTGGAGTCGTGGCTGGCCGCCCACGCCGACTGGTGGCCGGTCG
CTGTCCTCGAGCTCGTTCTCCTGCTGGCCGCGGGGTACGCCCGCCGCCGGGTTCGCGCCCATCGGCATGTGGTGCTGTGT
GAGGGGGCGCGGACGGTGGAGATCCTCACCCCGCCCGAGGTATCCGCCCACGCGGCGGAGATCTTCTGGGGTCAGATGGG
CGGCCTGCAACGGGCGCGCTGGGACCGGCTCCTGCATGGCCAGCCGCATCTGGGCTGGGAACTGCTCGCCACCCGCGCGG
GGACGGTGATCCGGCTGTGGGTCCCCGGCCCGGTGCCGCCGGGCATGGTCGAGCGGGCGGTGCAGGCCGCGTGGCCCGGT
GCCCGCACTACGACCCGGCCTGCCGCCGCGCCGCTGCCGGACTACGCGCTGGCGATCGGCGGGCAGCTACGTCTGGCCCA
GGTCGACGTGCTGCCGCTACGCGCGGACCCGTCCGGGGACCCGATCCGGTCCCTGCTGTCTGCCGCCTCCGAACTCGACG
ACAACGAGGCGGCGGTGGTGCAGCTGCTGGCCCGGCCGGTCACGGGCCGCCGGCTCACGCTCGCCCGCCGCGCCGCTGCC
CGCCAGCGGGGCCAGTACGCCCCGACCCTGCTCAGCCGCGCCCTCGACCTGATCACCCCCCACGCCGGGCCCCGCCCGGC
CGCCGGGCAGGTGGTGGGCAAGACGGGGCCGACACCGCCGGAGGACTCCGCGGCGTCCCGCGCAATCGGCCTCAAAGCAG
TCGGCCCCCGCTGGGAAGCCACGGTCACCTACGCCGCAGCTCACCTCGCCCCGCCGATGACCAAGACCGGGCAGCAGGCC
GCCACGACGATGCTGCGCGGCCGGGCACACGCCCTCGCCTCCGCGTTCGCGTTGTACGCCGGGCACAACTATCTGCGCCG
CCTGAAACTGCCCCACCCCATCCCCGTGCTGGCGGGCCGCCGGCTGCGGCGCGGGGACCTGCTCGCGGTCGCCGAACTCG
CCGCCCTCGCCCACCTGCCCCTGGACACCGCTGTCCCGGGGCTGTCCCGGGCCGGGGCCGCGGCCGTCGCGCCCCCGGCC
GGGATCCCCGAAGCCGGACCCCGGGTCAAGCCGCTAGGGGAGAGCGAAGCGGGCCGGCGCCGCCGGGTCGGGTTGAACGT
CGCCGACGCCCGCCATCACGTGCACGTCGTCGGCGCGACCGGGTCGGGGAAATCGACGCTGCTCGCGAACATGATCCTCG
CCGATGCGGAAGCCGGCCGGGGGCTGGCGGTCTTCGACCCGAAAGGCGACCTGGTCAACGACGTCCTCGCCCGCCTCCCC
GCGGACGCCGCTGACCGGGTCGTGCTCCTCGACCCCGAGGACGCTGCCGCCCCACCCTGCTTGAACATCCTCGACGGCGG
CGACGCCGATCTGGCCACCGACCAGCTGGTCGGGATCTTCCGGCGGATCTGGGCCGACTCCTGGGGGCCGCGGACCGATG
ACCTGCTGCGCGCCACCTGCCTGACCCTGCTGGAACGGCGCACCCGCACCGGGATCACCCCGACGTTGGGCGACGTCGTC
AAGGTCCTCACCGAACCGGACACACGACGTAAAGCCACCACCGGAGTCACCGACCCGATCCTCGCCAGCTTCTGGGAGTG
GTACGGGCAGCTGTCTGACGGTGCCCGCGCGGCGGCGATCGGCCCGATCCTGAACAAACTCCGCGCCCTGCTGCTCCGCA
CCTTCGCCCGCCAAGCCCTGGCCGCCGGCCCGTCCACCGTCGACCTACGCGAGGTCCTCGACCGCGGCGGGATCCTCCTC
GTACGCATCCCCAAAGGCGTGATCGGGGAGGACGCCTCCCGGATCGTCGGGTCGATCGTGTTGGCGAAGATCTGGCAGAC
CGTCCTACACCGGGCCCGCCTGCACCCCGACCAGCGCCCCGACGCCACCTGTTTTTTGGACGAAGCCCAAAACTTCCTCA
CGCTGCCGGGGGCGGTGGAGGACATGCTCGCCGAGGCCCGCGGCTACCGGCTGTCCATGACCCTGGCCCACCAGCACCTG
CGTCAACTCCCCGACGATTTGGCCGACGCCCTGTCCACCAACGCGCGCAGCAAACTGTTCTTCGGCGTCAGCCCGAAAGA
CGCCGCGGACCTGTCCCGGCATGTCAGCCCCGTCCTGACCCAGCATGACCTCGCCCGGCTCCCCGCGTGGACGGCCGCAG
CCCGGCTGGTGGTCGACCAGGCCGACACCGCGGCGTTCACCCTGCGGACCCGGCCTCTGCCACCACCTGTCGCTGGCCGC
GCTGATGCGCTGCGGGTTGCGGCACGCCGGCACACCGGCGCACCCGATGCCGGGCGCGGCCCCCGGTCCGGTCAGGGCGG
GGGTGGCCAGTGA

Upstream 100 bases:

>100_bases
CGCCGGGTGGTGCCGCCCCGGACGGCCGGCCGCAGCACCACCCGGGCCACCCCACCTCTGCCACGCCCTGTTTGTGCTGC
TCACATGCCTGGAGGCATGC

Downstream 100 bases:

>100_bases
GCGGCGGTGAGCAGACCCTGCTGGAGGTGTCCGGGCGGATGACCAGCCGGGACCGGTGGATGTTCGCGATGCTGCACGAA
CACCGGGTCCTGACCCGCCA

Product: Type IV secretory pathway VirD4 protein-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 830; Mature: 830

Protein sequence:

>830_residues
MIVAVSAPPPGLPPVPPPPPPPAPELPVWLTDPSRIVSGLESWLAAHADWWPVAVLELVLLLAAGYARRRVRAHRHVVLC
EGARTVEILTPPEVSAHAAEIFWGQMGGLQRARWDRLLHGQPHLGWELLATRAGTVIRLWVPGPVPPGMVERAVQAAWPG
ARTTTRPAAAPLPDYALAIGGQLRLAQVDVLPLRADPSGDPIRSLLSAASELDDNEAAVVQLLARPVTGRRLTLARRAAA
RQRGQYAPTLLSRALDLITPHAGPRPAAGQVVGKTGPTPPEDSAASRAIGLKAVGPRWEATVTYAAAHLAPPMTKTGQQA
ATTMLRGRAHALASAFALYAGHNYLRRLKLPHPIPVLAGRRLRRGDLLAVAELAALAHLPLDTAVPGLSRAGAAAVAPPA
GIPEAGPRVKPLGESEAGRRRRVGLNVADARHHVHVVGATGSGKSTLLANMILADAEAGRGLAVFDPKGDLVNDVLARLP
ADAADRVVLLDPEDAAAPPCLNILDGGDADLATDQLVGIFRRIWADSWGPRTDDLLRATCLTLLERRTRTGITPTLGDVV
KVLTEPDTRRKATTGVTDPILASFWEWYGQLSDGARAAAIGPILNKLRALLLRTFARQALAAGPSTVDLREVLDRGGILL
VRIPKGVIGEDASRIVGSIVLAKIWQTVLHRARLHPDQRPDATCFLDEAQNFLTLPGAVEDMLAEARGYRLSMTLAHQHL
RQLPDDLADALSTNARSKLFFGVSPKDAADLSRHVSPVLTQHDLARLPAWTAAARLVVDQADTAAFTLRTRPLPPPVAGR
ADALRVAARRHTGAPDAGRGPRSGQGGGGQ

Sequences:

>Translated_830_residues
MIVAVSAPPPGLPPVPPPPPPPAPELPVWLTDPSRIVSGLESWLAAHADWWPVAVLELVLLLAAGYARRRVRAHRHVVLC
EGARTVEILTPPEVSAHAAEIFWGQMGGLQRARWDRLLHGQPHLGWELLATRAGTVIRLWVPGPVPPGMVERAVQAAWPG
ARTTTRPAAAPLPDYALAIGGQLRLAQVDVLPLRADPSGDPIRSLLSAASELDDNEAAVVQLLARPVTGRRLTLARRAAA
RQRGQYAPTLLSRALDLITPHAGPRPAAGQVVGKTGPTPPEDSAASRAIGLKAVGPRWEATVTYAAAHLAPPMTKTGQQA
ATTMLRGRAHALASAFALYAGHNYLRRLKLPHPIPVLAGRRLRRGDLLAVAELAALAHLPLDTAVPGLSRAGAAAVAPPA
GIPEAGPRVKPLGESEAGRRRRVGLNVADARHHVHVVGATGSGKSTLLANMILADAEAGRGLAVFDPKGDLVNDVLARLP
ADAADRVVLLDPEDAAAPPCLNILDGGDADLATDQLVGIFRRIWADSWGPRTDDLLRATCLTLLERRTRTGITPTLGDVV
KVLTEPDTRRKATTGVTDPILASFWEWYGQLSDGARAAAIGPILNKLRALLLRTFARQALAAGPSTVDLREVLDRGGILL
VRIPKGVIGEDASRIVGSIVLAKIWQTVLHRARLHPDQRPDATCFLDEAQNFLTLPGAVEDMLAEARGYRLSMTLAHQHL
RQLPDDLADALSTNARSKLFFGVSPKDAADLSRHVSPVLTQHDLARLPAWTAAARLVVDQADTAAFTLRTRPLPPPVAGR
ADALRVAARRHTGAPDAGRGPRSGQGGGGQ
>Mature_830_residues
MIVAVSAPPPGLPPVPPPPPPPAPELPVWLTDPSRIVSGLESWLAAHADWWPVAVLELVLLLAAGYARRRVRAHRHVVLC
EGARTVEILTPPEVSAHAAEIFWGQMGGLQRARWDRLLHGQPHLGWELLATRAGTVIRLWVPGPVPPGMVERAVQAAWPG
ARTTTRPAAAPLPDYALAIGGQLRLAQVDVLPLRADPSGDPIRSLLSAASELDDNEAAVVQLLARPVTGRRLTLARRAAA
RQRGQYAPTLLSRALDLITPHAGPRPAAGQVVGKTGPTPPEDSAASRAIGLKAVGPRWEATVTYAAAHLAPPMTKTGQQA
ATTMLRGRAHALASAFALYAGHNYLRRLKLPHPIPVLAGRRLRRGDLLAVAELAALAHLPLDTAVPGLSRAGAAAVAPPA
GIPEAGPRVKPLGESEAGRRRRVGLNVADARHHVHVVGATGSGKSTLLANMILADAEAGRGLAVFDPKGDLVNDVLARLP
ADAADRVVLLDPEDAAAPPCLNILDGGDADLATDQLVGIFRRIWADSWGPRTDDLLRATCLTLLERRTRTGITPTLGDVV
KVLTEPDTRRKATTGVTDPILASFWEWYGQLSDGARAAAIGPILNKLRALLLRTFARQALAAGPSTVDLREVLDRGGILL
VRIPKGVIGEDASRIVGSIVLAKIWQTVLHRARLHPDQRPDATCFLDEAQNFLTLPGAVEDMLAEARGYRLSMTLAHQHL
RQLPDDLADALSTNARSKLFFGVSPKDAADLSRHVSPVLTQHDLARLPAWTAAARLVVDQADTAAFTLRTRPLPPPVAGR
ADALRVAARRHTGAPDAGRGPRSGQGGGGQ

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88121; Mature: 88121

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVAVSAPPPGLPPVPPPPPPPAPELPVWLTDPSRIVSGLESWLAAHADWWPVAVLELVL
CEEEECCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LLAAGYARRRVRAHRHVVLCEGARTVEILTPPEVSAHAAEIFWGQMGGLQRARWDRLLHG
HHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCC
QPHLGWELLATRAGTVIRLWVPGPVPPGMVERAVQAAWPGARTTTRPAAAPLPDYALAIG
CCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC
GQLRLAQVDVLPLRADPSGDPIRSLLSAASELDDNEAAVVQLLARPVTGRRLTLARRAAA
CEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
RQRGQYAPTLLSRALDLITPHAGPRPAAGQVVGKTGPTPPEDSAASRAIGLKAVGPRWEA
HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHCCCEECCCCCCH
TVTYAAAHLAPPMTKTGQQAATTMLRGRAHALASAFALYAGHNYLRRLKLPHPIPVLAGR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
RLRRGDLLAVAELAALAHLPLDTAVPGLSRAGAAAVAPPAGIPEAGPRVKPLGESEAGRR
CCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
RRVGLNVADARHHVHVVGATGSGKSTLLANMILADAEAGRGLAVFDPKGDLVNDVLARLP
HHCCCCEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCC
ADAADRVVLLDPEDAAAPPCLNILDGGDADLATDQLVGIFRRIWADSWGPRTDDLLRATC
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LTLLERRTRTGITPTLGDVVKVLTEPDTRRKATTGVTDPILASFWEWYGQLSDGARAAAI
HHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH
GPILNKLRALLLRTFARQALAAGPSTVDLREVLDRGGILLVRIPKGVIGEDASRIVGSIV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH
LAKIWQTVLHRARLHPDQRPDATCFLDEAQNFLTLPGAVEDMLAEARGYRLSMTLAHQHL
HHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCEEECCHHHHHHHHHHCCCEEEHHHHHHHH
RQLPDDLADALSTNARSKLFFGVSPKDAADLSRHVSPVLTQHDLARLPAWTAAARLVVDQ
HHCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
ADTAAFTLRTRPLPPPVAGRADALRVAARRHTGAPDAGRGPRSGQGGGGQ
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVAVSAPPPGLPPVPPPPPPPAPELPVWLTDPSRIVSGLESWLAAHADWWPVAVLELVL
CEEEECCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LLAAGYARRRVRAHRHVVLCEGARTVEILTPPEVSAHAAEIFWGQMGGLQRARWDRLLHG
HHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCC
QPHLGWELLATRAGTVIRLWVPGPVPPGMVERAVQAAWPGARTTTRPAAAPLPDYALAIG
CCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC
GQLRLAQVDVLPLRADPSGDPIRSLLSAASELDDNEAAVVQLLARPVTGRRLTLARRAAA
CEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
RQRGQYAPTLLSRALDLITPHAGPRPAAGQVVGKTGPTPPEDSAASRAIGLKAVGPRWEA
HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHCCCEECCCCCCH
TVTYAAAHLAPPMTKTGQQAATTMLRGRAHALASAFALYAGHNYLRRLKLPHPIPVLAGR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
RLRRGDLLAVAELAALAHLPLDTAVPGLSRAGAAAVAPPAGIPEAGPRVKPLGESEAGRR
CCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
RRVGLNVADARHHVHVVGATGSGKSTLLANMILADAEAGRGLAVFDPKGDLVNDVLARLP
HHCCCCEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCC
ADAADRVVLLDPEDAAAPPCLNILDGGDADLATDQLVGIFRRIWADSWGPRTDDLLRATC
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LTLLERRTRTGITPTLGDVVKVLTEPDTRRKATTGVTDPILASFWEWYGQLSDGARAAAI
HHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH
GPILNKLRALLLRTFARQALAAGPSTVDLREVLDRGGILLVRIPKGVIGEDASRIVGSIV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH
LAKIWQTVLHRARLHPDQRPDATCFLDEAQNFLTLPGAVEDMLAEARGYRLSMTLAHQHL
HHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCEEECCHHHHHHHHHHCCCEEEHHHHHHHH
RQLPDDLADALSTNARSKLFFGVSPKDAADLSRHVSPVLTQHDLARLPAWTAAARLVVDQ
HHCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
ADTAAFTLRTRPLPPPVAGRADALRVAARRHTGAPDAGRGPRSGQGGGGQ
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA