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The map label for this gene is yddH [H]

Identifier: 158318463

GI number: 158318463

Start: 8186498

End: 8187424

Strand: Direct

Name: yddH [H]

Synonym: Franean1_6731

Alternate gene names: 158318463

Gene position: 8186498-8187424 (Clockwise)

Preceding gene: 158318462

Following gene: 158318464

Centisome position: 91.14

GC content: 69.36

Gene sequence:

>927_bases
GTGACCCGGCTCGTCCTCGGACTGTGCGCGCTGCTGCTCGCCGTACCGATCCTCGCCGGCGGCGTCGCGGCCGGACTCCT
CGGCGGCGAGGCCGGCGGCGGCGAGCCGGCATCCGCCGCGGCCGCCGCGGGGGAGATCCCTGTCGACTACCAGCGGCTCT
ACGTCACCGCTGCGGCCACCTGCCCGGGGCTGCCGTGGACGGTGCTGGCCGCGGTCGGGAAAGTCGAGACCGACCACGGG
CAGAACCCGGACTGGACCTCGCTGGCCGGCGCCCAGGGGCCGATGCAGTTTCTGCCTACCACCTTCGCCGCCTATGGGGT
CGACGGCGACGCCGACGGCAGCACCGACATCAACAATCCCGCCGACGCTGTCTACTCCGCCGCCCATTATCTGTGTGCCT
CCGGCGCACAGAACGGCGCGAATATTCCCGGGGCGCTCTACACCTATAATCATGATAATTCTTACGTGACGCGGGTTCTC
ACCCAGGCCGACGTTTACACCACCTCCGACCTCACCACCAGCAGCGGCCCGTCGGACGCGGCGCTGACCGCGGTGGACTA
CGCCACCGCGCAGATCGGCCTGCCGTATCTGTGGGGTGGGGACGGCCCCGATTATGGCGAGAAAGGCTTTGATTGTTCGG
GGCTTACCCGGGCCGCCTACGCCGCCGCCGGAGTCACCATCCCCCGCGTCGCGCAGGCCCAGTTCAACGCCGGACCACGA
CTACCCCCAGGGGCCCCACTGGAAATCGGAGACCTCGTATTCTACGGCCCGTCCGACATTGACATCACCCACGTGGGAAT
TTACCTTGGCAGCGGGGAAATGGTGAACGCGCCCCGGCGCGGGGCCCCGGTCCGGACCGAAACCTACGTCCGACCCAGCT
ACCGCGGAGCCACCCGACCCGTCCCCGCGTCGGCCGGCTTTCCCTGA

Upstream 100 bases:

>100_bases
TCGACGAGCCCGACCCCACCGACGACGACGAGACCGATCCGGCGCCGGCACCGCGCCCACCCGCGCCGCACTTCGGGCCG
CGGTCCCCCCTCGGCCCTGC

Downstream 100 bases:

>100_bases
CCCCGAGCCGCCTGCGCCGCCCGGCTGCGGTGGCGCAGGCGGGCCCGAGGGACGCTTACAGCGGAGGCCCCTCCAGCCAT
GCAGGGAAAATCCGAACCCC

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTRLVLGLCALLLAVPILAGGVAAGLLGGEAGGGEPASAAAAAGEIPVDYQRLYVTAAATCPGLPWTVLAAVGKVETDHG
QNPDWTSLAGAQGPMQFLPTTFAAYGVDGDADGSTDINNPADAVYSAAHYLCASGAQNGANIPGALYTYNHDNSYVTRVL
TQADVYTTSDLTTSSGPSDAALTAVDYATAQIGLPYLWGGDGPDYGEKGFDCSGLTRAAYAAAGVTIPRVAQAQFNAGPR
LPPGAPLEIGDLVFYGPSDIDITHVGIYLGSGEMVNAPRRGAPVRTETYVRPSYRGATRPVPASAGFP

Sequences:

>Translated_308_residues
MTRLVLGLCALLLAVPILAGGVAAGLLGGEAGGGEPASAAAAAGEIPVDYQRLYVTAAATCPGLPWTVLAAVGKVETDHG
QNPDWTSLAGAQGPMQFLPTTFAAYGVDGDADGSTDINNPADAVYSAAHYLCASGAQNGANIPGALYTYNHDNSYVTRVL
TQADVYTTSDLTTSSGPSDAALTAVDYATAQIGLPYLWGGDGPDYGEKGFDCSGLTRAAYAAAGVTIPRVAQAQFNAGPR
LPPGAPLEIGDLVFYGPSDIDITHVGIYLGSGEMVNAPRRGAPVRTETYVRPSYRGATRPVPASAGFP
>Mature_307_residues
TRLVLGLCALLLAVPILAGGVAAGLLGGEAGGGEPASAAAAAGEIPVDYQRLYVTAAATCPGLPWTVLAAVGKVETDHGQ
NPDWTSLAGAQGPMQFLPTTFAAYGVDGDADGSTDINNPADAVYSAAHYLCASGAQNGANIPGALYTYNHDNSYVTRVLT
QADVYTTSDLTTSSGPSDAALTAVDYATAQIGLPYLWGGDGPDYGEKGFDCSGLTRAAYAAAGVTIPRVAQAQFNAGPRL
PPGAPLEIGDLVFYGPSDIDITHVGIYLGSGEMVNAPRRGAPVRTETYVRPSYRGATRPVPASAGFP

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=136, Percent_Identity=36.7647058823529, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786421, Length=131, Percent_Identity=31.2977099236641, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 31370; Mature: 31239

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLVLGLCALLLAVPILAGGVAAGLLGGEAGGGEPASAAAAAGEIPVDYQRLYVTAAAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEECC
CPGLPWTVLAAVGKVETDHGQNPDWTSLAGAQGPMQFLPTTFAAYGVDGDADGSTDINNP
CCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
ADAVYSAAHYLCASGAQNGANIPGALYTYNHDNSYVTRVLTQADVYTTSDLTTSSGPSDA
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCEEECCCCCCCCCCCCC
ALTAVDYATAQIGLPYLWGGDGPDYGEKGFDCSGLTRAAYAAAGVTIPRVAQAQFNAGPR
EEEHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCC
LPPGAPLEIGDLVFYGPSDIDITHVGIYLGSGEMVNAPRRGAPVRTETYVRPSYRGATRP
CCCCCCCEECCEEEECCCCCCEEEEEEEECCCCEECCCCCCCCCCCEEEECCCCCCCCCC
VPASAGFP
CCCCCCCC
>Mature Secondary Structure 
TRLVLGLCALLLAVPILAGGVAAGLLGGEAGGGEPASAAAAAGEIPVDYQRLYVTAAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEECC
CPGLPWTVLAAVGKVETDHGQNPDWTSLAGAQGPMQFLPTTFAAYGVDGDADGSTDINNP
CCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
ADAVYSAAHYLCASGAQNGANIPGALYTYNHDNSYVTRVLTQADVYTTSDLTTSSGPSDA
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCEEECCCCCCCCCCCCC
ALTAVDYATAQIGLPYLWGGDGPDYGEKGFDCSGLTRAAYAAAGVTIPRVAQAQFNAGPR
EEEHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCC
LPPGAPLEIGDLVFYGPSDIDITHVGIYLGSGEMVNAPRRGAPVRTETYVRPSYRGATRP
CCCCCCCEECCEEEECCCCCCEEEEEEEECCCCEECCCCCCCCCCCEEEECCCCCCCCCC
VPASAGFP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]