Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is pgpB [C]

Identifier: 158318424

GI number: 158318424

Start: 8128294

End: 8129076

Strand: Reverse

Name: pgpB [C]

Synonym: Franean1_6692

Alternate gene names: 158318424

Gene position: 8129076-8128294 (Counterclockwise)

Preceding gene: 158318444

Following gene: 158318423

Centisome position: 90.5

GC content: 72.8

Gene sequence:

>783_bases
ATGTGCCGACAGGGACTCCCGTTGACGGACATGCGTCGACCCGGCGGGCAACTGGTGCGCTCGACCTCTGACCGGCTGGT
GGGCCCGCCCGGTTCGGAGCGGGCCCGCACCGAGACCATCCGGTACACCGTCGCCGGAGCGGCGGGGGTCCTGCTCACGG
TGCTGCTGGGCGCCGTCGTCCTCCGGAGTGGAACGCCGCTCGGGCTCGATGCCGGGTGGCACCGGTGGGTGTTGGCTCAC
CGTAACCCCGGGCTGTCCGATGTCGCGGTCGCCGTCACCGACACCGGCGTCGGTGCCTGCGCCTACTGTCTTGCCGCGGT
CGCCGGCGCCCTGGCGGTGCCGCGGTGGTCGCGGTGGTGGCGGTGGTGGCTGGGCGCCGTCGCCGGGGTCGTGGCGCTGC
TGCTGGGACAGCTGTTGAGGACCTCGCTGGCGGTCATCGTCGGCCGGGCGCGACCGCCGGTGGCGGACTGGATAACCTAT
CCGTCCGGCTTCGCGTTTCCGTCCGGCCACACGACCACCTCGGCGCTGGTCGCCGCGGGTCTCGCCGCGGTGCTGTACCG
CCGGGCCCGCAGGCGCTCCACCAGGGTCGCGGCTGTCGCCGTCCCGGGCATCTGGGCGTTCACTGTGGGGCTCAGCCGGA
TCTACCTCGGGGTGCACTGGCCCACTGATGTTTTCGCCGGATGGCTGTTGGCCACAGTCCTCGCTGTTGTCTGCCTGCCG
TTGCTGGGCGCCCTGTTCGCGTGGATCGGCCGGGATCAGCCAGACCGGCCGGACCCCCGCTGA

Upstream 100 bases:

>100_bases
TTGAAAACGATCATCATCGGCTGTGTCGCGGCGCCTGACATCAAGGCGGGGGCCATCGTGTCCCGACGGGCCTTGCCGGC
GACCCGTGTAATGATCACCG

Downstream 100 bases:

>100_bases
TCGCCACCTCCTGACGGACCATACGGGATCGCCTCACCGGCCTCCTCGCCGCTCTTCCGGCGTCGGGCCGGCCGAGGCAG
GTGTGGAACAGATCGAAGCA

Product: PA-phosphatase-like phosphoesterase

Products: Phospatidylglycerol; Phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVVLRSGTPLGLDAGWHRWVLAH
RNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWWRWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITY
PSGFAFPSGHTTTSALVAAGLAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP
LLGALFAWIGRDQPDRPDPR

Sequences:

>Translated_260_residues
MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVVLRSGTPLGLDAGWHRWVLAH
RNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWWRWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITY
PSGFAFPSGHTTTSALVAAGLAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP
LLGALFAWIGRDQPDRPDPR
>Mature_260_residues
MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVVLRSGTPLGLDAGWHRWVLAH
RNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWWRWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITY
PSGFAFPSGHTTTSALVAAGLAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP
LLGALFAWIGRDQPDRPDPR

Specific function: Hydrolyzes Phosphatidylglycerophosphate, Phosphatidic Acid, And Lysophosphatidic Acid; The Pattern Of Activities Varies According To Subcellular Location. [C]

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Integral Membrane Protein. Inner And Outer Membranes [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.27 [C]

Molecular weight: Translated: 27695; Mature: 27695

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVV
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHEEHHHHHHHHHHHHHHHHH
LRSGTPLGLDAGWHRWVLAHRNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWW
HHCCCCCCCCCCHHHEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHH
RWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITYPSGFAFPSGHTTTSALVAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHH
LAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP
HHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHH
LLGALFAWIGRDQPDRPDPR
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVV
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHEEHHHHHHHHHHHHHHHHH
LRSGTPLGLDAGWHRWVLAHRNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWW
HHCCCCCCCCCCHHHEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHH
RWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITYPSGFAFPSGHTTTSALVAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHH
LAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP
HHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHH
LLGALFAWIGRDQPDRPDPR
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; Phosphatidylglycerophosphate [C]

Specific reaction: H2O + (0.02) Phosphatidylglycerophosphate --> (0.02) Phospatidylglycerol + Phosphate [C]

General reaction: Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA