| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pgpB [C]
Identifier: 158318424
GI number: 158318424
Start: 8128294
End: 8129076
Strand: Reverse
Name: pgpB [C]
Synonym: Franean1_6692
Alternate gene names: 158318424
Gene position: 8129076-8128294 (Counterclockwise)
Preceding gene: 158318444
Following gene: 158318423
Centisome position: 90.5
GC content: 72.8
Gene sequence:
>783_bases ATGTGCCGACAGGGACTCCCGTTGACGGACATGCGTCGACCCGGCGGGCAACTGGTGCGCTCGACCTCTGACCGGCTGGT GGGCCCGCCCGGTTCGGAGCGGGCCCGCACCGAGACCATCCGGTACACCGTCGCCGGAGCGGCGGGGGTCCTGCTCACGG TGCTGCTGGGCGCCGTCGTCCTCCGGAGTGGAACGCCGCTCGGGCTCGATGCCGGGTGGCACCGGTGGGTGTTGGCTCAC CGTAACCCCGGGCTGTCCGATGTCGCGGTCGCCGTCACCGACACCGGCGTCGGTGCCTGCGCCTACTGTCTTGCCGCGGT CGCCGGCGCCCTGGCGGTGCCGCGGTGGTCGCGGTGGTGGCGGTGGTGGCTGGGCGCCGTCGCCGGGGTCGTGGCGCTGC TGCTGGGACAGCTGTTGAGGACCTCGCTGGCGGTCATCGTCGGCCGGGCGCGACCGCCGGTGGCGGACTGGATAACCTAT CCGTCCGGCTTCGCGTTTCCGTCCGGCCACACGACCACCTCGGCGCTGGTCGCCGCGGGTCTCGCCGCGGTGCTGTACCG CCGGGCCCGCAGGCGCTCCACCAGGGTCGCGGCTGTCGCCGTCCCGGGCATCTGGGCGTTCACTGTGGGGCTCAGCCGGA TCTACCTCGGGGTGCACTGGCCCACTGATGTTTTCGCCGGATGGCTGTTGGCCACAGTCCTCGCTGTTGTCTGCCTGCCG TTGCTGGGCGCCCTGTTCGCGTGGATCGGCCGGGATCAGCCAGACCGGCCGGACCCCCGCTGA
Upstream 100 bases:
>100_bases TTGAAAACGATCATCATCGGCTGTGTCGCGGCGCCTGACATCAAGGCGGGGGCCATCGTGTCCCGACGGGCCTTGCCGGC GACCCGTGTAATGATCACCG
Downstream 100 bases:
>100_bases TCGCCACCTCCTGACGGACCATACGGGATCGCCTCACCGGCCTCCTCGCCGCTCTTCCGGCGTCGGGCCGGCCGAGGCAG GTGTGGAACAGATCGAAGCA
Product: PA-phosphatase-like phosphoesterase
Products: Phospatidylglycerol; Phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVVLRSGTPLGLDAGWHRWVLAH RNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWWRWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITY PSGFAFPSGHTTTSALVAAGLAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP LLGALFAWIGRDQPDRPDPR
Sequences:
>Translated_260_residues MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVVLRSGTPLGLDAGWHRWVLAH RNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWWRWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITY PSGFAFPSGHTTTSALVAAGLAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP LLGALFAWIGRDQPDRPDPR >Mature_260_residues MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVVLRSGTPLGLDAGWHRWVLAH RNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWWRWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITY PSGFAFPSGHTTTSALVAAGLAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP LLGALFAWIGRDQPDRPDPR
Specific function: Hydrolyzes Phosphatidylglycerophosphate, Phosphatidic Acid, And Lysophosphatidic Acid; The Pattern Of Activities Varies According To Subcellular Location. [C]
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Integral Membrane Protein. Inner And Outer Membranes [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.27 [C]
Molecular weight: Translated: 27695; Mature: 27695
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVV CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHEEHHHHHHHHHHHHHHHHH LRSGTPLGLDAGWHRWVLAHRNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWW HHCCCCCCCCCCHHHEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHH RWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITYPSGFAFPSGHTTTSALVAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHH LAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP HHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHH LLGALFAWIGRDQPDRPDPR HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MCRQGLPLTDMRRPGGQLVRSTSDRLVGPPGSERARTETIRYTVAGAAGVLLTVLLGAVV CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHEEHHHHHHHHHHHHHHHHH LRSGTPLGLDAGWHRWVLAHRNPGLSDVAVAVTDTGVGACAYCLAAVAGALAVPRWSRWW HHCCCCCCCCCCHHHEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHH RWWLGAVAGVVALLLGQLLRTSLAVIVGRARPPVADWITYPSGFAFPSGHTTTSALVAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHH LAAVLYRRARRRSTRVAAVAVPGIWAFTVGLSRIYLGVHWPTDVFAGWLLATVLAVVCLP HHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHH LLGALFAWIGRDQPDRPDPR HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; Phosphatidylglycerophosphate [C]
Specific reaction: H2O + (0.02) Phosphatidylglycerophosphate --> (0.02) Phospatidylglycerol + Phosphate [C]
General reaction: Phosphoric ester hydrolysis [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA