| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318444
Identifier: 158318444
GI number: 158318444
Start: 8153556
End: 8154269
Strand: Reverse
Name: 158318444
Synonym: Franean1_6712
Alternate gene names: NA
Gene position: 8154269-8153556 (Counterclockwise)
Preceding gene: 158318446
Following gene: 158318424
Centisome position: 90.78
GC content: 71.29
Gene sequence:
>714_bases ATGCCGCCGGCCCCGCGCCGGCGCATCGCCCCAGGTCACAGGCTCAAGCCGACTTCTGGCACCCCACAGGCGGTCGAGAT CGGCTCGGGAACCGGCCGGGTCGCCCTCCCCCTCGCCCGCACGGGGGTCCCGGTCGTCGGGATCGACGCCTCCGGCGAGA TGACCCGCCAGCTGCACCGTTCCTCCATGACGGAGGGGCTTGCGGTCACCGCGGTCGAAGCCGACGCGGCGACCTTCACT GTCGCCGACCCGGTTCCGCTGATCTACGCCGTGTTCAACACGTTCTTCCTCCTCGCCGACCGCGACGTCCAGGCCCGGTT CCTGAGCCAGGCCACGAAGGCTCTCGGCGACGGCGGATCGCTGGTGCTGGAGACGTTCGTGCCCCGGCCCGGACGGCTGC CCGACGGGCCGCATCCCGGCGTGTTCCCCGCCGACTCCGCCGTGGTCGTCAAGCAGCGCAGCACCGACCGCGTGGTGCTG TTCGCCGCCACAAACACTGTCACCGAACGCACCTTCGACTACCACGAGATCGTGCTGGCCGACGGGGCACCGGTCCGGAT GTACCCGGGCCGGATGCTCTACCTGTGGCCCGAGGAGATCGACGCCTTGGCAGCAGCCGCCGGTCTCCGACTCGCGCACC GGTGGGGCGACTGGGACGCCACCGCCTACGACCCCAACACGGCCCGCAAGCACGTCTCGGTGTATCGCCGCTGA
Upstream 100 bases:
>100_bases TCGATGTTCTTCGACGCCGACGAGCGGCCGAGTAGAACCAGCCAGCTACAGACCCGAACGAAGATCAGGTACAGCAGGCG TACGGACATAGTTGACCATC
Downstream 100 bases:
>100_bases GCGGCGGCTCCCGCGCTCAGCAGCGAGCGACGTCGCGGCGGTCGCAGGCGTGGGCCGCGAGGTCGCGGCAGACCACGGCG AAGTCGAGACCGGCGGCGTG
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Methyltransferase Type; Methyltransferase Protein; Methyltransferase Family Protein; SAM-Dependent Methyltransferase; Dimethyladenosine Transferase
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MPPAPRRRIAPGHRLKPTSGTPQAVEIGSGTGRVALPLARTGVPVVGIDASGEMTRQLHRSSMTEGLAVTAVEADAATFT VADPVPLIYAVFNTFFLLADRDVQARFLSQATKALGDGGSLVLETFVPRPGRLPDGPHPGVFPADSAVVVKQRSTDRVVL FAATNTVTERTFDYHEIVLADGAPVRMYPGRMLYLWPEEIDALAAAAGLRLAHRWGDWDATAYDPNTARKHVSVYRR
Sequences:
>Translated_237_residues MPPAPRRRIAPGHRLKPTSGTPQAVEIGSGTGRVALPLARTGVPVVGIDASGEMTRQLHRSSMTEGLAVTAVEADAATFT VADPVPLIYAVFNTFFLLADRDVQARFLSQATKALGDGGSLVLETFVPRPGRLPDGPHPGVFPADSAVVVKQRSTDRVVL FAATNTVTERTFDYHEIVLADGAPVRMYPGRMLYLWPEEIDALAAAAGLRLAHRWGDWDATAYDPNTARKHVSVYRR >Mature_236_residues PPAPRRRIAPGHRLKPTSGTPQAVEIGSGTGRVALPLARTGVPVVGIDASGEMTRQLHRSSMTEGLAVTAVEADAATFTV ADPVPLIYAVFNTFFLLADRDVQARFLSQATKALGDGGSLVLETFVPRPGRLPDGPHPGVFPADSAVVVKQRSTDRVVLF AATNTVTERTFDYHEIVLADGAPVRMYPGRMLYLWPEEIDALAAAAGLRLAHRWGDWDATAYDPNTARKHVSVYRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25593; Mature: 25462
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAPRRRIAPGHRLKPTSGTPQAVEIGSGTGRVALPLARTGVPVVGIDASGEMTRQLHR CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHCCCCEEEECCCCHHHHHHHH SSMTEGLAVTAVEADAATFTVADPVPLIYAVFNTFFLLADRDVQARFLSQATKALGDGGS HHHCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCC LVLETFVPRPGRLPDGPHPGVFPADSAVVVKQRSTDRVVLFAATNTVTERTFDYHEIVLA EEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHCCCCEEEEEEE DGAPVRMYPGRMLYLWPEEIDALAAAAGLRLAHRWGDWDATAYDPNTARKHVSVYRR CCCCEEECCCCEEEECHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure PPAPRRRIAPGHRLKPTSGTPQAVEIGSGTGRVALPLARTGVPVVGIDASGEMTRQLHR CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHCCCCEEEECCCCHHHHHHHH SSMTEGLAVTAVEADAATFTVADPVPLIYAVFNTFFLLADRDVQARFLSQATKALGDGGS HHHCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCC LVLETFVPRPGRLPDGPHPGVFPADSAVVVKQRSTDRVVLFAATNTVTERTFDYHEIVLA EEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHCCCCEEEEEEE DGAPVRMYPGRMLYLWPEEIDALAAAAGLRLAHRWGDWDATAYDPNTARKHVSVYRR CCCCEEECCCCEEEECHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA