| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318423
Identifier: 158318423
GI number: 158318423
Start: 8126462
End: 8127157
Strand: Reverse
Name: 158318423
Synonym: Franean1_6691
Alternate gene names: NA
Gene position: 8127157-8126462 (Counterclockwise)
Preceding gene: 158318424
Following gene: 158318418
Centisome position: 90.48
GC content: 66.38
Gene sequence:
>696_bases GTGGCTACTCGGATACCTAGGAGGAGAGCCGACCAGGGGACGGTTCGACTTAACACGCGCGATCTGCACGCGCTCGAGTG GATCTTCGATATGCATGCGGTCTTCGAGACCGACCTTCCTGACGTGCTCAACCCCGCTCGGCTCATCTCGAAGAACGCGG CACGGTCGATCGTGACCCGTTGGGCGAACGCCGGGGTCGCATGCGCCGAGCCGGTGCTTGCCAACCAGGGTCGTCTCGTC CGGCTGACGCCGGACGGGGAGAGGCTCGTCAGCACCGGTGATAGAGCCTCACCCGTGGCGGCACCGGGCGCGGCCGCGGC GGCTGTCCACCATGCGATGGTGGCGCGAGCGCGGCTGCGGCTGGAGCGCGACGGTCTCCCCGACCTGGTCGTCGTGGGCT GGCTCAGCGAACGGCAATGGCGGATGGAGAACCGGTCTCGGGTCGCCGCCGGCGAGCAGATACCCGACGGAATAGCGCGT CTGGACAGCGGCGACCTCTGCCCGGTGCACGTTGGGCACACGGGTGTCGAATTTATTCGGATCAGGTCAACTATTATGGA CCTCCTCGGCAAGTACGGGACCGTCATCGTCGCCGTACCTGGCGATATCGCGCCGCTCGCGCAGTCGACCTGGAACGGGC CGGACCTCTCCGGCTCCGGAGCGGATCGCAGTGGCCTGCACTTGATCATCATTTGA
Upstream 100 bases:
>100_bases CTCTTGTCTCATCGGGATCGTGATGGCTCTCAGGGTCAAAAGTCCTCTGGGAATCTACTTCCGTCCGGTGTACTGCGAGT GCGTGGAGGCAGCAGGAACG
Downstream 100 bases:
>100_bases GGGAACATCCCAGTTACGAGACGGTCGATGCGCGCCCGCACCGTGGAGGCCCGCCTACCGCGGGGATGCTCTCCGTGCCA CGCACCGCCTTCGAAGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MATRIPRRRADQGTVRLNTRDLHALEWIFDMHAVFETDLPDVLNPARLISKNAARSIVTRWANAGVACAEPVLANQGRLV RLTPDGERLVSTGDRASPVAAPGAAAAAVHHAMVARARLRLERDGLPDLVVVGWLSERQWRMENRSRVAAGEQIPDGIAR LDSGDLCPVHVGHTGVEFIRIRSTIMDLLGKYGTVIVAVPGDIAPLAQSTWNGPDLSGSGADRSGLHLIII
Sequences:
>Translated_231_residues MATRIPRRRADQGTVRLNTRDLHALEWIFDMHAVFETDLPDVLNPARLISKNAARSIVTRWANAGVACAEPVLANQGRLV RLTPDGERLVSTGDRASPVAAPGAAAAAVHHAMVARARLRLERDGLPDLVVVGWLSERQWRMENRSRVAAGEQIPDGIAR LDSGDLCPVHVGHTGVEFIRIRSTIMDLLGKYGTVIVAVPGDIAPLAQSTWNGPDLSGSGADRSGLHLIII >Mature_230_residues ATRIPRRRADQGTVRLNTRDLHALEWIFDMHAVFETDLPDVLNPARLISKNAARSIVTRWANAGVACAEPVLANQGRLVR LTPDGERLVSTGDRASPVAAPGAAAAAVHHAMVARARLRLERDGLPDLVVVGWLSERQWRMENRSRVAAGEQIPDGIARL DSGDLCPVHVGHTGVEFIRIRSTIMDLLGKYGTVIVAVPGDIAPLAQSTWNGPDLSGSGADRSGLHLIII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24942; Mature: 24811
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRIPRRRADQGTVRLNTRDLHALEWIFDMHAVFETDLPDVLNPARLISKNAARSIVTR CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH WANAGVACAEPVLANQGRLVRLTPDGERLVSTGDRASPVAAPGAAAAAVHHAMVARARLR HHCCCCHHCCHHHCCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LERDGLPDLVVVGWLSERQWRMENRSRVAAGEQIPDGIARLDSGDLCPVHVGHTGVEFIR HHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEECCCCHHHHH IRSTIMDLLGKYGTVIVAVPGDIAPLAQSTWNGPDLSGSGADRSGLHLIII HHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure ATRIPRRRADQGTVRLNTRDLHALEWIFDMHAVFETDLPDVLNPARLISKNAARSIVTR CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH WANAGVACAEPVLANQGRLVRLTPDGERLVSTGDRASPVAAPGAAAAAVHHAMVARARLR HHCCCCHHCCHHHCCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LERDGLPDLVVVGWLSERQWRMENRSRVAAGEQIPDGIARLDSGDLCPVHVGHTGVEFIR HHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEECCCCHHHHH IRSTIMDLLGKYGTVIVAVPGDIAPLAQSTWNGPDLSGSGADRSGLHLIII HHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA