| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318394
Identifier: 158318394
GI number: 158318394
Start: 8088185
End: 8089111
Strand: Direct
Name: 158318394
Synonym: Franean1_6659
Alternate gene names: NA
Gene position: 8088185-8089111 (Clockwise)
Preceding gene: 158318388
Following gene: 158318395
Centisome position: 90.05
GC content: 72.06
Gene sequence:
>927_bases GTGGCGCGACCGGGTTGTCACGTTGGCCACACACGGGAAACACCAGGGTGCTTCACTGCCACCGTGCCGCGACCGGACGT ACACGATGCGCATCGACATCTCGGGGTGCTGCCGGCCCACCCCTATTACGGTGGACCGCCGGTGGTCCCCGACGTCCGCG CCCGGGCGACGATCGCGCAGCTGCGCGCGGACCTGGACACCGAGCGGACGTCCGCGGCCGTGGTGATCCCGAACTACGGC GTGCCGAAGCCATCGGTCGCCTTCGGGTTCAACGAGCTCTGTGTCGAGGCGGCCCAGGTGGACGAGCGGATCCTGGCCGG CCTGTGGGTCTCGGCGCGGCCCGAGGACACCGAGGCCACCGAGCGCGCGCTGGCACTGGCGGGCGAGCGGGGCGTGGTCG CCCTCAAGCTCAGCTTCCTGCTGGGCGGGGACGTCACCGACCCGGCCTGCCGGAGCCGGCTGGACCGGATCTTCGCCGTC GCCCGCGCGCACGACCTCGTCGTGCACGTCCACACCTCGCCCGGGGGTGCCGCCGACATCGACCGGATGGGCACACTGGT CGACGACTACGCGGCCGAGGTCGCCGTCCATCTGGTCCATCTGGGCGGTGGCGCGAGTGGGCACATCAAGCTGATCGGCG GTCGCTTCTTCGACTGGGTCGCCGCCGGGCGCCGGGTCTACACAGACGCGAGCTGGGCGGTCGGCTTCGCGCCGCGGTGG TTCGCGGCGGAGGTGGCCCGCCGTGGCCTCGGCCACGACCGGCTGCTGTTCGCCAGCGACGAGCCGTGGAGCGACCACGA GGGCGAGCTCGCCCGGCTCACCGGTGCCATCGGCGACCCGGAGCTCGCCCGGAGGGTCTTCGCGGAGAACTTCCGCGACC TGTATCTGCGCGAACGGACACTGCGACCACACCCAGCGACTACTTAG
Upstream 100 bases:
>100_bases CAACAGAAAGATCACATCGAGTGAACAGAGGAACAGCTCCGACTACCCGGAGGGGTCACCACAGGACCAGGCCAGGGCGG CCAAGGGACCAAAAGAGCCA
Downstream 100 bases:
>100_bases TAACCGTCGGGCGGTCAAAATGTAAGTAGTCGATCACAACCGCCAGATTGAGACACACGGAGACCGAGACAGGAGCACGC ATGGAGCTGACGGAGCTGGA
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MARPGCHVGHTRETPGCFTATVPRPDVHDAHRHLGVLPAHPYYGGPPVVPDVRARATIAQLRADLDTERTSAAVVIPNYG VPKPSVAFGFNELCVEAAQVDERILAGLWVSARPEDTEATERALALAGERGVVALKLSFLLGGDVTDPACRSRLDRIFAV ARAHDLVVHVHTSPGGAADIDRMGTLVDDYAAEVAVHLVHLGGGASGHIKLIGGRFFDWVAAGRRVYTDASWAVGFAPRW FAAEVARRGLGHDRLLFASDEPWSDHEGELARLTGAIGDPELARRVFAENFRDLYLRERTLRPHPATT
Sequences:
>Translated_308_residues MARPGCHVGHTRETPGCFTATVPRPDVHDAHRHLGVLPAHPYYGGPPVVPDVRARATIAQLRADLDTERTSAAVVIPNYG VPKPSVAFGFNELCVEAAQVDERILAGLWVSARPEDTEATERALALAGERGVVALKLSFLLGGDVTDPACRSRLDRIFAV ARAHDLVVHVHTSPGGAADIDRMGTLVDDYAAEVAVHLVHLGGGASGHIKLIGGRFFDWVAAGRRVYTDASWAVGFAPRW FAAEVARRGLGHDRLLFASDEPWSDHEGELARLTGAIGDPELARRVFAENFRDLYLRERTLRPHPATT >Mature_307_residues ARPGCHVGHTRETPGCFTATVPRPDVHDAHRHLGVLPAHPYYGGPPVVPDVRARATIAQLRADLDTERTSAAVVIPNYGV PKPSVAFGFNELCVEAAQVDERILAGLWVSARPEDTEATERALALAGERGVVALKLSFLLGGDVTDPACRSRLDRIFAVA RAHDLVVHVHTSPGGAADIDRMGTLVDDYAAEVAVHLVHLGGGASGHIKLIGGRFFDWVAAGRRVYTDASWAVGFAPRWF AAEVARRGLGHDRLLFASDEPWSDHEGELARLTGAIGDPELARRVFAENFRDLYLRERTLRPHPATT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33340; Mature: 33209
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPGCHVGHTRETPGCFTATVPRPDVHDAHRHLGVLPAHPYYGGPPVVPDVRARATIAQ CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH LRADLDTERTSAAVVIPNYGVPKPSVAFGFNELCVEAAQVDERILAGLWVSARPEDTEAT HHHHCCCCCCCEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH ERALALAGERGVVALKLSFLLGGDVTDPACRSRLDRIFAVARAHDLVVHVHTSPGGAADI HHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCH DRMGTLVDDYAAEVAVHLVHLGGGASGHIKLIGGRFFDWVAAGRRVYTDASWAVGFAPRW HHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCHHHHHHHCCCEEEECCCEEECCCCHH FAAEVARRGLGHDRLLFASDEPWSDHEGELARLTGAIGDPELARRVFAENFRDLYLRERT HHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC LRPHPATT CCCCCCCC >Mature Secondary Structure ARPGCHVGHTRETPGCFTATVPRPDVHDAHRHLGVLPAHPYYGGPPVVPDVRARATIAQ CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH LRADLDTERTSAAVVIPNYGVPKPSVAFGFNELCVEAAQVDERILAGLWVSARPEDTEAT HHHHCCCCCCCEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH ERALALAGERGVVALKLSFLLGGDVTDPACRSRLDRIFAVARAHDLVVHVHTSPGGAADI HHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCH DRMGTLVDDYAAEVAVHLVHLGGGASGHIKLIGGRFFDWVAAGRRVYTDASWAVGFAPRW HHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCHHHHHHHCCCEEEECCCEEECCCCHH FAAEVARRGLGHDRLLFASDEPWSDHEGELARLTGAIGDPELARRVFAENFRDLYLRERT HHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC LRPHPATT CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA