| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318395
Identifier: 158318395
GI number: 158318395
Start: 8089192
End: 8089701
Strand: Direct
Name: 158318395
Synonym: Franean1_6660
Alternate gene names: NA
Gene position: 8089192-8089701 (Clockwise)
Preceding gene: 158318394
Following gene: 158318396
Centisome position: 90.06
GC content: 64.71
Gene sequence:
>510_bases ATGGAGCTGACGGAGCTGGAGCTCCAGAGCCTTACCGAGGTTCCGCACCCCTCGCTGCCGCCCGGGAGCAACCTGTACGG CTCGACGAAGCTCTTTCCCGACTACCAGGCCGAGGACGGCGAGTCCTACCTGACGCTCGTCCACGGCATCGCGCACGAGT CGTCGGTGAGCTTCGTCGCGATCCTTCAGGCCACCCGGGCACTGCGCAAGGGCTTCGAGTCCGTCATCTATTTCTACGGG CCCGGCGCGATGAACTGCATGGCCACCCGCGGGTTCCCGCACACCGGCGACTCCGCGTTCGCCGGCGAGCACAACATCAA CACCCAGATCGAGACCTTCATCAAGGAGGGCGGCAAAGTCTACGTCTGCCGGTTCGGGCTCTCCCTGCACGGCCTGCGCG AGGAGGACCTCATCGAGGGCGTCATCCCCGCGCACCCACTCGACATCCAGGACTGTGTCATCCATTACACCCGCAAGGGC GCGATCGTGAACTCGACGTACATGCTCTGA
Upstream 100 bases:
>100_bases CACACCCAGCGACTACTTAGTAACCGTCGGGCGGTCAAAATGTAAGTAGTCGATCACAACCGCCAGATTGAGACACACGG AGACCGAGACAGGAGCACGC
Downstream 100 bases:
>100_bases CGCCCCGCATCCGGCTCCAGACGCTCCCGGCTCCGCACCGCGGGCTCCAGCCACCGCAGGCTGCGATCACCGCGGGCAGC CGCCATCTGCCCGCCCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MELTELELQSLTEVPHPSLPPGSNLYGSTKLFPDYQAEDGESYLTLVHGIAHESSVSFVAILQATRALRKGFESVIYFYG PGAMNCMATRGFPHTGDSAFAGEHNINTQIETFIKEGGKVYVCRFGLSLHGLREEDLIEGVIPAHPLDIQDCVIHYTRKG AIVNSTYML
Sequences:
>Translated_169_residues MELTELELQSLTEVPHPSLPPGSNLYGSTKLFPDYQAEDGESYLTLVHGIAHESSVSFVAILQATRALRKGFESVIYFYG PGAMNCMATRGFPHTGDSAFAGEHNINTQIETFIKEGGKVYVCRFGLSLHGLREEDLIEGVIPAHPLDIQDCVIHYTRKG AIVNSTYML >Mature_169_residues MELTELELQSLTEVPHPSLPPGSNLYGSTKLFPDYQAEDGESYLTLVHGIAHESSVSFVAILQATRALRKGFESVIYFYG PGAMNCMATRGFPHTGDSAFAGEHNINTQIETFIKEGGKVYVCRFGLSLHGLREEDLIEGVIPAHPLDIQDCVIHYTRKG AIVNSTYML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18605; Mature: 18605
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTELELQSLTEVPHPSLPPGSNLYGSTKLFPDYQAEDGESYLTLVHGIAHESSVSFVA CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH ILQATRALRKGFESVIYFYGPGAMNCMATRGFPHTGDSAFAGEHNINTQIETFIKEGGKV HHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEE YVCRFGLSLHGLREEDLIEGVIPAHPLDIQDCVIHYTRKGAIVNSTYML EEEEECCEECCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCEECC >Mature Secondary Structure MELTELELQSLTEVPHPSLPPGSNLYGSTKLFPDYQAEDGESYLTLVHGIAHESSVSFVA CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH ILQATRALRKGFESVIYFYGPGAMNCMATRGFPHTGDSAFAGEHNINTQIETFIKEGGKV HHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEE YVCRFGLSLHGLREEDLIEGVIPAHPLDIQDCVIHYTRKGAIVNSTYML EEEEECCEECCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA