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The map label for this gene is nudF [H]

Identifier: 158318388

GI number: 158318388

Start: 8080110

End: 8081072

Strand: Direct

Name: nudF [H]

Synonym: Franean1_6653

Alternate gene names: 158318388

Gene position: 8080110-8081072 (Clockwise)

Preceding gene: 158318385

Following gene: 158318394

Centisome position: 89.96

GC content: 75.39

Gene sequence:

>963_bases
ATGACCACGCCGCCCGCCGCCGGCTCCCGCACCGCGCCCGGCTCCCGCCCCACGCCCGGCTCCGGCACGCCGTCCGGCGC
CGCGCTCGGCTCCGGCGCCGCGCCTGGTCCGGCCGAGATCCTCCCGGCCGAGATCGTCCCCGTTCCGCTGGCCGTGGATC
TCGTGGTGCTCACCGTGCGCGATGACACTCTCTGCGTCCTTCTGGTGCGGCGCGGGATCGAGCCGTTCGCGGGACGGTGG
GCTCTGCCCGGCGGGTTCGTCCGGCCCGACGAGGATCTCGACGCGGCCGCCGTCCGCGAGCTGCGGGAGGAGACCGGCCT
GGCGCGCTCCACCGGCCATCTCGAACAGCTCGCGACCTATGCGGACCTGGACCGCGACCCGCGCGGGCGGGTGGCCACGG
TCGCGTACCTGGCGCTCGCGCCCGACCTTCCGGTTCCCGTCGCCGGCACCGACGCGGCGGCCAGCCGGTGGTGGGCGGTC
ACCGACATCCCGCGAGCCGGCTCGGACGGCGACTCGGGCGCAAACGGTACGGACGGCGGCACAGGCGAAGGCGCGGGGAG
CGCGGACGGCGGCACAGGCGAAGGCGCGGGGAGCGCGGACGGCGGCGCAGGCGGGGACGGCCGCGCGGACGGCGGGATGA
CCGGGCTGGCCTTCGATCACGCCAGGATCCTGGCTGACGGGGTCGAACGTGCCCGTTCAAAGATCGAGTACAGCCCGGTG
GCGACGGCGTTCTGCCCGCCCGAGTTCACCGTCGCGCAGCTTCGGCGGATCTACGAGATCGTCTGGGGAACCCGGCTGGA
CCCTCGCAACTTCCACCGTAAGGTCACCCGCACGGCGGGCTTCCTCGTCCCGACCGGACGGACCACAACGCGGGACGGCG
GCCGTCCGGCCGAGCTCTTCACCCGCGGGGACGCCCGCCTGCTGCATCCGGCGATGCTGCGGCCGGAACCCGGAGACCGC
TGA

Upstream 100 bases:

>100_bases
TCGCCGGACCTCCTCACACTCTTATCGTCGAACTGACGATAAGAGGGACTGTAGAGCCCTACTCCCCTTCTCGTCAACCT
GACGAGATACCATCGCCGCC

Downstream 100 bases:

>100_bases
CCCGCCCAGCACCGTGTGTCGCCCGGGACCAACGCCCCGGAACGGCTCAGGAGCACCGAGACGGAACAGGCAGCGCCAAT
GCGGTCGTACCTGTGGACTC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTTPPAAGSRTAPGSRPTPGSGTPSGAALGSGAAPGPAEILPAEIVPVPLAVDLVVLTVRDDTLCVLLVRRGIEPFAGRW
ALPGGFVRPDEDLDAAAVRELREETGLARSTGHLEQLATYADLDRDPRGRVATVAYLALAPDLPVPVAGTDAAASRWWAV
TDIPRAGSDGDSGANGTDGGTGEGAGSADGGTGEGAGSADGGAGGDGRADGGMTGLAFDHARILADGVERARSKIEYSPV
ATAFCPPEFTVAQLRRIYEIVWGTRLDPRNFHRKVTRTAGFLVPTGRTTTRDGGRPAELFTRGDARLLHPAMLRPEPGDR

Sequences:

>Translated_320_residues
MTTPPAAGSRTAPGSRPTPGSGTPSGAALGSGAAPGPAEILPAEIVPVPLAVDLVVLTVRDDTLCVLLVRRGIEPFAGRW
ALPGGFVRPDEDLDAAAVRELREETGLARSTGHLEQLATYADLDRDPRGRVATVAYLALAPDLPVPVAGTDAAASRWWAV
TDIPRAGSDGDSGANGTDGGTGEGAGSADGGTGEGAGSADGGAGGDGRADGGMTGLAFDHARILADGVERARSKIEYSPV
ATAFCPPEFTVAQLRRIYEIVWGTRLDPRNFHRKVTRTAGFLVPTGRTTTRDGGRPAELFTRGDARLLHPAMLRPEPGDR
>Mature_319_residues
TTPPAAGSRTAPGSRPTPGSGTPSGAALGSGAAPGPAEILPAEIVPVPLAVDLVVLTVRDDTLCVLLVRRGIEPFAGRWA
LPGGFVRPDEDLDAAAVRELREETGLARSTGHLEQLATYADLDRDPRGRVATVAYLALAPDLPVPVAGTDAAASRWWAVT
DIPRAGSDGDSGANGTDGGTGEGAGSADGGTGEGAGSADGGAGGDGRADGGMTGLAFDHARILADGVERARSKIEYSPVA
TAFCPPEFTVAQLRRIYEIVWGTRLDPRNFHRKVTRTAGFLVPTGRTTTRDGGRPAELFTRGDARLLHPAMLRPEPGDR

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 32941; Mature: 32810

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPPAAGSRTAPGSRPTPGSGTPSGAALGSGAAPGPAEILPAEIVPVPLAVDLVVLTVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEEEEC
DDTLCVLLVRRGIEPFAGRWALPGGFVRPDEDLDAAAVRELREETGLARSTGHLEQLATY
CCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
ADLDRDPRGRVATVAYLALAPDLPVPVAGTDAAASRWWAVTDIPRAGSDGDSGANGTDGG
HHCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCC
TGEGAGSADGGTGEGAGSADGGAGGDGRADGGMTGLAFDHARILADGVERARSKIEYSPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCC
ATAFCPPEFTVAQLRRIYEIVWGTRLDPRNFHRKVTRTAGFLVPTGRTTTRDGGRPAELF
EEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHE
TRGDARLLHPAMLRPEPGDR
ECCCCCEECHHHCCCCCCCC
>Mature Secondary Structure 
TTPPAAGSRTAPGSRPTPGSGTPSGAALGSGAAPGPAEILPAEIVPVPLAVDLVVLTVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEEEEC
DDTLCVLLVRRGIEPFAGRWALPGGFVRPDEDLDAAAVRELREETGLARSTGHLEQLATY
CCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
ADLDRDPRGRVATVAYLALAPDLPVPVAGTDAAASRWWAVTDIPRAGSDGDSGANGTDGG
HHCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCC
TGEGAGSADGGTGEGAGSADGGAGGDGRADGGMTGLAFDHARILADGVERARSKIEYSPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCC
ATAFCPPEFTVAQLRRIYEIVWGTRLDPRNFHRKVTRTAGFLVPTGRTTTRDGGRPAELF
EEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHE
TRGDARLLHPAMLRPEPGDR
ECCCCCEECHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]