| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318364
Identifier: 158318364
GI number: 158318364
Start: 8060486
End: 8060623
Strand: Reverse
Name: 158318364
Synonym: Franean1_6629
Alternate gene names: NA
Gene position: 8060623-8060486 (Counterclockwise)
Preceding gene: 158318367
Following gene: 158318360
Centisome position: 89.74
GC content: 61.59
Gene sequence:
>138_bases GTGGGACTTCACCTGAGTCAGATCGCCGAGGCGGACGAGCTGCTGACCAACGACCCGCTGGCGCTGTTGATCGGGATGGT GCTGGACCAGCGGGATTCGGAAAGAACGAGCGAAAACGGACGTTCGGTGCCCGCTTAA
Upstream 100 bases:
>100_bases GCCGCTGGCGACTACGAAGCGTGCCGGGACAACGTAAACCACACGGCGATACGACCGGCGGCGCGACGGCCGCTGTTCCC AGGCCGGCTACGGTGTTCGC
Downstream 100 bases:
>100_bases ATGTGCAGGGTAGTCGTCGGGGTGTCGTTTGCTCTTGCAGGTGGAGGTAAAGACTGGACGGAAGGTCTCAGGCCTCCTTG AAGGGAACATCGTCCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MGLHLSQIAEADELLTNDPLALLIGMVLDQRDSERTSENGRSVPA
Sequences:
>Translated_45_residues MGLHLSQIAEADELLTNDPLALLIGMVLDQRDSERTSENGRSVPA >Mature_44_residues GLHLSQIAEADELLTNDPLALLIGMVLDQRDSERTSENGRSVPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4878; Mature: 4746
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLHLSQIAEADELLTNDPLALLIGMVLDQRDSERTSENGRSVPA CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLHLSQIAEADELLTNDPLALLIGMVLDQRDSERTSENGRSVPA CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA