Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318360

Identifier: 158318360

GI number: 158318360

Start: 8058126

End: 8058695

Strand: Reverse

Name: 158318360

Synonym: Franean1_6625

Alternate gene names: NA

Gene position: 8058695-8058126 (Counterclockwise)

Preceding gene: 158318364

Following gene: 158318357

Centisome position: 89.72

GC content: 71.4

Gene sequence:

>570_bases
ATGACCAGTGTGATCAACCAGATCGACCGTGCCCTCGACATGACCGCCGCCATCGTCAAGGGCATCACCGACGACCAGCT
CGCCGCCCCCACCCCCTGCCCGAAATGGGATGTGCGCACAGAACTCAACCACCTGGTGGGCGGCATGCGGATCTTCGCGG
CCGAGCTCACCACGACCGACGCCGGCGCCGACCACGACGCCGACTGGCTCGGTACCGGCCCCCAGGCCGCCTTCGCCACC
GCGGCCGACCTCGACCGCGCCGCCTGGCACCGCCGCAATGCGCTGGACACGACCGTGCGCCTGGGGTTCGGCGCCGTCCC
CGGGCCGATGGCTGCCCTCATCCACCTCACCGAGGTCCTGGTCCACGGCGCCGACCTGGCGATCGCCACCGGCCAGGAGC
ATCTCGTCGACGAGTGCGCATGCGGCGAACTGCTCACGACCACGCACGGCATGGACTTCGACGTCTTCCGCCGGCCTGGC
ATGTTCGGCCCCGCGGTCTCCGTCTCGGCCGACGCCCCCGCCCACCGGCAGTTGCTGGCCTTCCTCGGCCGTGCCCTCCC
ACCGCACTGA

Upstream 100 bases:

>100_bases
AGTCCGGCGCCCAGCGCCTGGCCTTCGCCCGCGTCTACGACTGGCTCGACGACGTCCCGGCCAAGGCAGCCTGAATCACC
TCAACCCCGGGGACTACGAC

Downstream 100 bases:

>100_bases
CCTACGGCTCCTCCACCCGTTCGGGTACCGCGAACGCCACCCCACCAGAACGCCGGCACCCCCGCGAAAGCCCCGCGTCC
GTGGCGTTGGGCGCCTCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTSVINQIDRALDMTAAIVKGITDDQLAAPTPCPKWDVRTELNHLVGGMRIFAAELTTTDAGADHDADWLGTGPQAAFAT
AADLDRAAWHRRNALDTTVRLGFGAVPGPMAALIHLTEVLVHGADLAIATGQEHLVDECACGELLTTTHGMDFDVFRRPG
MFGPAVSVSADAPAHRQLLAFLGRALPPH

Sequences:

>Translated_189_residues
MTSVINQIDRALDMTAAIVKGITDDQLAAPTPCPKWDVRTELNHLVGGMRIFAAELTTTDAGADHDADWLGTGPQAAFAT
AADLDRAAWHRRNALDTTVRLGFGAVPGPMAALIHLTEVLVHGADLAIATGQEHLVDECACGELLTTTHGMDFDVFRRPG
MFGPAVSVSADAPAHRQLLAFLGRALPPH
>Mature_188_residues
TSVINQIDRALDMTAAIVKGITDDQLAAPTPCPKWDVRTELNHLVGGMRIFAAELTTTDAGADHDADWLGTGPQAAFATA
ADLDRAAWHRRNALDTTVRLGFGAVPGPMAALIHLTEVLVHGADLAIATGQEHLVDECACGELLTTTHGMDFDVFRRPGM
FGPAVSVSADAPAHRQLLAFLGRALPPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017517
- InterPro:   IPR017520 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20036; Mature: 19905

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVINQIDRALDMTAAIVKGITDDQLAAPTPCPKWDVRTELNHLVGGMRIFAAELTTTD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
AGADHDADWLGTGPQAAFATAADLDRAAWHRRNALDTTVRLGFGAVPGPMAALIHLTEVL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
VHGADLAIATGQEHLVDECACGELLTTTHGMDFDVFRRPGMFGPAVSVSADAPAHRQLLA
HCCCCEEEECCHHHHHHHHHCCHHHHHCCCCCHHHHHCCCCCCCCEECCCCCCHHHHHHH
FLGRALPPH
HHHHCCCCC
>Mature Secondary Structure 
TSVINQIDRALDMTAAIVKGITDDQLAAPTPCPKWDVRTELNHLVGGMRIFAAELTTTD
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
AGADHDADWLGTGPQAAFATAADLDRAAWHRRNALDTTVRLGFGAVPGPMAALIHLTEVL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
VHGADLAIATGQEHLVDECACGELLTTTHGMDFDVFRRPGMFGPAVSVSADAPAHRQLLA
HCCCCEEEECCHHHHHHHHHCCHHHHHCCCCCHHHHHCCCCCCCCEECCCCCCHHHHHHH
FLGRALPPH
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]