| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yccK [H]
Identifier: 158318311
GI number: 158318311
Start: 8000632
End: 8001681
Strand: Reverse
Name: yccK [H]
Synonym: Franean1_6576
Alternate gene names: 158318311
Gene position: 8001681-8000632 (Counterclockwise)
Preceding gene: 158318312
Following gene: 158318310
Centisome position: 89.09
GC content: 74.67
Gene sequence:
>1050_bases ATGACCGCGCCAGCGACCCTGCGCACCACCCGACTGGGCCTGACCGACATGTCGATCACTCGGGTCGGGTTCGGCGCCTG GGCCATCGGCGGGGCGGACTGGGCGTTCGGCTGGGGGCGCCAGGACGACGACGAGGCGGTCGAGGCCATCCGGGCCGCGG TGCGGTCCGGGGTGAACTGGGTCGACACCGCCGCGGTCTACGGCCTCGGGCACTCCGAGGAGCTCGTCGGCCGGGCGCTG GCCGGCATCCCCGCCGAGCAACGTCCCTACGTGTTCACCAAGTGCGGCCTGGTCTGGGACGAGAGCGACCCGACGCGGCC CCCCCTGCGGGTCGGGGCGCCCGCCTCGATCCGCGCCGAGGTGGACGCGTCGCTGCGCCGGCTCGGGGTGGAGCGCATCG ACCTCTACCAGCTCCACTGGCCGCCGCAGGACGGGACCCCGATCGCCGAGGTTGTCGGCGCCCTGCACGAGCTCCGCGCC GCGGGCAAGATCCGCGCGGTCGGGGCGTCGAACTTCTCGGTCGCCCAGTTGGAGGCGGCGGCGACGGCGGGCGGTGTCGA CGTCCTGCAGCCGCCGTTCTCTCTGGTCAACCGACTGGCGGCCGCCGACCTGCTGCCGTACTGCGCCATGCGTGACATCG GTGTGATCGTCTACAGCCCGATGCAGTCCGGGCTGCTGACGGGCGGGTGGTCGGTGCAGCGCACCCGCGCGCTCGCCGAG GACGACTGGCGGCGGACGGCGGCGGAGTTCAACCCGCCGGCCCTCGAGCGCAACCTGGCCCTGGTCGATGTGCTGCGTCC GATAGCGGCCCGGCACGGCACGACGGTGGCCGCGGTGGCCGTCGCCTGGACGCTGGCCTTCGACGGGGTGACCGCCGCGA TCGTCGGGGCCCGGCGCCCGGACCAGATCGACGCCTGGCTGCCCGCGGGCGGCGCGGTGGTCCTGACCGACCTCGACCTG GACGAGATCGGCGTCGCGGTCGAACGTCTCGATGTGGGTGCGGGGCCGTCTCGGCAGGGCCCCGCGCTGCCTGGCAGCGC CCTCGTGTGA
Upstream 100 bases:
>100_bases CCCGGTAGCCCCGGCTCCGCGCCAGCACAGCCCTGCGCCAGCACAGCCGGCGCCAGCAGGGTCCCGTGCCAGCAGATCCC CGCACCGTGAGGAGACTCCG
Downstream 100 bases:
>100_bases GGACTCACAGCGTTCCTCCGGTCATCTGGAGAGGGTGTTCGGGGTGCGCGGTGGCTTCGGTGGAGTGGTCCGTGGCGCAC CGGCGTGACGAAGTCGATGT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTAPATLRTTRLGLTDMSITRVGFGAWAIGGADWAFGWGRQDDDEAVEAIRAAVRSGVNWVDTAAVYGLGHSEELVGRAL AGIPAEQRPYVFTKCGLVWDESDPTRPPLRVGAPASIRAEVDASLRRLGVERIDLYQLHWPPQDGTPIAEVVGALHELRA AGKIRAVGASNFSVAQLEAAATAGGVDVLQPPFSLVNRLAAADLLPYCAMRDIGVIVYSPMQSGLLTGGWSVQRTRALAE DDWRRTAAEFNPPALERNLALVDVLRPIAARHGTTVAAVAVAWTLAFDGVTAAIVGARRPDQIDAWLPAGGAVVLTDLDL DEIGVAVERLDVGAGPSRQGPALPGSALV
Sequences:
>Translated_349_residues MTAPATLRTTRLGLTDMSITRVGFGAWAIGGADWAFGWGRQDDDEAVEAIRAAVRSGVNWVDTAAVYGLGHSEELVGRAL AGIPAEQRPYVFTKCGLVWDESDPTRPPLRVGAPASIRAEVDASLRRLGVERIDLYQLHWPPQDGTPIAEVVGALHELRA AGKIRAVGASNFSVAQLEAAATAGGVDVLQPPFSLVNRLAAADLLPYCAMRDIGVIVYSPMQSGLLTGGWSVQRTRALAE DDWRRTAAEFNPPALERNLALVDVLRPIAARHGTTVAAVAVAWTLAFDGVTAAIVGARRPDQIDAWLPAGGAVVLTDLDL DEIGVAVERLDVGAGPSRQGPALPGSALV >Mature_348_residues TAPATLRTTRLGLTDMSITRVGFGAWAIGGADWAFGWGRQDDDEAVEAIRAAVRSGVNWVDTAAVYGLGHSEELVGRALA GIPAEQRPYVFTKCGLVWDESDPTRPPLRVGAPASIRAEVDASLRRLGVERIDLYQLHWPPQDGTPIAEVVGALHELRAA GKIRAVGASNFSVAQLEAAATAGGVDVLQPPFSLVNRLAAADLLPYCAMRDIGVIVYSPMQSGLLTGGWSVQRTRALAED DWRRTAAEFNPPALERNLALVDVLRPIAARHGTTVAAVAVAWTLAFDGVTAAIVGARRPDQIDAWLPAGGAVVLTDLDLD EIGVAVERLDVGAGPSRQGPALPGSALV
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=314, Percent_Identity=27.3885350318471, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI27436966, Length=303, Percent_Identity=27.3927392739274, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI27436962, Length=303, Percent_Identity=27.0627062706271, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI27436969, Length=314, Percent_Identity=24.203821656051, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI4504825, Length=314, Percent_Identity=24.203821656051, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI41152114, Length=203, Percent_Identity=29.064039408867, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI223718702, Length=203, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI27436971, Length=321, Percent_Identity=24.2990654205607, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI41327764, Length=128, Percent_Identity=31.25, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1788070, Length=335, Percent_Identity=36.1194029850746, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI87081735, Length=311, Percent_Identity=30.8681672025724, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1788081, Length=269, Percent_Identity=29.7397769516729, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1789375, Length=303, Percent_Identity=29.042904290429, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1789199, Length=326, Percent_Identity=24.8466257668712, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786400, Length=256, Percent_Identity=26.953125, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87082198, Length=335, Percent_Identity=24.7761194029851, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787674, Length=233, Percent_Identity=25.7510729613734, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI212645785, Length=318, Percent_Identity=24.5283018867925, Blast_Score=81, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6325169, Length=299, Percent_Identity=24.0802675585284, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323998, Length=307, Percent_Identity=26.0586319218241, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24646155, Length=225, Percent_Identity=29.3333333333333, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24646159, Length=178, Percent_Identity=33.1460674157303, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36811; Mature: 36680
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPATLRTTRLGLTDMSITRVGFGAWAIGGADWAFGWGRQDDDEAVEAIRAAVRSGVNW CCCCCCEEEEECCCCCCCHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH VDTAAVYGLGHSEELVGRALAGIPAEQRPYVFTKCGLVWDESDPTRPPLRVGAPASIRAE HHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCEEECCCCCCHHH VDASLRRLGVERIDLYQLHWPPQDGTPIAEVVGALHELRAAGKIRAVGASNFSVAQLEAA HHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH ATAGGVDVLQPPFSLVNRLAAADLLPYCAMRDIGVIVYSPMQSGLLTGGWSVQRTRALAE HCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHH DDWRRTAAEFNPPALERNLALVDVLRPIAARHGTTVAAVAVAWTLAFDGVTAAIVGARRP HHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCC DQIDAWLPAGGAVVLTDLDLDEIGVAVERLDVGAGPSRQGPALPGSALV CCCCEECCCCCEEEEEECCHHHHHHHHHHEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAPATLRTTRLGLTDMSITRVGFGAWAIGGADWAFGWGRQDDDEAVEAIRAAVRSGVNW CCCCCEEEEECCCCCCCHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH VDTAAVYGLGHSEELVGRALAGIPAEQRPYVFTKCGLVWDESDPTRPPLRVGAPASIRAE HHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCEEECCCCCCHHH VDASLRRLGVERIDLYQLHWPPQDGTPIAEVVGALHELRAAGKIRAVGASNFSVAQLEAA HHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH ATAGGVDVLQPPFSLVNRLAAADLLPYCAMRDIGVIVYSPMQSGLLTGGWSVQRTRALAE HCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHH DDWRRTAAEFNPPALERNLALVDVLRPIAARHGTTVAAVAVAWTLAFDGVTAAIVGARRP HHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCC DQIDAWLPAGGAVVLTDLDLDEIGVAVERLDVGAGPSRQGPALPGSALV CCCCEECCCCCEEEEEECCHHHHHHHHHHEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]