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The map label for this gene is 158318312

Identifier: 158318312

GI number: 158318312

Start: 8001932

End: 8003470

Strand: Reverse

Name: 158318312

Synonym: Franean1_6577

Alternate gene names: NA

Gene position: 8003470-8001932 (Counterclockwise)

Preceding gene: 158318313

Following gene: 158318311

Centisome position: 89.11

GC content: 75.24

Gene sequence:

>1539_bases
GTGGGCTCTTCGCGGGAGATCGAACGCAAGTACTCCGTCGACCAGAGCTTCGTACTTCCCCGGCTGACGCAGGTGGACGG
GGTCGCTACCGCCCGCACCCGCCGCACCGTCACCCTGGAGGCCGTCTACTACGACTCCGACGACCTGCGGCTGGCCCGCA
ACCGCATCACCCTGCGCCGCCGGACGGGCGGGGACGACGCCGGCTGGCACCTGAAGCTCCCCGTCGGCCCAGGGGTGCGT
GACGAGATCCACCGCCCGCTCGGCTCCCACGATCCGGTTCCCGACGATCTTGTCGACCTCGCCACCGTGCACCTGCGCGG
GGCGGAGCTGCGCCCGGTCGCCCGCCTGGTGACGCTGCGCACCGCCCGCCGCCTGCGCGACAAGGCGGGCTGTGACCTGG
CGGAGGTCGTCGACGACCAGGTGACGGCCCAGACGCTCGGCGCGACCACGGTCGTGCAGAAGTGGCGGGAGATCGAGGTC
GAGCTGGGCTCCGGTGACCCGGGCGTGCTCGACGCCGTCGAGGCCGTGCTGACCGCCGCCGGCGCCGAGCTGTCGGCCTC
GGCGTCGAAGCTGGCCCAGGTGCTCGGCCCGGCGCTGAGCGGCGCGCCCGGCCCGGACGTGCCGCGCGCCGCGGCGAAGC
TGCGCCGGCGGACCCCGGCCGGCGAGGTCGTCCGCGCCTACCTGGTCGCGCAGGTCGAGGCGCTGCTCGCCACCGACCCG
CGGGTGCGCCTGGACGCGCCCGACGCGGTGCACCGGATGCGGGTGGCCTGCCGGCGGACCCGCAGCACCCTGCGGACCTT
CGCGCCCTTCTTCCCCGCGGAGCTGGTCGCGCACCTCGACGTCGAGCTGCGCGACCTGGCCGGGGCGCTGTCCGCCGCGC
GCGACGCCGAGGTACAGATCGCCTACTTCGCGGGCCGGCTCGATGACCTGCCCGCCGACCTGCTGCGCGGGGACGTCGTG
GGCGCGATCTCGGCCCGGCTCGCGGCCGACCAGACGGCTGCCCGGGCCCAGGCGCTGGAGATGCTGCGCAGCGAGCGTTA
TCTGACCCTCGTGGAGGATCTGCTCGCGCTCGTCAACGGCCCGTTCGTCGGGCGTTCGGGCAAGCCTGCGGAGAAGGTGC
TACCCGGTCTCCTGCACGACGCCGACCGGCGGCTGAGCCGCAAGGTCAGCCGGGCCGCCCCCCTGCCGGTGGGCACCGAA
CGTGACGAGCTCCTGCACTCCGCGCGCAAGCAGGCGAAGCGGCTGCGCTACGCGGCCGAGGTGGTCGGGCCGGTGTACGG
CCCGCCCGCGGCCGCGTTCGCCCGGCTCGCCGAGTCGATGCAGGAGCTGCTCGGCACCCACCAGGACGCGACGATCGCCC
GCGGCCTGCTGCGCGACTGGGGGGTCGAGGCGCAGACAGCCGGCGAGCCGACCGCTTACACCCTGGGCGTACTGCTCGGG
TTGGAGGAGTGCCGCGCCCGCACCGCCGAACGGGACTTCTTCGACCTGTGGCCGGACGCGTCGGCGCGCCGGCACCGGCG
CTGGTTCGCCCGCCGCTGA

Upstream 100 bases:

>100_bases
GGCCAGCGGCCGCGGGTGGCGGTGCGGAGGCGCTGGCGCCGCGGGCGCTTGCGGGCGCCGCGGGCGCTTGCGGGCACTGA
GGGCGCGGAAAGGAGCGGGC

Downstream 100 bases:

>100_bases
CCCGTCCGATGCCGGCCCGGCCCCGTCCGCGCCGGCCGGGCGCGTGTGATGCTGGTCGCACATGTTGCGCAGAGTGGCGG
TATGGTGCCGTCCGAGTGGG

Product: CHAD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MGSSREIERKYSVDQSFVLPRLTQVDGVATARTRRTVTLEAVYYDSDDLRLARNRITLRRRTGGDDAGWHLKLPVGPGVR
DEIHRPLGSHDPVPDDLVDLATVHLRGAELRPVARLVTLRTARRLRDKAGCDLAEVVDDQVTAQTLGATTVVQKWREIEV
ELGSGDPGVLDAVEAVLTAAGAELSASASKLAQVLGPALSGAPGPDVPRAAAKLRRRTPAGEVVRAYLVAQVEALLATDP
RVRLDAPDAVHRMRVACRRTRSTLRTFAPFFPAELVAHLDVELRDLAGALSAARDAEVQIAYFAGRLDDLPADLLRGDVV
GAISARLAADQTAARAQALEMLRSERYLTLVEDLLALVNGPFVGRSGKPAEKVLPGLLHDADRRLSRKVSRAAPLPVGTE
RDELLHSARKQAKRLRYAAEVVGPVYGPPAAAFARLAESMQELLGTHQDATIARGLLRDWGVEAQTAGEPTAYTLGVLLG
LEECRARTAERDFFDLWPDASARRHRRWFARR

Sequences:

>Translated_512_residues
MGSSREIERKYSVDQSFVLPRLTQVDGVATARTRRTVTLEAVYYDSDDLRLARNRITLRRRTGGDDAGWHLKLPVGPGVR
DEIHRPLGSHDPVPDDLVDLATVHLRGAELRPVARLVTLRTARRLRDKAGCDLAEVVDDQVTAQTLGATTVVQKWREIEV
ELGSGDPGVLDAVEAVLTAAGAELSASASKLAQVLGPALSGAPGPDVPRAAAKLRRRTPAGEVVRAYLVAQVEALLATDP
RVRLDAPDAVHRMRVACRRTRSTLRTFAPFFPAELVAHLDVELRDLAGALSAARDAEVQIAYFAGRLDDLPADLLRGDVV
GAISARLAADQTAARAQALEMLRSERYLTLVEDLLALVNGPFVGRSGKPAEKVLPGLLHDADRRLSRKVSRAAPLPVGTE
RDELLHSARKQAKRLRYAAEVVGPVYGPPAAAFARLAESMQELLGTHQDATIARGLLRDWGVEAQTAGEPTAYTLGVLLG
LEECRARTAERDFFDLWPDASARRHRRWFARR
>Mature_511_residues
GSSREIERKYSVDQSFVLPRLTQVDGVATARTRRTVTLEAVYYDSDDLRLARNRITLRRRTGGDDAGWHLKLPVGPGVRD
EIHRPLGSHDPVPDDLVDLATVHLRGAELRPVARLVTLRTARRLRDKAGCDLAEVVDDQVTAQTLGATTVVQKWREIEVE
LGSGDPGVLDAVEAVLTAAGAELSASASKLAQVLGPALSGAPGPDVPRAAAKLRRRTPAGEVVRAYLVAQVEALLATDPR
VRLDAPDAVHRMRVACRRTRSTLRTFAPFFPAELVAHLDVELRDLAGALSAARDAEVQIAYFAGRLDDLPADLLRGDVVG
AISARLAADQTAARAQALEMLRSERYLTLVEDLLALVNGPFVGRSGKPAEKVLPGLLHDADRRLSRKVSRAAPLPVGTER
DELLHSARKQAKRLRYAAEVVGPVYGPPAAAFARLAESMQELLGTHQDATIARGLLRDWGVEAQTAGEPTAYTLGVLLGL
EECRARTAERDFFDLWPDASARRHRRWFARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR007899
- InterPro:   IPR004206 [H]

Pfam domain/function: PF05235 CHAD; PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 55812; Mature: 55681

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSREIERKYSVDQSFVLPRLTQVDGVATARTRRTVTLEAVYYDSDDLRLARNRITLRR
CCCCHHHHHHHCCCHHHHCCHHHHHCCHHHHCCCEEEEEEEEEECCCCHHHHHHHHEEEE
RTGGDDAGWHLKLPVGPGVRDEIHRPLGSHDPVPDDLVDLATVHLRGAELRPVARLVTLR
CCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
TARRLRDKAGCDLAEVVDDQVTAQTLGATTVVQKWREIEVELGSGDPGVLDAVEAVLTAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHC
GAELSASASKLAQVLGPALSGAPGPDVPRAAAKLRRRTPAGEVVRAYLVAQVEALLATDP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
RVRLDAPDAVHRMRVACRRTRSTLRTFAPFFPAELVAHLDVELRDLAGALSAARDAEVQI
CEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEE
AYFAGRLDDLPADLLRGDVVGAISARLAADQTAARAQALEMLRSERYLTLVEDLLALVNG
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PFVGRSGKPAEKVLPGLLHDADRRLSRKVSRAAPLPVGTERDELLHSARKQAKRLRYAAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VVGPVYGPPAAAFARLAESMQELLGTHQDATIARGLLRDWGVEAQTAGEPTAYTLGVLLG
HHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LEECRARTAERDFFDLWPDASARRHRRWFARR
HHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
GSSREIERKYSVDQSFVLPRLTQVDGVATARTRRTVTLEAVYYDSDDLRLARNRITLRR
CCCHHHHHHHCCCHHHHCCHHHHHCCHHHHCCCEEEEEEEEEECCCCHHHHHHHHEEEE
RTGGDDAGWHLKLPVGPGVRDEIHRPLGSHDPVPDDLVDLATVHLRGAELRPVARLVTLR
CCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
TARRLRDKAGCDLAEVVDDQVTAQTLGATTVVQKWREIEVELGSGDPGVLDAVEAVLTAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHC
GAELSASASKLAQVLGPALSGAPGPDVPRAAAKLRRRTPAGEVVRAYLVAQVEALLATDP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
RVRLDAPDAVHRMRVACRRTRSTLRTFAPFFPAELVAHLDVELRDLAGALSAARDAEVQI
CEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEE
AYFAGRLDDLPADLLRGDVVGAISARLAADQTAARAQALEMLRSERYLTLVEDLLALVNG
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PFVGRSGKPAEKVLPGLLHDADRRLSRKVSRAAPLPVGTERDELLHSARKQAKRLRYAAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VVGPVYGPPAAAFARLAESMQELLGTHQDATIARGLLRDWGVEAQTAGEPTAYTLGVLLG
HHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LEECRARTAERDFFDLWPDASARRHRRWFARR
HHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]