| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318227
Identifier: 158318227
GI number: 158318227
Start: 7892294
End: 7894930
Strand: Direct
Name: 158318227
Synonym: Franean1_6492
Alternate gene names: NA
Gene position: 7892294-7894930 (Clockwise)
Preceding gene: 158318226
Following gene: 158318231
Centisome position: 87.87
GC content: 77.51
Gene sequence:
>2637_bases ATGGCCGTCCTCGGCGCGATCGGGATGATCGCGCGCAGTGAGCTGCGGCGGCGGTGGGCGGCGCTGATCGCCCTCGGCGT GCTCATCGGCATGGTCGTCGCCGTGGTCGCCGGGACGGCGGCGCTCGTCCGGCGCACCGCCACGGCGCACGACCGACTCG AGCGCGCCTCCTCGGTCGCCGACCTCCAGGTGAGCTACTTCAGCGACGACCCGGAGCTGGCCCGCAGGGTGGCCGCCATC CCGGGGGTCGCGCAGGCGTGGGCGGGCGTCGGGATGGTCGGACGGCTGGAGGACCAGCCGTCGCTGGCCTACATCGGCAT CATCGGCGGCCCGGCCGATCACCGCGGCCTGTACGAGCCCGTGGTGGTCCGTGGTCACGGGTATGACCCGGCCGCGCCGG ACGAGGCCGTCCTCGACGAGCGGGCGGCCGCCCGGTGGGGGGTGGGCGTCGGCGACACGCTGCGGCTGCGGCTGCTGACG CCGTCGGACTTCCTCAGCTTCGACACCGGTTTCGGCACCCCGGGCGGGCCCGTCCTGAAACTGACGATCACCGGCCTGAC CAGGATGGCCGGCGAGAACGCCCGGCAGATGCCGCTGGCCGTCAGCCCAGCGCTGGCAAGCCGGCTCGATCCCGTCTCCA CCGCGGTCATGCTGCGGCTCGAGCCCGGCCCGCGGACCGTCGCGGCCGTCAGCACGGCGCTGCGGCGGCTGGGAGACGGC CTGGCGCGCGACCCGCTGGCCGGGGAGTTCCCCGCGCTGCAGGTGTCCCGGCCGGCGACCGACGGCGACGCCCGCATCGC CGCGACCCAGCGCGTCCTCGTCACCGGGCTGGTCGTCTTCGCCGCCGTCGTCGGCGTCGCCGGCCTCGCCGCCGCCGGGC AGGCGTTCTACCGCCACCACGCGGCGAGCGCGCACGCCCAGCGCATCGAGGCGGTGCTCGGCCTGACCGGGCTGGGCCGC GCCGGCGCGCGGACGTTGGCGGCGCTGCCCGCCGCCGGGCTGGCGGGGGTGACCGCCGCCGCGGGCCCCCTCATCGCGGG CCTGCTGGAACCGCTCGGGCCGCTCGCCGGGGTGGAGCCCCACCCGGGCTACGCGCCGCACGTCGCGCTGGTGTGCGGCG CCGGAGCGGCGGGCCTGCTCATCACCCTCCTGCTCGCCGGCGGCACCGCGGCCCGAACCGGACGTCGCCCGGCAGACCCG GGACCCCTCGTGCCCCGTCTGGGCATGGCCGCCCTGGCTGCCGGGGCCTTCGGGCCGGCGGCCCGGTTCGGCTCGTCTGC CGTGTCACCCCTGCCGGCCGTGTCGTCCCTGTCACCGGTCGGCTCGGCGGCGGCACCGGCGGCGACGGGCCAGGGTGGTG CCGGATCCCCGCTGGCCCGCGGCGCGGCCTGCATGCGCGGCCCGGTCTGGCTGTGGATCGGAACCGCGTTCGCGCTCGGG CGCCGCCGGGACCACTCGCCGGCCACACGCCGGCCCGCCGTCGCGGGCGCAGCCATCGGGGTGACCGGGCTGGTCGCCGC CGCGACGATCGCCGCCGGCATGAACCGCCTGGTAGACGAGCCGCAGCGGTACGGATGGAACGCGGATCTGGAGATCACCG ACGCGCGCCCGGAGATCGTCAACCGGCTCGCGGCCGACCCCCGGGTCGCCGCCGTCAGCATGCTCGACGCCTCGACCGCG ACCATCGAGATCGACGCCGAGGGCCGGGCGTTGCGGGCGCCGGACCCCATACAGGGCGACGGCCCGGGCGACGCCGGCCC CGGGGCGATCGGGCGGGGGGACACCAGCCCCGGCGAGGACGTCGCCGTCTACTCCCTCGCGCCGAAGGCGACCACGCGCG CCGGCCCGGTGACGTCCACAGGGGCGGTGGGATGGACGATCTTCGATGGTGTGGCGCCGCGGGGCCTGAACGAGGTCGTC CTCGGCCCACGGGCCGCCCAGCGGTTCGACCTCGGGGTGGGCAGCACGGTGAGCGTGGCGGCGAACGACGGCGGGCACGC CGTGCTCACCGTCGTCGGCATCGGGGTCGGCCCCGTCCCCGGCGGGGAGCGGCTCGGCGAGAGCATGCTCGTCGAGCCGG CCACGCTCGCCCGGGTCCAGCAGACGCAGCCGCTGCGCAGCGCGCTCGTCCGCGCCGTCGACCCGGTGAACCCGGTGAAC CTCGCCGCCGCGCTGGGCACCGAGTACGAGCTGGACGTCGGCCGCCCGCCGACCGAGATCGCCAACCTGGGCGGCATCGG CCGGCTCCCGGCCCTGCTCCAGACCGTGCTCGCCGCGCTGGCCGTGGCCGCCGCGGGCCACGCCGCCGGAACCACCTGGC GGCGCCGCCACGGCGAGCTCGCGATCCTGCGCACCCTCGGCTTCACACCGTCCCAGACGGCCCGCATCCCGCTGACGACC TCGTGCGTGAGCGCGGCGCTGGCCGTCGCCGTCGGTATCCCGGCCGGCATGCTGATCGGACGTCTGGTCTGGTGGGAGAT CGCGACCGCGACCGGGGTGTCCGCCGACCTGGCGATACCCGTGCGGGTGCTCGCCGTGCTCCCGCCGGCCGCGATCGCCG TCGGCCTGCTCGTCGCCGCCCTGCCCGCCTGGCGCGCGTGGCGGCTGCTGCCGGGGGCCGTCCTGCGCGGGGAGTGA
Upstream 100 bases:
>100_bases TGGCGGACCGCATCGGCGCGATCGGCGGCACGCTGCGCTGGGAGTCGTCCCCCGGCTCCGGGACGGGCGTCATCGGCGTC GTGCCCGTGGGTGGCGGCTG
Downstream 100 bases:
>100_bases CCACCCCCCGCACGGGCCAGCCCCGGCTATCGGGGCGGATCGGACGGCGGCGTGCGCCGGCTCCAGATCTCGCGTAGGAC GCTCGGTGCCAGGTCCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 878; Mature: 877
Protein sequence:
>878_residues MAVLGAIGMIARSELRRRWAALIALGVLIGMVVAVVAGTAALVRRTATAHDRLERASSVADLQVSYFSDDPELARRVAAI PGVAQAWAGVGMVGRLEDQPSLAYIGIIGGPADHRGLYEPVVVRGHGYDPAAPDEAVLDERAAARWGVGVGDTLRLRLLT PSDFLSFDTGFGTPGGPVLKLTITGLTRMAGENARQMPLAVSPALASRLDPVSTAVMLRLEPGPRTVAAVSTALRRLGDG LARDPLAGEFPALQVSRPATDGDARIAATQRVLVTGLVVFAAVVGVAGLAAAGQAFYRHHAASAHAQRIEAVLGLTGLGR AGARTLAALPAAGLAGVTAAAGPLIAGLLEPLGPLAGVEPHPGYAPHVALVCGAGAAGLLITLLLAGGTAARTGRRPADP GPLVPRLGMAALAAGAFGPAARFGSSAVSPLPAVSSLSPVGSAAAPAATGQGGAGSPLARGAACMRGPVWLWIGTAFALG RRRDHSPATRRPAVAGAAIGVTGLVAAATIAAGMNRLVDEPQRYGWNADLEITDARPEIVNRLAADPRVAAVSMLDASTA TIEIDAEGRALRAPDPIQGDGPGDAGPGAIGRGDTSPGEDVAVYSLAPKATTRAGPVTSTGAVGWTIFDGVAPRGLNEVV LGPRAAQRFDLGVGSTVSVAANDGGHAVLTVVGIGVGPVPGGERLGESMLVEPATLARVQQTQPLRSALVRAVDPVNPVN LAAALGTEYELDVGRPPTEIANLGGIGRLPALLQTVLAALAVAAAGHAAGTTWRRRHGELAILRTLGFTPSQTARIPLTT SCVSAALAVAVGIPAGMLIGRLVWWEIATATGVSADLAIPVRVLAVLPPAAIAVGLLVAALPAWRAWRLLPGAVLRGE
Sequences:
>Translated_878_residues MAVLGAIGMIARSELRRRWAALIALGVLIGMVVAVVAGTAALVRRTATAHDRLERASSVADLQVSYFSDDPELARRVAAI PGVAQAWAGVGMVGRLEDQPSLAYIGIIGGPADHRGLYEPVVVRGHGYDPAAPDEAVLDERAAARWGVGVGDTLRLRLLT PSDFLSFDTGFGTPGGPVLKLTITGLTRMAGENARQMPLAVSPALASRLDPVSTAVMLRLEPGPRTVAAVSTALRRLGDG LARDPLAGEFPALQVSRPATDGDARIAATQRVLVTGLVVFAAVVGVAGLAAAGQAFYRHHAASAHAQRIEAVLGLTGLGR AGARTLAALPAAGLAGVTAAAGPLIAGLLEPLGPLAGVEPHPGYAPHVALVCGAGAAGLLITLLLAGGTAARTGRRPADP GPLVPRLGMAALAAGAFGPAARFGSSAVSPLPAVSSLSPVGSAAAPAATGQGGAGSPLARGAACMRGPVWLWIGTAFALG RRRDHSPATRRPAVAGAAIGVTGLVAAATIAAGMNRLVDEPQRYGWNADLEITDARPEIVNRLAADPRVAAVSMLDASTA TIEIDAEGRALRAPDPIQGDGPGDAGPGAIGRGDTSPGEDVAVYSLAPKATTRAGPVTSTGAVGWTIFDGVAPRGLNEVV LGPRAAQRFDLGVGSTVSVAANDGGHAVLTVVGIGVGPVPGGERLGESMLVEPATLARVQQTQPLRSALVRAVDPVNPVN LAAALGTEYELDVGRPPTEIANLGGIGRLPALLQTVLAALAVAAAGHAAGTTWRRRHGELAILRTLGFTPSQTARIPLTT SCVSAALAVAVGIPAGMLIGRLVWWEIATATGVSADLAIPVRVLAVLPPAAIAVGLLVAALPAWRAWRLLPGAVLRGE >Mature_877_residues AVLGAIGMIARSELRRRWAALIALGVLIGMVVAVVAGTAALVRRTATAHDRLERASSVADLQVSYFSDDPELARRVAAIP GVAQAWAGVGMVGRLEDQPSLAYIGIIGGPADHRGLYEPVVVRGHGYDPAAPDEAVLDERAAARWGVGVGDTLRLRLLTP SDFLSFDTGFGTPGGPVLKLTITGLTRMAGENARQMPLAVSPALASRLDPVSTAVMLRLEPGPRTVAAVSTALRRLGDGL ARDPLAGEFPALQVSRPATDGDARIAATQRVLVTGLVVFAAVVGVAGLAAAGQAFYRHHAASAHAQRIEAVLGLTGLGRA GARTLAALPAAGLAGVTAAAGPLIAGLLEPLGPLAGVEPHPGYAPHVALVCGAGAAGLLITLLLAGGTAARTGRRPADPG PLVPRLGMAALAAGAFGPAARFGSSAVSPLPAVSSLSPVGSAAAPAATGQGGAGSPLARGAACMRGPVWLWIGTAFALGR RRDHSPATRRPAVAGAAIGVTGLVAAATIAAGMNRLVDEPQRYGWNADLEITDARPEIVNRLAADPRVAAVSMLDASTAT IEIDAEGRALRAPDPIQGDGPGDAGPGAIGRGDTSPGEDVAVYSLAPKATTRAGPVTSTGAVGWTIFDGVAPRGLNEVVL GPRAAQRFDLGVGSTVSVAANDGGHAVLTVVGIGVGPVPGGERLGESMLVEPATLARVQQTQPLRSALVRAVDPVNPVNL AAALGTEYELDVGRPPTEIANLGGIGRLPALLQTVLAALAVAAAGHAAGTTWRRRHGELAILRTLGFTPSQTARIPLTTS CVSAALAVAVGIPAGMLIGRLVWWEIATATGVSADLAIPVRVLAVLPPAAIAVGLLVAALPAWRAWRLLPGAVLRGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88483; Mature: 88352
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLGAIGMIARSELRRRWAALIALGVLIGMVVAVVAGTAALVRRTATAHDRLERASSVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLQVSYFSDDPELARRVAAIPGVAQAWAGVGMVGRLEDQPSLAYIGIIGGPADHRGLYEP EEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCEEEEEEECCCCCCCCCCCC VVVRGHGYDPAAPDEAVLDERAAARWGVGVGDTLRLRLLTPSDFLSFDTGFGTPGGPVLK EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCEEE LTITGLTRMAGENARQMPLAVSPALASRLDPVSTAVMLRLEPGPRTVAAVSTALRRLGDG EEEHHHHHHHCCCCCCCCCEECHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC LARDPLAGEFPALQVSRPATDGDARIAATQRVLVTGLVVFAAVVGVAGLAAAGQAFYRHH CCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASAHAQRIEAVLGLTGLGRAGARTLAALPAAGLAGVTAAAGPLIAGLLEPLGPLAGVEP HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC HPGYAPHVALVCGAGAAGLLITLLLAGGTAARTGRRPADPGPLVPRLGMAALAAGAFGPA CCCCCCCEEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHH ARFGSSAVSPLPAVSSLSPVGSAAAPAATGQGGAGSPLARGAACMRGPVWLWIGTAFALG HHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHCCCEEEEHHHHHHHC RRRDHSPATRRPAVAGAAIGVTGLVAAATIAAGMNRLVDEPQRYGWNADLEITDARPEIV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCHHHH NRLAADPRVAAVSMLDASTATIEIDAEGRALRAPDPIQGDGPGDAGPGAIGRGDTSPGED HHHCCCCCCEEHEEECCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC VAVYSLAPKATTRAGPVTSTGAVGWTIFDGVAPRGLNEVVLGPRAAQRFDLGVGSTVSVA EEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCHHHHHCCCCCCEEEEE ANDGGHAVLTVVGIGVGPVPGGERLGESMLVEPATLARVQQTQPLRSALVRAVDPVNPVN ECCCCCEEEEEEECCCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH LAAALGTEYELDVGRPPTEIANLGGIGRLPALLQTVLAALAVAAAGHAAGTTWRRRHGEL HHHHHCCCEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCE AILRTLGFTPSQTARIPLTTSCVSAALAVAVGIPAGMLIGRLVWWEIATATGVSADLAIP EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHH VRVLAVLPPAAIAVGLLVAALPAWRAWRLLPGAVLRGE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AVLGAIGMIARSELRRRWAALIALGVLIGMVVAVVAGTAALVRRTATAHDRLERASSVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLQVSYFSDDPELARRVAAIPGVAQAWAGVGMVGRLEDQPSLAYIGIIGGPADHRGLYEP EEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCEEEEEEECCCCCCCCCCCC VVVRGHGYDPAAPDEAVLDERAAARWGVGVGDTLRLRLLTPSDFLSFDTGFGTPGGPVLK EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCEEE LTITGLTRMAGENARQMPLAVSPALASRLDPVSTAVMLRLEPGPRTVAAVSTALRRLGDG EEEHHHHHHHCCCCCCCCCEECHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC LARDPLAGEFPALQVSRPATDGDARIAATQRVLVTGLVVFAAVVGVAGLAAAGQAFYRHH CCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASAHAQRIEAVLGLTGLGRAGARTLAALPAAGLAGVTAAAGPLIAGLLEPLGPLAGVEP HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC HPGYAPHVALVCGAGAAGLLITLLLAGGTAARTGRRPADPGPLVPRLGMAALAAGAFGPA CCCCCCCEEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHH ARFGSSAVSPLPAVSSLSPVGSAAAPAATGQGGAGSPLARGAACMRGPVWLWIGTAFALG HHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHCCCEEEEHHHHHHHC RRRDHSPATRRPAVAGAAIGVTGLVAAATIAAGMNRLVDEPQRYGWNADLEITDARPEIV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCHHHH NRLAADPRVAAVSMLDASTATIEIDAEGRALRAPDPIQGDGPGDAGPGAIGRGDTSPGED HHHCCCCCCEEHEEECCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC VAVYSLAPKATTRAGPVTSTGAVGWTIFDGVAPRGLNEVVLGPRAAQRFDLGVGSTVSVA EEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCHHHHHCCCCCCEEEEE ANDGGHAVLTVVGIGVGPVPGGERLGESMLVEPATLARVQQTQPLRSALVRAVDPVNPVN ECCCCCEEEEEEECCCCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH LAAALGTEYELDVGRPPTEIANLGGIGRLPALLQTVLAALAVAAAGHAAGTTWRRRHGEL HHHHHCCCEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCE AILRTLGFTPSQTARIPLTTSCVSAALAVAVGIPAGMLIGRLVWWEIATATGVSADLAIP EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHH VRVLAVLPPAAIAVGLLVAALPAWRAWRLLPGAVLRGE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA