| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is estB [H]
Identifier: 158318206
GI number: 158318206
Start: 7866573
End: 7867244
Strand: Reverse
Name: estB [H]
Synonym: Franean1_6471
Alternate gene names: 158318206
Gene position: 7867244-7866573 (Counterclockwise)
Preceding gene: 158318207
Following gene: 158318205
Centisome position: 87.59
GC content: 65.62
Gene sequence:
>672_bases ATGTCCAGAGCGGCCAGGATCCTTGGCGCTCTCGCGGTCGCCGCCGCAGCTTTGCTGGGCACGTCGACCGCCGCCTCCGC GGCGACACATGAACCCGTCATCTTCGTCTACGGATTCAACGGATCGACATCCACCTGGACCGACATGGTCGCCGACTTCC AGGCCAACGGCTGGTCGTCGTCCGACCTGGTCGTGTTCACCTACGACTCGCACCAGTCGAACGTGACGACCGCGAACCAG CTGGCCGCCAGAATCTCCTCCGTGCGCAGCGCGACCGGCGCGGCCAAGGTGGACCTCGTCACCCACTCCATGGGCGCGCT GTCCTCGCGCTATTACCTCAAGAACCTCGGCGGGACGTCCGTCGTCGACGACTTCGTGTCGCTGGGTGGCCCGAACCACG GGACCAGCACCGCGACCCTGTGCGGATGGCTCTACACGGCCTGCTCGGAGATGAGCCCGGGATCGTCCTTCCTGAACACC CTGAACTCCGGTGACGAGACTCCGGGCGCGGTCAACTACGGTACGTGGTGGTCGTCCTGCGACGACACCATCAACCCGGA TTCCAGCGTCTCCCTCTCGGGTGCCACGAACACCGCCGCCGGTTGCCTCGGCCATTCCGAGCTGCACGACGACAACACCG TGGCCAGTCAGGTCAGAGCCTTCATCGGTTGA
Upstream 100 bases:
>100_bases CCGTGACGGCAACCGTTGGTGAACGTCCCACGGATTCAAAGGGAGCTCCCCGCGGGGATGCAAGGCTTGCTGCGCTGACC CCGCAACGACAGGAGTTCCC
Downstream 100 bases:
>100_bases GCTGGGCTGAGCCGGGCTCAGCCGCCGAGCGGGCGGCTAACGAGCGATCCTGGTCCGGTGTGTGCGAACGTCCCGGGAAC GGGTACGCCGAGGCGCACCA
Product: lipase class 2
Products: NA
Alternate protein names: Lipase B; Triacylglycerol lipase [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSRAARILGALAVAAAALLGTSTAASAATHEPVIFVYGFNGSTSTWTDMVADFQANGWSSSDLVVFTYDSHQSNVTTANQ LAARISSVRSATGAAKVDLVTHSMGALSSRYYLKNLGGTSVVDDFVSLGGPNHGTSTATLCGWLYTACSEMSPGSSFLNT LNSGDETPGAVNYGTWWSSCDDTINPDSSVSLSGATNTAAGCLGHSELHDDNTVASQVRAFIG
Sequences:
>Translated_223_residues MSRAARILGALAVAAAALLGTSTAASAATHEPVIFVYGFNGSTSTWTDMVADFQANGWSSSDLVVFTYDSHQSNVTTANQ LAARISSVRSATGAAKVDLVTHSMGALSSRYYLKNLGGTSVVDDFVSLGGPNHGTSTATLCGWLYTACSEMSPGSSFLNT LNSGDETPGAVNYGTWWSSCDDTINPDSSVSLSGATNTAAGCLGHSELHDDNTVASQVRAFIG >Mature_222_residues SRAARILGALAVAAAALLGTSTAASAATHEPVIFVYGFNGSTSTWTDMVADFQANGWSSSDLVVFTYDSHQSNVTTANQL AARISSVRSATGAAKVDLVTHSMGALSSRYYLKNLGGTSVVDDFVSLGGPNHGTSTATLCGWLYTACSEMSPGSSFLNTL NSGDETPGAVNYGTWWSSCDDTINPDSSVSLSGATNTAAGCLGHSELHDDNTVASQVRAFIG
Specific function: An esterase which preferentially hydrolyzes triacylglyceride substrates with short chain fatty acids (less than C10) with the maximum activity towards tricaprylin (C8:0). Active against p-nitrophenylesters with fatty acid chain lengths from C6 to C18 [H]
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002918 [H]
Pfam domain/function: PF01674 Lipase_2 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 22951; Mature: 22820
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAARILGALAVAAAALLGTSTAASAATHEPVIFVYGFNGSTSTWTDMVADFQANGWSS CCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC SDLVVFTYDSHQSNVTTANQLAARISSVRSATGAAKVDLVTHSMGALSSRYYLKNLGGTS CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHH VVDDFVSLGGPNHGTSTATLCGWLYTACSEMSPGSSFLNTLNSGDETPGAVNYGTWWSSC HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC DDTINPDSSVSLSGATNTAAGCLGHSELHDDNTVASQVRAFIG CCCCCCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SRAARILGALAVAAAALLGTSTAASAATHEPVIFVYGFNGSTSTWTDMVADFQANGWSS CHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC SDLVVFTYDSHQSNVTTANQLAARISSVRSATGAAKVDLVTHSMGALSSRYYLKNLGGTS CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHH VVDDFVSLGGPNHGTSTATLCGWLYTACSEMSPGSSFLNTLNSGDETPGAVNYGTWWSSC HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC DDTINPDSSVSLSGATNTAAGCLGHSELHDDNTVASQVRAFIG CCCCCCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8973323; 9384377 [H]