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The map label for this gene is frc [H]

Identifier: 158318095

GI number: 158318095

Start: 7720580

End: 7721821

Strand: Reverse

Name: frc [H]

Synonym: Franean1_6359

Alternate gene names: 158318095

Gene position: 7721821-7720580 (Counterclockwise)

Preceding gene: 158318096

Following gene: 158318094

Centisome position: 85.97

GC content: 68.68

Gene sequence:

>1242_bases
ATGAGCAAGCCGGACGGGCCGCTGACAGGCATACGCGTCATCGACTGGACGATCTGGCAGCACGGCCCGGTGGCCGGCGC
CATGCTCGGCGATCTCGGCGCGGACGTCATCAAGATCGAGGAGCGGCTCGGTGGCGATTCTGGCCGGGCCCAGTACGCCT
TCCCCGACACCGGCACCTCTCCGTACTTCGAGGTCAACAACCGCAACAAGCGCAGCCTCGCCGTCGACCTGAAACGACCC
GAGGGGGTGGCGCTGGTACGCCAGCTGGTTGCCCGTTCCGACGTGTTCATCCAGAATTTCCGGCCCACCGTCGCGGAGAA
ACTGGGACTGGACTACGAAACGCTGCGCGCCGACAACCCGATGCTCGTCTACGGCGCCGGCAGCGCCTACGGGCCCCACG
GCCCCGAGCGGACCGCCCGCGCCTACGACCTGCTTGGCCAGGCCCGCTCCGGCCTGATGCTCAGACCCGGCTCCGACCAG
GTCAACGTCGCCGACAGCGGCCTCGCCGACCAGATGGGCGCCATCATGCTCGCCTACGGCGTGCTCGCCGCCCTCCTCGC
GCGGGAACGCCACGGGGTGGGCCAGCGGGTCGACACCTCCCTGTTCGGCAGCATGCTCGCCCTGCGCGGCCTGGCGCTCG
CCCTCGAGCTCATGACCCAGGACGGACGTGTCGCCACCTCGACGTTCCGCAAGCACCTGGGCGACGAGCCACCCTCACGG
GAGAATCCGGGCAACCCGCTGTGGAACTACTACCAGTGCTCGGACGGCAAGCTGATCGCCATGGCCATGGTCCAGTCCGA
CCCGCACTGGGCGAACCTCCTCGACGCGCTCGGCAACCCCGAGCCGCTCGCCGGCGACCCCAGGTTCACCGACCACATCA
GCCGCTGCCAGAACGCCCGCGCCTGTGTCGCCCTCCTCGACGAGATCTTCGCGGCCGAACCCCGGGACATCTGGCTGCGC
CGGCTGCTCGCCACCGGCGACATGCCGATCACCGCGGTGAACACCACCGCCGACATCGTGAACGACCCCCAGGCGATCGC
CAACAACTACATCGTCTCATTCGACCACCCCGCGATGGGAAAGACCCGGGTCCCCGGTTTCCCGGTCGCCCTCTCCGAAA
CACCGGCGCGCATCCAGCGCCAGGCGCCCGAGTTCGGCGAGCACACCGAGGAGATCCTGATCAACGTGCTGGGACTGACC
TGGGACGACATCTCCGACCTGCGCGAACAGGAAATCCTCTAG

Upstream 100 bases:

>100_bases
CGGGCAACCCCAAGCACGCGATGCGGCTCGCTTCCACCTACCTGCCCACGATGCGCAAGATAGCCGACGAGTACCGCCGT
CAGGGCATCTGGAGCCGGGC

Downstream 100 bases:

>100_bases
TGGCGGGCCCGGTGACGGAATTCAGGGCGGGTACCCGCCTTCACAGCGTCACCTGCACGACCGAGGTGATCGTGACCAAG
GGAGGAAGCGGCGTTCTCAC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MSKPDGPLTGIRVIDWTIWQHGPVAGAMLGDLGADVIKIEERLGGDSGRAQYAFPDTGTSPYFEVNNRNKRSLAVDLKRP
EGVALVRQLVARSDVFIQNFRPTVAEKLGLDYETLRADNPMLVYGAGSAYGPHGPERTARAYDLLGQARSGLMLRPGSDQ
VNVADSGLADQMGAIMLAYGVLAALLARERHGVGQRVDTSLFGSMLALRGLALALELMTQDGRVATSTFRKHLGDEPPSR
ENPGNPLWNYYQCSDGKLIAMAMVQSDPHWANLLDALGNPEPLAGDPRFTDHISRCQNARACVALLDEIFAAEPRDIWLR
RLLATGDMPITAVNTTADIVNDPQAIANNYIVSFDHPAMGKTRVPGFPVALSETPARIQRQAPEFGEHTEEILINVLGLT
WDDISDLREQEIL

Sequences:

>Translated_413_residues
MSKPDGPLTGIRVIDWTIWQHGPVAGAMLGDLGADVIKIEERLGGDSGRAQYAFPDTGTSPYFEVNNRNKRSLAVDLKRP
EGVALVRQLVARSDVFIQNFRPTVAEKLGLDYETLRADNPMLVYGAGSAYGPHGPERTARAYDLLGQARSGLMLRPGSDQ
VNVADSGLADQMGAIMLAYGVLAALLARERHGVGQRVDTSLFGSMLALRGLALALELMTQDGRVATSTFRKHLGDEPPSR
ENPGNPLWNYYQCSDGKLIAMAMVQSDPHWANLLDALGNPEPLAGDPRFTDHISRCQNARACVALLDEIFAAEPRDIWLR
RLLATGDMPITAVNTTADIVNDPQAIANNYIVSFDHPAMGKTRVPGFPVALSETPARIQRQAPEFGEHTEEILINVLGLT
WDDISDLREQEIL
>Mature_412_residues
SKPDGPLTGIRVIDWTIWQHGPVAGAMLGDLGADVIKIEERLGGDSGRAQYAFPDTGTSPYFEVNNRNKRSLAVDLKRPE
GVALVRQLVARSDVFIQNFRPTVAEKLGLDYETLRADNPMLVYGAGSAYGPHGPERTARAYDLLGQARSGLMLRPGSDQV
NVADSGLADQMGAIMLAYGVLAALLARERHGVGQRVDTSLFGSMLALRGLALALELMTQDGRVATSTFRKHLGDEPPSRE
NPGNPLWNYYQCSDGKLIAMAMVQSDPHWANLLDALGNPEPLAGDPRFTDHISRCQNARACVALLDEIFAAEPRDIWLRR
LLATGDMPITAVNTTADIVNDPQAIANNYIVSFDHPAMGKTRVPGFPVALSETPARIQRQAPEFGEHTEEILINVLGLTW
DDISDLREQEIL

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=400, Percent_Identity=31, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI300863124, Length=426, Percent_Identity=29.1079812206573, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI13376042, Length=426, Percent_Identity=26.2910798122066, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI42794625, Length=421, Percent_Identity=26.8408551068884, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI266456254, Length=421, Percent_Identity=26.8408551068884, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI300863126, Length=148, Percent_Identity=41.2162162162162, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI266458397, Length=273, Percent_Identity=30.03663003663, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI266458393, Length=273, Percent_Identity=30.03663003663, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI266458395, Length=144, Percent_Identity=35.4166666666667, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI42822893, Length=144, Percent_Identity=35.4166666666667, Blast_Score=75, Evalue=8e-14,
Organism=Escherichia coli, GI87082093, Length=395, Percent_Identity=30.8860759493671, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1788717, Length=428, Percent_Identity=29.2056074766355, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1786222, Length=420, Percent_Identity=25.2380952380952, Blast_Score=97, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI32564160, Length=283, Percent_Identity=28.2685512367491, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI115535051, Length=321, Percent_Identity=25.5451713395639, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24648431, Length=414, Percent_Identity=30.4347826086957, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24585488, Length=198, Percent_Identity=36.3636363636364, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 45059; Mature: 44927

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPDGPLTGIRVIDWTIWQHGPVAGAMLGDLGADVIKIEERLGGDSGRAQYAFPDTGTS
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEECCCCCCC
PYFEVNNRNKRSLAVDLKRPEGVALVRQLVARSDVFIQNFRPTVAEKLGLDYETLRADNP
CEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCC
MLVYGAGSAYGPHGPERTARAYDLLGQARSGLMLRPGSDQVNVADSGLADQMGAIMLAYG
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCEECCCCCHHHHHHHHHHHHH
VLAALLARERHGVGQRVDTSLFGSMLALRGLALALELMTQDGRVATSTFRKHLGDEPPSR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
ENPGNPLWNYYQCSDGKLIAMAMVQSDPHWANLLDALGNPEPLAGDPRFTDHISRCQNAR
CCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHH
ACVALLDEIFAAEPRDIWLRRLLATGDMPITAVNTTADIVNDPQAIANNYIVSFDHPAMG
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCHHHHCCCCHHHHCCEEEEECCCCCC
KTRVPGFPVALSETPARIQRQAPEFGEHTEEILINVLGLTWDDISDLREQEIL
CCCCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SKPDGPLTGIRVIDWTIWQHGPVAGAMLGDLGADVIKIEERLGGDSGRAQYAFPDTGTS
CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEECCCCCCC
PYFEVNNRNKRSLAVDLKRPEGVALVRQLVARSDVFIQNFRPTVAEKLGLDYETLRADNP
CEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCC
MLVYGAGSAYGPHGPERTARAYDLLGQARSGLMLRPGSDQVNVADSGLADQMGAIMLAYG
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCEECCCCCHHHHHHHHHHHHH
VLAALLARERHGVGQRVDTSLFGSMLALRGLALALELMTQDGRVATSTFRKHLGDEPPSR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
ENPGNPLWNYYQCSDGKLIAMAMVQSDPHWANLLDALGNPEPLAGDPRFTDHISRCQNAR
CCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHH
ACVALLDEIFAAEPRDIWLRRLLATGDMPITAVNTTADIVNDPQAIANNYIVSFDHPAMG
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCHHHHCCCCHHHHCCEEEEECCCCCC
KTRVPGFPVALSETPARIQRQAPEFGEHTEEILINVLGLTWDDISDLREQEIL
CCCCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]