Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is ytoA [H]

Identifier: 158318096

GI number: 158318096

Start: 7721818

End: 7722342

Strand: Reverse

Name: ytoA [H]

Synonym: Franean1_6360

Alternate gene names: 158318096

Gene position: 7722342-7721818 (Counterclockwise)

Preceding gene: 158318098

Following gene: 158318095

Centisome position: 85.98

GC content: 64.57

Gene sequence:

>525_bases
GTGATCATCATACCGTTCAACGGAAAGAGCCCGAAGGTGGCGGCGTCCGCGCTCGTTGCCGACAACGTCACCCTCATCGG
CGACGTCGAGATCGGCGAGGAGTGCTCGATCTGGCCCGGTGTGGTCATCCGGTCGGACACCACCCCGATCAGGATCGGCA
ACAACGTCCACATCGAGGAGAACTCGGTGCTGCACACCAGCACGCACATCGAGGACAACGTGATGATCGGGCACAACTGC
ACGATCGAGGCCTTCGTCGGCCACGACTGCATGATCGGGAACACGGCGGCGCTGATGCCGCTGTCGCGGGTAGGTGCCCA
CTGTGCCATCGCCGCCGGGTCCGTCGTGCTGGAGCAGGTGGAGATCCCCGAGTACTGCTTCGCGGTGGGTGCTCCCGCGA
AGGTCCACTCGAAGATCGACCCGGGCAACCCCAAGCACGCGATGCGGCTCGCTTCCACCTACCTGCCCACGATGCGCAAG
ATAGCCGACGAGTACCGCCGTCAGGGCATCTGGAGCCGGGCATGA

Upstream 100 bases:

>100_bases
CAAGAGAGCGCGGGAAGGTGTCGCTTTCCGTGGCGCTCCCGGGTACTTGCGTCGCCCCGATCCGGGGATTTCGAACTTCG
GCCTCGACAGAGGAGCTCCA

Downstream 100 bases:

>100_bases
GCAAGCCGGACGGGCCGCTGACAGGCATACGCGTCATCGACTGGACGATCTGGCAGCACGGCCCGGTGGCCGGCGCCATG
CTCGGCGATCTCGGCGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEENSVLHTSTHIEDNVMIGHNC
TIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQVEIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRK
IADEYRRQGIWSRA

Sequences:

>Translated_174_residues
MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEENSVLHTSTHIEDNVMIGHNC
TIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQVEIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRK
IADEYRRQGIWSRA
>Mature_174_residues
MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEENSVLHTSTHIEDNVMIGHNC
TIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQVEIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRK
IADEYRRQGIWSRA

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=184, Percent_Identity=27.7173913043478, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18751; Mature: 18751

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEE
CEEECCCCCCCCHHHHEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCEEECCEEEECC
NSVLHTSTHIEDNVMIGHNCTIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQV
CCEEEEECCCCCCEEECCCCEEEEEECCCEEECCCHHHCCHHHHCCEEEEECCHHEEECC
EIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRKIADEYRRQGIWSRA
CCCHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEE
CEEECCCCCCCCHHHHEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCEEECCEEEECC
NSVLHTSTHIEDNVMIGHNCTIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQV
CCEEEEECCCCCCEEECCCCEEEEEECCCEEECCCHHHCCHHHHCCEEEEECCHHEEECC
EIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRKIADEYRRQGIWSRA
CCCHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]