| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is nolO [H]
Identifier: 158318066
GI number: 158318066
Start: 7682969
End: 7684624
Strand: Direct
Name: nolO [H]
Synonym: Franean1_6326
Alternate gene names: 158318066
Gene position: 7682969-7684624 (Clockwise)
Preceding gene: 158318065
Following gene: 158318067
Centisome position: 85.54
GC content: 68.9
Gene sequence:
>1656_bases GTGACCGTTGACGACCGGTACATCATCGGTTTCTCCGACTCGGTGCACGATCGGGCCGTCTGCCTCTTTCGGGGCACCGA GCCGGTCGTCGCGATCGAGGAGGAGCGGCTGACCCGGCAGCGTTACGCCCTGGATTTCGAGGGCCTCGACCGCTGGGACG CCGGCGTGTACACCGAGCTGGATCTGGACGGCGGAACCAGCGAGTTCCACGAGCGACGCATCCGCCGCCTGGTCGACTAC TGCCTCTCGGCCGCGGGCATCTCCGAGTCCGACGTGTCGCTGTGGGTCGGAAGCTCCCTGCACACCGCGTTTCCGCTGCT GGACCGGGCGGTATTCCTGAACCACCATCTGGCCCACGCCGCGTCCGCCTTCTTCGGTTCGGGGGCGGAGGACGCAGCCG TCCTGGTGGTGGACGGCTACGGGGACAGCGTCTCCGGTGACGCCTTCGAGACGATGACGACCTACCGGGCCTCGGGTACC ACCATCGACGTCGTGGAGCGGGTCTCCGGGGTGAAGGACGGCGTCCACCTGGGGAACTCCGCCGGTATCTTCTACCGGAT CGGGACGCTGCTGTCCGGGTTCAGCGTGGTCGACGAGGGCAAGGCGATGGGGCTCGCGGGCCATGGCCGTCCCCGCTATC TTCCGCACATCATGGAGCACATTCGATTCGGTGCGGACAAGGTCGAGATCCGGAACGAGTCGATCTGGCAGGCGTTGCAG GGTCTCCGGTCGGACGCCATCGAGGACCGCGCGGACATGGCGGCGAGCTTCCAGGCCGCGCTGGAGCAGATCGTGGTGTT CTACGCGCGTCGCGCCCACGAACTGACCGGGTGCCGGACGTTGTGCATGGCGGGTGGGGTCGCGCTGAACTGCGTCGCGA ACCAGAAGGTGCTCGACACCGCGGGATTCTCGACGGTCGCGGTGTTCCCGGCCGCGGCCGACAACGGGATCGCGATGGGC GCCGCGTACTACGGCGCGCACGTCCTGTATGGCGGCGGTCCGGCGCACGGCCTGGTCACCCCCTGCCTTGGCCGGGCCTA CCGGAGAGACGAGACGCTGGCCGCGTTGGGCGCCGTCGGCGGTATCGCCACCGTGACGGAGATCGGCCTGCGGGCGTGTG CGGAACGCGCCGCGGGCCACCTCGCCGCCGGCGAGCTGGTCATGTGGTTCCAGGAGGGGTCGGAAATAGGCCCGCGAGCC CTGGGGCACCGTAGTATTTTCGGCGATCCTCGTTCGGTCGCCACCCGGGAGCGCATCAACGCCGCGGTGAAGTCGCGCGA GGCGTTCCGTCCGCTGGCTCCGATGGTGCTGGAGAAGGAGGCCGGCGACTGGTTCGACTGCGGCCGCTCCCCCTACATGC TGTTCACGCCGACCGCGCTTCCCCGTACCCGGGAGCTGGCGCCGGCCATTGTGCACGCCGACGGCTCCGCCCGCGTGCAG ACTCTCGCCGACGCGGACAACCCGGCGGTGCACGAGCTGCTGCTGGAGTTCCAGCGGCTCACCGGTGTGCCGATGGTCAT CAACACCTCGTTCAACCTGCGCGGGGAGCCGATCGTGGAGACTCCCATGGACGCGGTGCGGGCCTTCGCGGAATCGCCGG TCAGCATGCTGTGCATCGACGGCTTCCTGGTCGATAAGCGCGTCGACGCCGAATGA
Upstream 100 bases:
>100_bases GCAGCCTTGCGGATCCGAACCTCGACTACTCCTGGGCCAACGGGGCGGCCGTGCGCGGACGGCCGTTGTCGCTGATCATG GAAGCGAAGGTGGTGCGGCA
Downstream 100 bases:
>100_bases TCAGCCGACGTGGGGTGGGGCGGTCGGGGCTGCGGTTCAGCTCGCTGAGCCTCGGCGGTATGACCTTCGGCAGCAACGAG GCGTTCGGCGCCATCGGGTC
Product: carbamoyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MTVDDRYIIGFSDSVHDRAVCLFRGTEPVVAIEEERLTRQRYALDFEGLDRWDAGVYTELDLDGGTSEFHERRIRRLVDY CLSAAGISESDVSLWVGSSLHTAFPLLDRAVFLNHHLAHAASAFFGSGAEDAAVLVVDGYGDSVSGDAFETMTTYRASGT TIDVVERVSGVKDGVHLGNSAGIFYRIGTLLSGFSVVDEGKAMGLAGHGRPRYLPHIMEHIRFGADKVEIRNESIWQALQ GLRSDAIEDRADMAASFQAALEQIVVFYARRAHELTGCRTLCMAGGVALNCVANQKVLDTAGFSTVAVFPAAADNGIAMG AAYYGAHVLYGGGPAHGLVTPCLGRAYRRDETLAALGAVGGIATVTEIGLRACAERAAGHLAAGELVMWFQEGSEIGPRA LGHRSIFGDPRSVATRERINAAVKSREAFRPLAPMVLEKEAGDWFDCGRSPYMLFTPTALPRTRELAPAIVHADGSARVQ TLADADNPAVHELLLEFQRLTGVPMVINTSFNLRGEPIVETPMDAVRAFAESPVSMLCIDGFLVDKRVDAE
Sequences:
>Translated_551_residues MTVDDRYIIGFSDSVHDRAVCLFRGTEPVVAIEEERLTRQRYALDFEGLDRWDAGVYTELDLDGGTSEFHERRIRRLVDY CLSAAGISESDVSLWVGSSLHTAFPLLDRAVFLNHHLAHAASAFFGSGAEDAAVLVVDGYGDSVSGDAFETMTTYRASGT TIDVVERVSGVKDGVHLGNSAGIFYRIGTLLSGFSVVDEGKAMGLAGHGRPRYLPHIMEHIRFGADKVEIRNESIWQALQ GLRSDAIEDRADMAASFQAALEQIVVFYARRAHELTGCRTLCMAGGVALNCVANQKVLDTAGFSTVAVFPAAADNGIAMG AAYYGAHVLYGGGPAHGLVTPCLGRAYRRDETLAALGAVGGIATVTEIGLRACAERAAGHLAAGELVMWFQEGSEIGPRA LGHRSIFGDPRSVATRERINAAVKSREAFRPLAPMVLEKEAGDWFDCGRSPYMLFTPTALPRTRELAPAIVHADGSARVQ TLADADNPAVHELLLEFQRLTGVPMVINTSFNLRGEPIVETPMDAVRAFAESPVSMLCIDGFLVDKRVDAE >Mature_550_residues TVDDRYIIGFSDSVHDRAVCLFRGTEPVVAIEEERLTRQRYALDFEGLDRWDAGVYTELDLDGGTSEFHERRIRRLVDYC LSAAGISESDVSLWVGSSLHTAFPLLDRAVFLNHHLAHAASAFFGSGAEDAAVLVVDGYGDSVSGDAFETMTTYRASGTT IDVVERVSGVKDGVHLGNSAGIFYRIGTLLSGFSVVDEGKAMGLAGHGRPRYLPHIMEHIRFGADKVEIRNESIWQALQG LRSDAIEDRADMAASFQAALEQIVVFYARRAHELTGCRTLCMAGGVALNCVANQKVLDTAGFSTVAVFPAAADNGIAMGA AYYGAHVLYGGGPAHGLVTPCLGRAYRRDETLAALGAVGGIATVTEIGLRACAERAAGHLAAGELVMWFQEGSEIGPRAL GHRSIFGDPRSVATRERINAAVKSREAFRPLAPMVLEKEAGDWFDCGRSPYMLFTPTALPRTRELAPAIVHADGSARVQT LADADNPAVHELLLEFQRLTGVPMVINTSFNLRGEPIVETPMDAVRAFAESPVSMLCIDGFLVDKRVDAE
Specific function: Involved in the O-carbamoylation of nod factors [H]
COG id: COG2192
COG function: function code O; Predicted carbamoyl transferase, NodU family
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 59396; Mature: 59265
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDDRYIIGFSDSVHDRAVCLFRGTEPVVAIEEERLTRQRYALDFEGLDRWDAGVYTEL CCCCCEEEEECCCCCCCCEEEEEECCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEE DLDGGTSEFHERRIRRLVDYCLSAAGISESDVSLWVGSSLHTAFPLLDRAVFLNHHLAHA ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH ASAFFGSGAEDAAVLVVDGYGDSVSGDAFETMTTYRASGTTIDVVERVSGVKDGVHLGNS HHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC AGIFYRIGTLLSGFSVVDEGKAMGLAGHGRPRYLPHIMEHIRFGADKVEIRNESIWQALQ CCHHHHHHHHHCCCCEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHH GLRSDAIEDRADMAASFQAALEQIVVFYARRAHELTGCRTLCMAGGVALNCVANQKVLDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHC AGFSTVAVFPAAADNGIAMGAAYYGAHVLYGGGPAHGLVTPCLGRAYRRDETLAALGAVG CCCCEEEEEECCCCCCEEEEHHHHCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHC GIATVTEIGLRACAERAAGHLAAGELVMWFQEGSEIGPRALGHRSIFGDPRSVATRERIN HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHH AAVKSREAFRPLAPMVLEKEAGDWFDCGRSPYMLFTPTALPRTRELAPAIVHADGSARVQ HHHHHHHHHCCHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCHHCCCEEEECCCCCEEE TLADADNPAVHELLLEFQRLTGVPMVINTSFNLRGEPIVETPMDAVRAFAESPVSMLCID EECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEC GFLVDKRVDAE CEEECCCCCCC >Mature Secondary Structure TVDDRYIIGFSDSVHDRAVCLFRGTEPVVAIEEERLTRQRYALDFEGLDRWDAGVYTEL CCCCEEEEECCCCCCCCEEEEEECCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEE DLDGGTSEFHERRIRRLVDYCLSAAGISESDVSLWVGSSLHTAFPLLDRAVFLNHHLAHA ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH ASAFFGSGAEDAAVLVVDGYGDSVSGDAFETMTTYRASGTTIDVVERVSGVKDGVHLGNS HHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC AGIFYRIGTLLSGFSVVDEGKAMGLAGHGRPRYLPHIMEHIRFGADKVEIRNESIWQALQ CCHHHHHHHHHCCCCEECCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHH GLRSDAIEDRADMAASFQAALEQIVVFYARRAHELTGCRTLCMAGGVALNCVANQKVLDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHC AGFSTVAVFPAAADNGIAMGAAYYGAHVLYGGGPAHGLVTPCLGRAYRRDETLAALGAVG CCCCEEEEEECCCCCCEEEEHHHHCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHC GIATVTEIGLRACAERAAGHLAAGELVMWFQEGSEIGPRALGHRSIFGDPRSVATRERIN HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHH AAVKSREAFRPLAPMVLEKEAGDWFDCGRSPYMLFTPTALPRTRELAPAIVHADGSARVQ HHHHHHHHHCCHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCHHCCCEEEECCCCCEEE TLADADNPAVHELLLEFQRLTGVPMVINTSFNLRGEPIVETPMDAVRAFAESPVSMLCID EECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEC GFLVDKRVDAE CEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]