| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yajO [H]
Identifier: 158318067
GI number: 158318067
Start: 7684621
End: 7685643
Strand: Direct
Name: yajO [H]
Synonym: Franean1_6327
Alternate gene names: 158318067
Gene position: 7684621-7685643 (Clockwise)
Preceding gene: 158318066
Following gene: 158318068
Centisome position: 85.56
GC content: 71.07
Gene sequence:
>1023_bases ATGATCAGCCGACGTGGGGTGGGGCGGTCGGGGCTGCGGTTCAGCTCGCTGAGCCTCGGCGGTATGACCTTCGGCAGCAA CGAGGCGTTCGGCGCCATCGGGTCGGATCCGACCGAGGCGGCCCGCGTCGTCGCGCTCGCTCTGGACGCTGGCATCGACA CGTTCGACACCGCCAACGTCTACGGCGAGAGCGAGCAGCTGCTCGGACGGCTGCTCCGGCGGCGGCGTGACGATGTCGTG ATCTGCACGAAGGCGCGGTTCCCGACCTCCGGACACGTCGGTGACGGACTGCCGCCCTCGAGCAGCTACGGCCTGTCGCG CGCGGCGGTCGTCCGGTCCGTCGAGGCGTCGCTGCGGCGCCTCGACACCGATCGCATCGACGTCCTCTGGCTGCACATGC AGGACAGGTCCGTCCCAATCGAGGAGACTCTGTCCGCCACCGACCTGCTGGTCCGCCAGGGCAAGGTGCGTTATCTCGGG TTGTCGAACTTCATGGCGTACCGGGTGGCCGAGGCTGTCCTCACCGCGCGGGCGCGGGCACTGGAACCACCGGTGGCCCT GCAGGTGCCCTGGTCGGCGGTGAGCCGGGACGTCGAGCGGGAGCTCGTCCCGGCGGCCCGTCACCTCGGGCTCGGGGTGG CCGTCTACAGCCCGCTGGCCCGCGGTTTCCTCAGCGGCAAGTACGACCGAGGCGCAGAGCCGGTGGTGGGCAGCCGGCTG GGGGAGTGGCGCGACGAGTTCGCCCGCTACGACTCCGACCGCAACTGGGCCGTCCTGGCCGCGCTGCGGGAGACAGCGCG CGCGCATCAGGTGCCGGTGAGCGCGGTCTCCCTCGCCTGGCTGCTGGCCCGGCGTCCGGTGGTCAGCGTCGTGATCGGGG CACGCACCGAGGAGCAGCTACGGGAGAACCTGATGGCGGCGGACGTGCGGCTCACCGCCGAGGAGATCGCGCGACTGGAC AAGGTGTCGGAACCTGACTGGGGCTATCCGGAGTCCTTCATCGCGCGCTTCGAGCCGTGGTGA
Upstream 100 bases:
>100_bases TCGTGGAGACTCCCATGGACGCGGTGCGGGCCTTCGCGGAATCGCCGGTCAGCATGCTGTGCATCGACGGCTTCCTGGTC GATAAGCGCGTCGACGCCGA
Downstream 100 bases:
>100_bases CCCGTCGTATGCCCACGTTCCACCAGAGGGAGCACTCCTTGTCCGCCCGGGAGACCGCTCCGGGGGCGCTGGCCCTGTGG CTGGCGGAGATGGAGTATCC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MISRRGVGRSGLRFSSLSLGGMTFGSNEAFGAIGSDPTEAARVVALALDAGIDTFDTANVYGESEQLLGRLLRRRRDDVV ICTKARFPTSGHVGDGLPPSSSYGLSRAAVVRSVEASLRRLDTDRIDVLWLHMQDRSVPIEETLSATDLLVRQGKVRYLG LSNFMAYRVAEAVLTARARALEPPVALQVPWSAVSRDVERELVPAARHLGLGVAVYSPLARGFLSGKYDRGAEPVVGSRL GEWRDEFARYDSDRNWAVLAALRETARAHQVPVSAVSLAWLLARRPVVSVVIGARTEEQLRENLMAADVRLTAEEIARLD KVSEPDWGYPESFIARFEPW
Sequences:
>Translated_340_residues MISRRGVGRSGLRFSSLSLGGMTFGSNEAFGAIGSDPTEAARVVALALDAGIDTFDTANVYGESEQLLGRLLRRRRDDVV ICTKARFPTSGHVGDGLPPSSSYGLSRAAVVRSVEASLRRLDTDRIDVLWLHMQDRSVPIEETLSATDLLVRQGKVRYLG LSNFMAYRVAEAVLTARARALEPPVALQVPWSAVSRDVERELVPAARHLGLGVAVYSPLARGFLSGKYDRGAEPVVGSRL GEWRDEFARYDSDRNWAVLAALRETARAHQVPVSAVSLAWLLARRPVVSVVIGARTEEQLRENLMAADVRLTAEEIARLD KVSEPDWGYPESFIARFEPW >Mature_340_residues MISRRGVGRSGLRFSSLSLGGMTFGSNEAFGAIGSDPTEAARVVALALDAGIDTFDTANVYGESEQLLGRLLRRRRDDVV ICTKARFPTSGHVGDGLPPSSSYGLSRAAVVRSVEASLRRLDTDRIDVLWLHMQDRSVPIEETLSATDLLVRQGKVRYLG LSNFMAYRVAEAVLTARARALEPPVALQVPWSAVSRDVERELVPAARHLGLGVAVYSPLARGFLSGKYDRGAEPVVGSRL GEWRDEFARYDSDRNWAVLAALRETARAHQVPVSAVSLAWLLARRPVVSVVIGARTEEQLRENLMAADVRLTAEEIARLD KVSEPDWGYPESFIARFEPW
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=330, Percent_Identity=33.6363636363636, Blast_Score=156, Evalue=2e-38, Organism=Homo sapiens, GI4504825, Length=330, Percent_Identity=33.6363636363636, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI27436962, Length=333, Percent_Identity=31.2312312312312, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI27436964, Length=330, Percent_Identity=31.5151515151515, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI27436966, Length=331, Percent_Identity=31.4199395770393, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI27436971, Length=331, Percent_Identity=32.6283987915408, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI223718702, Length=292, Percent_Identity=35.6164383561644, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI41152114, Length=291, Percent_Identity=35.0515463917526, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI41327764, Length=280, Percent_Identity=31.7857142857143, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI223718708, Length=158, Percent_Identity=37.9746835443038, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI87081735, Length=326, Percent_Identity=38.0368098159509, Blast_Score=180, Evalue=1e-46, Organism=Escherichia coli, GI1789375, Length=332, Percent_Identity=31.0240963855422, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI1789199, Length=352, Percent_Identity=27.8409090909091, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788070, Length=328, Percent_Identity=28.3536585365854, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1788081, Length=295, Percent_Identity=28.4745762711864, Blast_Score=85, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6323998, Length=332, Percent_Identity=31.3253012048193, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6325169, Length=348, Percent_Identity=29.0229885057471, Blast_Score=140, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6319958, Length=305, Percent_Identity=30.4918032786885, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6322615, Length=266, Percent_Identity=32.3308270676692, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6319951, Length=340, Percent_Identity=29.1176470588235, Blast_Score=121, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6321052, Length=152, Percent_Identity=32.8947368421053, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24640980, Length=349, Percent_Identity=26.3610315186246, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI45549126, Length=349, Percent_Identity=26.9340974212034, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24646155, Length=323, Percent_Identity=27.8637770897833, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24646159, Length=232, Percent_Identity=28.8793103448276, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37357; Mature: 37357
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRRGVGRSGLRFSSLSLGGMTFGSNEAFGAIGSDPTEAARVVALALDAGIDTFDTANV CCCCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH YGESEQLLGRLLRRRRDDVVICTKARFPTSGHVGDGLPPSSSYGLSRAAVVRSVEASLRR CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDTDRIDVLWLHMQDRSVPIEETLSATDLLVRQGKVRYLGLSNFMAYRVAEAVLTARARA CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHH LEPPVALQVPWSAVSRDVERELVPAARHLGLGVAVYSPLARGFLSGKYDRGAEPVVGSRL CCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH GEWRDEFARYDSDRNWAVLAALRETARAHQVPVSAVSLAWLLARRPVVSVVIGARTEEQL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHEEEECCCCHHHH RENLMAADVRLTAEEIARLDKVSEPDWGYPESFIARFEPW HHHHHHHHHEECHHHHHHHHCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure MISRRGVGRSGLRFSSLSLGGMTFGSNEAFGAIGSDPTEAARVVALALDAGIDTFDTANV CCCCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH YGESEQLLGRLLRRRRDDVVICTKARFPTSGHVGDGLPPSSSYGLSRAAVVRSVEASLRR CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDTDRIDVLWLHMQDRSVPIEETLSATDLLVRQGKVRYLGLSNFMAYRVAEAVLTARARA CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHH LEPPVALQVPWSAVSRDVERELVPAARHLGLGVAVYSPLARGFLSGKYDRGAEPVVGSRL CCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH GEWRDEFARYDSDRNWAVLAALRETARAHQVPVSAVSLAWLLARRPVVSVVIGARTEEQL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHEEEECCCCHHHH RENLMAADVRLTAEEIARLDKVSEPDWGYPESFIARFEPW HHHHHHHHHEECHHHHHHHHCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]