| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318065
Identifier: 158318065
GI number: 158318065
Start: 7681761
End: 7682972
Strand: Direct
Name: 158318065
Synonym: Franean1_6325
Alternate gene names: NA
Gene position: 7681761-7682972 (Clockwise)
Preceding gene: 158318064
Following gene: 158318066
Centisome position: 85.52
GC content: 70.96
Gene sequence:
>1212_bases GTGCCCCCGACGGACCCGTGGCATGGGGGATCTGACCATGAGCGACCCGGTGCCGCGGGGACGCACGTGGGTGACGGTTC TCTTTTCCGGCGGAGCCCTGACGTCGCGGTCATCGGCGTGGGGCCGGGCCATACGATCCTACGACTGACCCAGCGGAACC AGGCCGCTGCCATCCGTTCGCCGTCGATCTGGACGCTCGACCTCCTCGCGCATTTCGGGCAACCTCGGACGCCGTCGTCC TGGCTGACACGCTGGCCGGCGGAACAGCAGAACGCGGCGACGGGGGTGTTCGCCCGTGCGCTGACGCGGGGGCTGCTGGT CACGGCAGACCCCGGCACCGGCACCGGCGACAGCGACAGCGACAGCGACAGCGACGACACGGACGACGGCACCGACGAGA TGGTGCGAACCCTGTTCGTGGAGCTCGACCGCCTGCGCTCGCAGCTGCGTTCGGCGGACGGCCCTGTCCTCTCGGAGCTG CTCGGAAGCGACCAGGCCCTTCCCCGGCTGGTTCTGCACACCTCCCATCTCCTGGTCAGGGACGTGGCGGACCGGCTGGA GGCCGGAACGCGGGCGCGGCTACGGAGGCGCGCGAGCGAGATCGTGCCGTCGGGTGTGCCGCTGCGGCTGCATCTCGGCT GTGGGCCGCACCGGCTGCCCGGGTGGGTGAACGTCGACCTGCGTGATCCCGCCGCGGATCTTCGGTTGGATGTCCGCGCC GGACTGCCCTTCGACGACGGGGCCGTGACCGCGGTCTACCTGGCCCACATTCTGGAGCATGTCGAATACCCGGACGAGGC CCTGCGGGTGCTGCGGGAGTGCTGGCGAGCCCTGGGCGACGGCGGGCTGCTGCGGGTGGCTGTTCCCGATCTGCGTTCCT TCCTCGATGCCTACGCCGCGGGCGACGACGGTTTCTTCGAGTACTTCGAGCGGCGGTGGGAACGCGTGCCCGCACCGACC CCGCTCGCGTCGTTTCTGCACCACGCGGGGGCCGGGGAGTTCCCGTGGGTGGCCGACCGGCACAGGTTCGGCTACGACGA GCGGACCCTCGGGGAGCTCCTGCGGGAGGCCGGGTTCACCGACGTCCGGCGTTGCTCTGCCGGCGACAGCAGCCTTGCGG ATCCGAACCTCGACTACTCCTGGGCCAACGGGGCGGCCGTGCGCGGACGGCCGTTGTCGCTGATCATGGAAGCGAAGGTG GTGCGGCAGTGA
Upstream 100 bases:
>100_bases ACAACCCTCGGGGCAGCGGAACAGCGACGGATCCAAGGTGATCTGGAGTCCTTCATCGCCGTGCAGCGGAGTTGCTACCA GGAGATGAAGGAGTTCTACA
Downstream 100 bases:
>100_bases CCGTTGACGACCGGTACATCATCGGTTTCTCCGACTCGGTGCACGATCGGGCCGTCTGCCTCTTTCGGGGCACCGAGCCG GTCGTCGCGATCGAGGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MPPTDPWHGGSDHERPGAAGTHVGDGSLFRRSPDVAVIGVGPGHTILRLTQRNQAAAIRSPSIWTLDLLAHFGQPRTPSS WLTRWPAEQQNAATGVFARALTRGLLVTADPGTGTGDSDSDSDSDDTDDGTDEMVRTLFVELDRLRSQLRSADGPVLSEL LGSDQALPRLVLHTSHLLVRDVADRLEAGTRARLRRRASEIVPSGVPLRLHLGCGPHRLPGWVNVDLRDPAADLRLDVRA GLPFDDGAVTAVYLAHILEHVEYPDEALRVLRECWRALGDGGLLRVAVPDLRSFLDAYAAGDDGFFEYFERRWERVPAPT PLASFLHHAGAGEFPWVADRHRFGYDERTLGELLREAGFTDVRRCSAGDSSLADPNLDYSWANGAAVRGRPLSLIMEAKV VRQ
Sequences:
>Translated_403_residues MPPTDPWHGGSDHERPGAAGTHVGDGSLFRRSPDVAVIGVGPGHTILRLTQRNQAAAIRSPSIWTLDLLAHFGQPRTPSS WLTRWPAEQQNAATGVFARALTRGLLVTADPGTGTGDSDSDSDSDDTDDGTDEMVRTLFVELDRLRSQLRSADGPVLSEL LGSDQALPRLVLHTSHLLVRDVADRLEAGTRARLRRRASEIVPSGVPLRLHLGCGPHRLPGWVNVDLRDPAADLRLDVRA GLPFDDGAVTAVYLAHILEHVEYPDEALRVLRECWRALGDGGLLRVAVPDLRSFLDAYAAGDDGFFEYFERRWERVPAPT PLASFLHHAGAGEFPWVADRHRFGYDERTLGELLREAGFTDVRRCSAGDSSLADPNLDYSWANGAAVRGRPLSLIMEAKV VRQ >Mature_402_residues PPTDPWHGGSDHERPGAAGTHVGDGSLFRRSPDVAVIGVGPGHTILRLTQRNQAAAIRSPSIWTLDLLAHFGQPRTPSSW LTRWPAEQQNAATGVFARALTRGLLVTADPGTGTGDSDSDSDSDDTDDGTDEMVRTLFVELDRLRSQLRSADGPVLSELL GSDQALPRLVLHTSHLLVRDVADRLEAGTRARLRRRASEIVPSGVPLRLHLGCGPHRLPGWVNVDLRDPAADLRLDVRAG LPFDDGAVTAVYLAHILEHVEYPDEALRVLRECWRALGDGGLLRVAVPDLRSFLDAYAAGDDGFFEYFERRWERVPAPTP LASFLHHAGAGEFPWVADRHRFGYDERTLGELLREAGFTDVRRCSAGDSSLADPNLDYSWANGAAVRGRPLSLIMEAKVV RQ
Specific function: Unknown
COG id: COG4627
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44104; Mature: 43973
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTDPWHGGSDHERPGAAGTHVGDGSLFRRSPDVAVIGVGPGHTILRLTQRNQAAAIRS CCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCEEEEECCCCCEEEEEECCCCHHHCCC PSIWTLDLLAHFGQPRTPSSWLTRWPAEQQNAATGVFARALTRGLLVTADPGTGTGDSDS CCCHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC DSDSDDTDDGTDEMVRTLFVELDRLRSQLRSADGPVLSELLGSDQALPRLVLHTSHLLVR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH DVADRLEAGTRARLRRRASEIVPSGVPLRLHLGCGPHRLPGWVNVDLRDPAADLRLDVRA HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEC GLPFDDGAVTAVYLAHILEHVEYPDEALRVLRECWRALGDGGLLRVAVPDLRSFLDAYAA CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHC GDDGFFEYFERRWERVPAPTPLASFLHHAGAGEFPWVADRHRFGYDERTLGELLREAGFT CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCH DVRRCSAGDSSLADPNLDYSWANGAAVRGRPLSLIMEAKVVRQ HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure PPTDPWHGGSDHERPGAAGTHVGDGSLFRRSPDVAVIGVGPGHTILRLTQRNQAAAIRS CCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCEEEEECCCCCEEEEEECCCCHHHCCC PSIWTLDLLAHFGQPRTPSSWLTRWPAEQQNAATGVFARALTRGLLVTADPGTGTGDSDS CCCHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC DSDSDDTDDGTDEMVRTLFVELDRLRSQLRSADGPVLSELLGSDQALPRLVLHTSHLLVR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH DVADRLEAGTRARLRRRASEIVPSGVPLRLHLGCGPHRLPGWVNVDLRDPAADLRLDVRA HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEC GLPFDDGAVTAVYLAHILEHVEYPDEALRVLRECWRALGDGGLLRVAVPDLRSFLDAYAA CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHC GDDGFFEYFERRWERVPAPTPLASFLHHAGAGEFPWVADRHRFGYDERTLGELLREAGFT CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCH DVRRCSAGDSSLADPNLDYSWANGAAVRGRPLSLIMEAKVVRQ HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA