| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is hsaB [H]
Identifier: 158317981
GI number: 158317981
Start: 7578618
End: 7579130
Strand: Direct
Name: hsaB [H]
Synonym: Franean1_6241
Alternate gene names: 158317981
Gene position: 7578618-7579130 (Clockwise)
Preceding gene: 158317980
Following gene: 158317982
Centisome position: 84.38
GC content: 68.62
Gene sequence:
>513_bases ATGAGCGGCACACGGCCCCCGAACCACACCGACGACCACACGAACGCCTTCCGGAACGCGCTTGGAACGTTCGCGACGGG AATCGTGGTCGTCACCGCGTCGCACCCGGCGGACGGTCCCGTGGGTCTCACGGCCAACTCGTTCAGCTCGGTGTCGCTCG CTCCTCCGCTCGTGCTGTTCTGCGTGGCGCACACCTCCACCACGTGGCCGTCTATCCGGGCCGTGGGCCGGTTCTGCGTG AACGTCCTCGCCGACGGCCAGGAGGAACTGTCACGCCGGTTCACCGTGCGGGGTGAGGATCGCTTCCGCGGCGTCCCCTG GCGGCCCGCGCCGTCCGGCGCCCCGATCCTGCCCGGCGTCGCGTCATGGATCGACTGCCGCATCGAGACTCTCCACGAGG CCGGCGACCACACCATCGTCGTCGGGAAGGTCTGCGATCTCGCGGTCGACGACAAGGGTGCTGCTCCGCTCCTCTACTAC CGAAGCAGCTACGCCAGCCTGACCGTCAGATAA
Upstream 100 bases:
>100_bases ACGAGTCACTCCTGGCCGACGGCGTCCACCCCGGCGACGACGGCCACGCGGTCATGGCCGACCGCCTGGAACCCGTCCTG CGGAAGGCGGGGCCGGGGAC
Downstream 100 bases:
>100_bases CCATTGATGGTCACGAATCGAACTGGAAGGAGCGTTCTGATGGACGGCGACACCGACCGGAACGGCGAAGAGGAGAGACC TCGGCAGTTCTTCTTCGACG
Product: flavin reductase domain-containing protein
Products: NAD(+); reduced flavin [C]
Alternate protein names: Flavin:NADH reductase [H]
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSGTRPPNHTDDHTNAFRNALGTFATGIVVVTASHPADGPVGLTANSFSSVSLAPPLVLFCVAHTSTTWPSIRAVGRFCV NVLADGQEELSRRFTVRGEDRFRGVPWRPAPSGAPILPGVASWIDCRIETLHEAGDHTIVVGKVCDLAVDDKGAAPLLYY RSSYASLTVR
Sequences:
>Translated_170_residues MSGTRPPNHTDDHTNAFRNALGTFATGIVVVTASHPADGPVGLTANSFSSVSLAPPLVLFCVAHTSTTWPSIRAVGRFCV NVLADGQEELSRRFTVRGEDRFRGVPWRPAPSGAPILPGVASWIDCRIETLHEAGDHTIVVGKVCDLAVDDKGAAPLLYY RSSYASLTVR >Mature_169_residues SGTRPPNHTDDHTNAFRNALGTFATGIVVVTASHPADGPVGLTANSFSSVSLAPPLVLFCVAHTSTTWPSIRAVGRFCVN VLADGQEELSRRFTVRGEDRFRGVPWRPAPSGAPILPGVASWIDCRIETLHEAGDHTIVVGKVCDLAVDDKGAAPLLYYR SSYASLTVR
Specific function: Catalyzes the reduction of free flavins (FMN or FAD) by NADH. Subsequently, the reduced flavins diffuse to the HsaA oxygenase subunit [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the non-flavoprotein flavin reductase family [H]
Homologues:
Organism=Escherichia coli, GI87081819, Length=164, Percent_Identity=31.0975609756098, Blast_Score=77, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 18155; Mature: 18023
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTRPPNHTDDHTNAFRNALGTFATGIVVVTASHPADGPVGLTANSFSSVSLAPPLVLF CCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEE CVAHTSTTWPSIRAVGRFCVNVLADGQEELSRRFTVRGEDRFRGVPWRPAPSGAPILPGV EECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHEEECCCCHHCCCCCCCCCCCCCCCCCHH ASWIDCRIETLHEAGDHTIVVGKVCDLAVDDKGAAPLLYYRSSYASLTVR HHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure SGTRPPNHTDDHTNAFRNALGTFATGIVVVTASHPADGPVGLTANSFSSVSLAPPLVLF CCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEE CVAHTSTTWPSIRAVGRFCVNVLADGQEELSRRFTVRGEDRFRGVPWRPAPSGAPILPGV EECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHEEECCCCHHCCCCCCCCCCCCCCCCCHH ASWIDCRIETLHEAGDHTIVVGKVCDLAVDDKGAAPLLYYRSSYASLTVR HHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]