Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317980

Identifier: 158317980

GI number: 158317980

Start: 7577632

End: 7578621

Strand: Direct

Name: 158317980

Synonym: Franean1_6240

Alternate gene names: NA

Gene position: 7577632-7578621 (Clockwise)

Preceding gene: 158317974

Following gene: 158317981

Centisome position: 84.36

GC content: 73.54

Gene sequence:

>990_bases
ATGCCGCCGCTTGATCCACGCCCATTTCTCCGGGGCAGCCCGTTCGCCGGTACGCCGGAGATCCCCTACCTGCGCGCGGT
TACCGCGGACGCGCCGCGCCTGCCGGGCGGAACCTGGCAGGCGGCCTCCATTCCGGTCGGAGTCCGGCTCGAGTTACAGG
GCGACGCCGAGGCGGTGGTCGTCGCGTATCGCACCGAGTGCGACGCCCGCGGCCCACGCGGCCCCGGCATCGGCCAGACC
TTCGAGATGTGGGTGGGCGACACACTGCTGGCGACCGCGCCGGCCGTCCACGGCGAGGGCACCGTGGAGCTGCCCCTGGA
CGCCGGCACGCGGACGACGACCGTTTACCTGCCCGAACGCATGCGCCCGACCGTGCTCTCACTCGCCCCGGTCGGCGGTT
CCCTCGAACCGGGACCGCCCCGTCCGCGTTGGCTCGCCTACGGTGACTCCATCGTCGAGGGCTGGGTCGCCAGCTCGGCG
GGCTCGTCCTGGCCCGCACGGCTGGGCCGCCGGCTGGGCCTCGACGTCTGCAACCTCGGCTACGCCGGCGCCGCCCGCGG
CGAGATCCCCTCCGCCGAACACCTGGCGAGCGTCCCGGCGGCACTGATCAGCATCAGCTACGGCACCAACTGCTGGTCGA
CGATCCCGCACACCGCCGAACTGCTGCGCGCCGGGCTGGACGTCTTCCTCACCGTGGTGCGGCAGGGGCACCCGGACACG
CCGATCGTGGTCACCACGCCGATCCGCCGCCCGGACGCCGAGACCACCCCCAACCGCGTCGGCGCCACGCTCGACGATCT
ACGGGTCGCGATGGCGTCCCTCGTCCAGGCACGCATCGACGGCGGCGACCCGTCGCTCACCCTCGTTCACGGCGAGACCC
TGCTGGACGAGTCACTCCTGGCCGACGGCGTCCACCCCGGCGACGACGGCCACGCGGTCATGGCCGACCGCCTGGAACCC
GTCCTGCGGAAGGCGGGGCCGGGGACATGA

Upstream 100 bases:

>100_bases
TACGTTCCTGAACGCAAGATGGCTGTTCCATATACGGAACAATGCGGCGGTCTCGAAGCGTCAGACATCCGGGCCGCGCA
ACGGTGAATGCGAGGTCGTC

Downstream 100 bases:

>100_bases
GCGGCACACGGCCCCCGAACCACACCGACGACCACACGAACGCCTTCCGGAACGCGCTTGGAACGTTCGCGACGGGAATC
GTGGTCGTCACCGCGTCGCA

Product: GDSL family lipase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPPLDPRPFLRGSPFAGTPEIPYLRAVTADAPRLPGGTWQAASIPVGVRLELQGDAEAVVVAYRTECDARGPRGPGIGQT
FEMWVGDTLLATAPAVHGEGTVELPLDAGTRTTTVYLPERMRPTVLSLAPVGGSLEPGPPRPRWLAYGDSIVEGWVASSA
GSSWPARLGRRLGLDVCNLGYAGAARGEIPSAEHLASVPAALISISYGTNCWSTIPHTAELLRAGLDVFLTVVRQGHPDT
PIVVTTPIRRPDAETTPNRVGATLDDLRVAMASLVQARIDGGDPSLTLVHGETLLDESLLADGVHPGDDGHAVMADRLEP
VLRKAGPGT

Sequences:

>Translated_329_residues
MPPLDPRPFLRGSPFAGTPEIPYLRAVTADAPRLPGGTWQAASIPVGVRLELQGDAEAVVVAYRTECDARGPRGPGIGQT
FEMWVGDTLLATAPAVHGEGTVELPLDAGTRTTTVYLPERMRPTVLSLAPVGGSLEPGPPRPRWLAYGDSIVEGWVASSA
GSSWPARLGRRLGLDVCNLGYAGAARGEIPSAEHLASVPAALISISYGTNCWSTIPHTAELLRAGLDVFLTVVRQGHPDT
PIVVTTPIRRPDAETTPNRVGATLDDLRVAMASLVQARIDGGDPSLTLVHGETLLDESLLADGVHPGDDGHAVMADRLEP
VLRKAGPGT
>Mature_328_residues
PPLDPRPFLRGSPFAGTPEIPYLRAVTADAPRLPGGTWQAASIPVGVRLELQGDAEAVVVAYRTECDARGPRGPGIGQTF
EMWVGDTLLATAPAVHGEGTVELPLDAGTRTTTVYLPERMRPTVLSLAPVGGSLEPGPPRPRWLAYGDSIVEGWVASSAG
SSWPARLGRRLGLDVCNLGYAGAARGEIPSAEHLASVPAALISISYGTNCWSTIPHTAELLRAGLDVFLTVVRQGHPDTP
IVVTTPIRRPDAETTPNRVGATLDDLRVAMASLVQARIDGGDPSLTLVHGETLLDESLLADGVHPGDDGHAVMADRLEPV
LRKAGPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34544; Mature: 34412

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLDPRPFLRGSPFAGTPEIPYLRAVTADAPRLPGGTWQAASIPVGVRLELQGDAEAVV
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCEEEEEEECCCCCEEE
VAYRTECDARGPRGPGIGQTFEMWVGDTLLATAPAVHGEGTVELPLDAGTRTTTVYLPER
EEEECCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCEEEECCCCCEEEEEEECCC
MRPTVLSLAPVGGSLEPGPPRPRWLAYGDSIVEGWVASSAGSSWPARLGRRLGLDVCNLG
CCCCEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCC
YAGAARGEIPSAEHLASVPAALISISYGTNCWSTIPHTAELLRAGLDVFLTVVRQGHPDT
CCCCCCCCCCCHHHHHHHHHHHEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
PIVVTTPIRRPDAETTPNRVGATLDDLRVAMASLVQARIDGGDPSLTLVHGETLLDESLL
CEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH
ADGVHPGDDGHAVMADRLEPVLRKAGPGT
HCCCCCCCCCCEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PPLDPRPFLRGSPFAGTPEIPYLRAVTADAPRLPGGTWQAASIPVGVRLELQGDAEAVV
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCEEEEEEECCCCCEEE
VAYRTECDARGPRGPGIGQTFEMWVGDTLLATAPAVHGEGTVELPLDAGTRTTTVYLPER
EEEECCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCEEEECCCCCEEEEEEECCC
MRPTVLSLAPVGGSLEPGPPRPRWLAYGDSIVEGWVASSAGSSWPARLGRRLGLDVCNLG
CCCCEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCC
YAGAARGEIPSAEHLASVPAALISISYGTNCWSTIPHTAELLRAGLDVFLTVVRQGHPDT
CCCCCCCCCCCHHHHHHHHHHHEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
PIVVTTPIRRPDAETTPNRVGATLDDLRVAMASLVQARIDGGDPSLTLVHGETLLDESLL
CEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH
ADGVHPGDDGHAVMADRLEPVLRKAGPGT
HCCCCCCCCCCEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA