| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317982
Identifier: 158317982
GI number: 158317982
Start: 7579170
End: 7579592
Strand: Direct
Name: 158317982
Synonym: Franean1_6242
Alternate gene names: NA
Gene position: 7579170-7579592 (Clockwise)
Preceding gene: 158317981
Following gene: 158317983
Centisome position: 84.38
GC content: 64.3
Gene sequence:
>423_bases ATGGACGGCGACACCGACCGGAACGGCGAAGAGGAGAGACCTCGGCAGTTCTTCTTCGACGTCAACGAGATCCCGGGCCG TACCAACGTGGATATCATGGGGGATTCCGAGGAAACCCGACAGTACTTGGACCTGTTCGGCCGCGACCTGGTTACCAGGA CGATTCTCCAGTCCCCGCAACTGTGCGTCTACCATGAGACCGCCGCGCCAGGCGAGAAGGTCAAGCCCCATCGCCACGGT ACCCATCAGCTGAACTACGTCCTCCGCGGCGAGCTGATCTTCGGCAGGCGGCGCGTGGGAGCCGGCATGGGCTTCTTCAC GCCCGACCTTCTCTACGCCTGGCGGGCCGGTGACGAGGGCGCCGAGTGGATCGAGGTCCACGCCGGCCAGCCCGGCATTT TCGTCGATCAACGGCCGTTCTGA
Upstream 100 bases:
>100_bases CAAGGGTGCTGCTCCGCTCCTCTACTACCGAAGCAGCTACGCCAGCCTGACCGTCAGATAACCATTGATGGTCACGAATC GAACTGGAAGGAGCGTTCTG
Downstream 100 bases:
>100_bases CCGCTGCCCTGACCCAGCGCCCTGTGGCCATCTACCAAACGAGGGATGTCAGTCGTGACAGATTTATTCGAGGGCAAGGT CGCCCTCATCACCGGCGCCG
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MDGDTDRNGEEERPRQFFFDVNEIPGRTNVDIMGDSEETRQYLDLFGRDLVTRTILQSPQLCVYHETAAPGEKVKPHRHG THQLNYVLRGELIFGRRRVGAGMGFFTPDLLYAWRAGDEGAEWIEVHAGQPGIFVDQRPF
Sequences:
>Translated_140_residues MDGDTDRNGEEERPRQFFFDVNEIPGRTNVDIMGDSEETRQYLDLFGRDLVTRTILQSPQLCVYHETAAPGEKVKPHRHG THQLNYVLRGELIFGRRRVGAGMGFFTPDLLYAWRAGDEGAEWIEVHAGQPGIFVDQRPF >Mature_140_residues MDGDTDRNGEEERPRQFFFDVNEIPGRTNVDIMGDSEETRQYLDLFGRDLVTRTILQSPQLCVYHETAAPGEKVKPHRHG THQLNYVLRGELIFGRRRVGAGMGFFTPDLLYAWRAGDEGAEWIEVHAGQPGIFVDQRPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16035; Mature: 16035
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGDTDRNGEEERPRQFFFDVNEIPGRTNVDIMGDSEETRQYLDLFGRDLVTRTILQSPQ CCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC LCVYHETAAPGEKVKPHRHGTHQLNYVLRGELIFGRRRVGAGMGFFTPDLLYAWRAGDEG EEEEECCCCCCCCCCCCCCCCCEEEEEEECEEEECCHHHCCCCCCCCHHHEEEECCCCCC AEWIEVHAGQPGIFVDQRPF CCEEEEECCCCCEEECCCCC >Mature Secondary Structure MDGDTDRNGEEERPRQFFFDVNEIPGRTNVDIMGDSEETRQYLDLFGRDLVTRTILQSPQ CCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC LCVYHETAAPGEKVKPHRHGTHQLNYVLRGELIFGRRRVGAGMGFFTPDLLYAWRAGDEG EEEEECCCCCCCCCCCCCCCCCEEEEEEECEEEECCHHHCCCCCCCCHHHEEEECCCCCC AEWIEVHAGQPGIFVDQRPF CCEEEEECCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA