Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317967

Identifier: 158317967

GI number: 158317967

Start: 7564121

End: 7565518

Strand: Reverse

Name: 158317967

Synonym: Franean1_6227

Alternate gene names: NA

Gene position: 7565518-7564121 (Counterclockwise)

Preceding gene: 158317968

Following gene: 158317964

Centisome position: 84.23

GC content: 72.17

Gene sequence:

>1398_bases
GTGAAACGAGACAGTCTGTTGGGTCCGGGGAACGGGACACCGCGGGATGACTTTCCGGTTCGCGTGCGCGACCTGCTGCG
CCAACGCGCGGTGTGGGTGCTGCCGCTGGTCCTGGCCTCGGTCGTCGTCGCGTCGATGACCGCGCTGTACCTCGCGTCGG
CGGTGAACCCGCTGGCTCATGTGCGCGGCCTGCCGGTCGAGGTGGTGAACAGCGACCGCGGGGCCACGCTGGGAACAGAA
CACCTCGACATCGGCAGGCGGATCGAGACCGGCCTGCGGGCGAGCCCCGCGGTGTCCGGCCGGCTGCGGCTGGAGCCGGT
GACCCGGTCCGAGGCCGAACGAGCCATGAACCGCGGGCGCGCGTACGCGACCGTCGTGATCCCGCCCGACTTCACCGCCT
CGCTCCTGACACAGGCCGGTCTGCCGCCAGCCGGCTCGTCGGCAGCCGGTCCGCCGTCGGCCGGGACAGCGGGTGCCGGG
GCGATCCAGCTGCTGACCAACCCGCGGGCCGGCACGCTGGGGGTGAGCCTGGCCACCGGCATCCTGCAGCCCGCTGTCGC
CACCGCCTCGCGGACGATCAGCGGCCAGCTCACGGCGGTGGCCGGCGCGGGGCCCCACGACGCCGCGACGAAGGCGTTCC
TGGCGAACCCGGTGACGGTCACGACCAGCCAGTTCCACCCCCCGCCCGAGAACAGCGCGCTTGGCCTGAGCGCCTTCTAC
CTGGCCCTGCTGACCCTCATGTGCGGGTTCCTGGCCGGGACCATCCTGCACGCCACGGTGGACGCGGCACTCGGCTACGG
GACCTCCGAGGTCGGCCCCCGGTGGACCCAGCTCCAGCCGAAGGCGATCAGCCGGTGGCGGACCCTGCTGATCAAATGGG
CGATGGCGGCGGTGCTGACCGCGGTGGTGACTGGTCTGATGCTCGCGGTGGCGGCCGGCGCGGTGGGCATGGACGCTCCG
CATCCGCTGCTGTTGTGGCTGTACGCGTGGCTGTGCTCGGCCAGCGTCGCCGCCGGGACGATCGTGCTCTTCGCGGCGCT
CGGTACCCCCGGGCAGCTGGTCGCCATCCTGCTGTTCGTCTACGCCGGTCTGGCCTCGGCTGGCGGGACCGTCCCCGTGG
AGGCACTACCCGACTTCTTCCGGCTGCTCAGTGAGGCTGAGCCGCTGCGGCAGATCCTCGCTGGCGACCGGGCAATCCTG
TACTTCGGCGCCCAGGCTGACGCGGGCCTGACCCGTGGCGTCGTGGCGGCCGCGATCGGCCTGCTCTGCTGGCTCGTCGC
GGGCACTCTGATCGTCCGCTGGTATGACCGCCGGGCGATGCACCGGTTGACTCCGGAGCTGCTGGCGTACGTCGATCGCG
CCGTCCAGGACTACCGGGCCCAGGAACGGGCCGAATGA

Upstream 100 bases:

>100_bases
GTCAAGTCGGTGCCCGCCTGACCTGATGCGATGTCCGCGTGCCCCGTGGCGGGCCGGCGGCCATTGGCGGTCCACAAACT
GCGCGGCCCACGGGGCCTGA

Downstream 100 bases:

>100_bases
GAGCACGCGGCCCGTCGTGGTCGCCCTCAGCACCAGCCTGGTGCCGGACCAGAAGGCTTGGGCGGGCCCCGCTACGGCAG
GATCCGGCGGATCACGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MKRDSLLGPGNGTPRDDFPVRVRDLLRQRAVWVLPLVLASVVVASMTALYLASAVNPLAHVRGLPVEVVNSDRGATLGTE
HLDIGRRIETGLRASPAVSGRLRLEPVTRSEAERAMNRGRAYATVVIPPDFTASLLTQAGLPPAGSSAAGPPSAGTAGAG
AIQLLTNPRAGTLGVSLATGILQPAVATASRTISGQLTAVAGAGPHDAATKAFLANPVTVTTSQFHPPPENSALGLSAFY
LALLTLMCGFLAGTILHATVDAALGYGTSEVGPRWTQLQPKAISRWRTLLIKWAMAAVLTAVVTGLMLAVAAGAVGMDAP
HPLLLWLYAWLCSASVAAGTIVLFAALGTPGQLVAILLFVYAGLASAGGTVPVEALPDFFRLLSEAEPLRQILAGDRAIL
YFGAQADAGLTRGVVAAAIGLLCWLVAGTLIVRWYDRRAMHRLTPELLAYVDRAVQDYRAQERAE

Sequences:

>Translated_465_residues
MKRDSLLGPGNGTPRDDFPVRVRDLLRQRAVWVLPLVLASVVVASMTALYLASAVNPLAHVRGLPVEVVNSDRGATLGTE
HLDIGRRIETGLRASPAVSGRLRLEPVTRSEAERAMNRGRAYATVVIPPDFTASLLTQAGLPPAGSSAAGPPSAGTAGAG
AIQLLTNPRAGTLGVSLATGILQPAVATASRTISGQLTAVAGAGPHDAATKAFLANPVTVTTSQFHPPPENSALGLSAFY
LALLTLMCGFLAGTILHATVDAALGYGTSEVGPRWTQLQPKAISRWRTLLIKWAMAAVLTAVVTGLMLAVAAGAVGMDAP
HPLLLWLYAWLCSASVAAGTIVLFAALGTPGQLVAILLFVYAGLASAGGTVPVEALPDFFRLLSEAEPLRQILAGDRAIL
YFGAQADAGLTRGVVAAAIGLLCWLVAGTLIVRWYDRRAMHRLTPELLAYVDRAVQDYRAQERAE
>Mature_465_residues
MKRDSLLGPGNGTPRDDFPVRVRDLLRQRAVWVLPLVLASVVVASMTALYLASAVNPLAHVRGLPVEVVNSDRGATLGTE
HLDIGRRIETGLRASPAVSGRLRLEPVTRSEAERAMNRGRAYATVVIPPDFTASLLTQAGLPPAGSSAAGPPSAGTAGAG
AIQLLTNPRAGTLGVSLATGILQPAVATASRTISGQLTAVAGAGPHDAATKAFLANPVTVTTSQFHPPPENSALGLSAFY
LALLTLMCGFLAGTILHATVDAALGYGTSEVGPRWTQLQPKAISRWRTLLIKWAMAAVLTAVVTGLMLAVAAGAVGMDAP
HPLLLWLYAWLCSASVAAGTIVLFAALGTPGQLVAILLFVYAGLASAGGTVPVEALPDFFRLLSEAEPLRQILAGDRAIL
YFGAQADAGLTRGVVAAAIGLLCWLVAGTLIVRWYDRRAMHRLTPELLAYVDRAVQDYRAQERAE

Specific function: Unknown

COG id: COG1511

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48527; Mature: 48527

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDSLLGPGNGTPRDDFPVRVRDLLRQRAVWVLPLVLASVVVASMTALYLASAVNPLAH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VRGLPVEVVNSDRGATLGTEHLDIGRRIETGLRASPAVSGRLRLEPVTRSEAERAMNRGR
HCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCC
AYATVVIPPDFTASLLTQAGLPPAGSSAAGPPSAGTAGAGAIQLLTNPRAGTLGVSLATG
EEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
ILQPAVATASRTISGQLTAVAGAGPHDAATKAFLANPVTVTTSQFHPPPENSALGLSAFY
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHH
LALLTLMCGFLAGTILHATVDAALGYGTSEVGPRWTQLQPKAISRWRTLLIKWAMAAVLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AVVTGLMLAVAAGAVGMDAPHPLLLWLYAWLCSASVAAGTIVLFAALGTPGQLVAILLFV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YAGLASAGGTVPVEALPDFFRLLSEAEPLRQILAGDRAILYFGAQADAGLTRGVVAAAIG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
LLCWLVAGTLIVRWYDRRAMHRLTPELLAYVDRAVQDYRAQERAE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRDSLLGPGNGTPRDDFPVRVRDLLRQRAVWVLPLVLASVVVASMTALYLASAVNPLAH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VRGLPVEVVNSDRGATLGTEHLDIGRRIETGLRASPAVSGRLRLEPVTRSEAERAMNRGR
HCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCC
AYATVVIPPDFTASLLTQAGLPPAGSSAAGPPSAGTAGAGAIQLLTNPRAGTLGVSLATG
EEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
ILQPAVATASRTISGQLTAVAGAGPHDAATKAFLANPVTVTTSQFHPPPENSALGLSAFY
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHH
LALLTLMCGFLAGTILHATVDAALGYGTSEVGPRWTQLQPKAISRWRTLLIKWAMAAVLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AVVTGLMLAVAAGAVGMDAPHPLLLWLYAWLCSASVAAGTIVLFAALGTPGQLVAILLFV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YAGLASAGGTVPVEALPDFFRLLSEAEPLRQILAGDRAILYFGAQADAGLTRGVVAAAIG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
LLCWLVAGTLIVRWYDRRAMHRLTPELLAYVDRAVQDYRAQERAE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA