| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317968
Identifier: 158317968
GI number: 158317968
Start: 7565598
End: 7566296
Strand: Reverse
Name: 158317968
Synonym: Franean1_6228
Alternate gene names: NA
Gene position: 7566296-7565598 (Counterclockwise)
Preceding gene: 158317969
Following gene: 158317967
Centisome position: 84.24
GC content: 70.24
Gene sequence:
>699_bases ATGTCGCAGCCCACTGTCGTCCTCGTCCACGGCGCCTTCGCCGACGCGTCCAGCTTCGCCAGGGTGGTTCCCGAGCTGCT CGCCGACGGCCTCGCGGTGGTGGCACCGGCGATCCCGAACCGCTCGCTCGTCGGCGACGCCGAGTACCTTGGGCCGGTCC TCGCGGCGATCGACGGTCCCGTCGTCCTCGTCGGCCACTCGTACGGCTGCGCGGTGGCCACCGTGGCCGGTGTCGCCGAG AACGTGAAGGCCCTGGTCTATCTCGCCGGCTTCGTCCTCGAGGAGGGCGAGGCCCTGGGCGAGCTCCAGGGTCGGTTCCC CGACTCCGACCTGGGCTCAGCGCTGGTCACCACACCGTTCCCGGGCGGCGTAGATCTCTCGGTCGATATTCAGAAGTTCC CGGCGGTCTTTGCCCACGACGTCGACCCGGCCGTCACCGCGGTGCTCGCCGTGTCGCAGCGGCCGTTGTCCGCGGCGGTG TTCGGCGAGAAGGCACCCGCCGCGGCGTGGCGGACCAGGCCGACATGGGGCATCGTCGCCACGTCGGATCACGCCATCAA CCCGGAGGTCCAGCGCTTCGGCTACCAGCGCGCGGGGGTCGAAACGGTGGAGGTGGACTCGTCGCACCTGGTGATGTTCT CCCAGCCGACCGTGGTAGCCGATCTGATCAGGACGGTCGTCAAGTCGGTGCCCGCCTGA
Upstream 100 bases:
>100_bases GGAGCGGTTCAGTCGCCCGGTACGGAGACGCTACACAAATCGTCAAGTACGCCCTGGTGTACTCGGGCCGCGTAACTTCG ACCAGGGGAGATGGAAAAGC
Downstream 100 bases:
>100_bases CCTGATGCGATGTCCGCGTGCCCCGTGGCGGGCCGGCGGCCATTGGCGGTCCACAAACTGCGCGGCCCACGGGGCCTGAG TGAAACGAGACAGTCTGTTG
Product: secreted protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Protein; Signal Peptide Protein; Alpha/Beta Hydrolase Fold; Hydrolases Or Acyltransferases; Hydrolase; Esterase/Lipase/Thioesterase Domain-Containing Protein; Alpha/Beta Hydrolase; Esterase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Family Protein; Polyneuridine-Aldehyde Esterase; Lipase; Conserved Protein; Alpha/Beta Hydrolase Fold Containing Protein; Hydrolase Or Acyltransferase; Extracytoplasmic Hydrolase
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSQPTVVLVHGAFADASSFARVVPELLADGLAVVAPAIPNRSLVGDAEYLGPVLAAIDGPVVLVGHSYGCAVATVAGVAE NVKALVYLAGFVLEEGEALGELQGRFPDSDLGSALVTTPFPGGVDLSVDIQKFPAVFAHDVDPAVTAVLAVSQRPLSAAV FGEKAPAAAWRTRPTWGIVATSDHAINPEVQRFGYQRAGVETVEVDSSHLVMFSQPTVVADLIRTVVKSVPA
Sequences:
>Translated_232_residues MSQPTVVLVHGAFADASSFARVVPELLADGLAVVAPAIPNRSLVGDAEYLGPVLAAIDGPVVLVGHSYGCAVATVAGVAE NVKALVYLAGFVLEEGEALGELQGRFPDSDLGSALVTTPFPGGVDLSVDIQKFPAVFAHDVDPAVTAVLAVSQRPLSAAV FGEKAPAAAWRTRPTWGIVATSDHAINPEVQRFGYQRAGVETVEVDSSHLVMFSQPTVVADLIRTVVKSVPA >Mature_231_residues SQPTVVLVHGAFADASSFARVVPELLADGLAVVAPAIPNRSLVGDAEYLGPVLAAIDGPVVLVGHSYGCAVATVAGVAEN VKALVYLAGFVLEEGEALGELQGRFPDSDLGSALVTTPFPGGVDLSVDIQKFPAVFAHDVDPAVTAVLAVSQRPLSAAVF GEKAPAAAWRTRPTWGIVATSDHAINPEVQRFGYQRAGVETVEVDSSHLVMFSQPTVVADLIRTVVKSVPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23991; Mature: 23859
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPTVVLVHGAFADASSFARVVPELLADGLAVVAPAIPNRSLVGDAEYLGPVLAAIDGP CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCC VVLVGHSYGCAVATVAGVAENVKALVYLAGFVLEEGEALGELQGRFPDSDLGSALVTTPF EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEECCC PGGVDLSVDIQKFPAVFAHDVDPAVTAVLAVSQRPLSAAVFGEKAPAAAWRTRPTWGIVA CCCCEEEEEHHHCCHHHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEEEE TSDHAINPEVQRFGYQRAGVETVEVDSSHLVMFSQPTVVADLIRTVVKSVPA CCCCCCCHHHHHHCHHHCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHCCC >Mature Secondary Structure SQPTVVLVHGAFADASSFARVVPELLADGLAVVAPAIPNRSLVGDAEYLGPVLAAIDGP CCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCC VVLVGHSYGCAVATVAGVAENVKALVYLAGFVLEEGEALGELQGRFPDSDLGSALVTTPF EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEECCC PGGVDLSVDIQKFPAVFAHDVDPAVTAVLAVSQRPLSAAVFGEKAPAAAWRTRPTWGIVA CCCCEEEEEHHHCCHHHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEEEE TSDHAINPEVQRFGYQRAGVETVEVDSSHLVMFSQPTVVADLIRTVVKSVPA CCCCCCCHHHHHHCHHHCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA