| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317966
Identifier: 158317966
GI number: 158317966
Start: 7563140
End: 7563598
Strand: Direct
Name: 158317966
Synonym: Franean1_6226
Alternate gene names: NA
Gene position: 7563140-7563598 (Clockwise)
Preceding gene: 158317965
Following gene: 158317974
Centisome position: 84.2
GC content: 64.27
Gene sequence:
>459_bases GTGGTCAACTACCGCGAACCCGACACGGCGGAGGCGATCGGCAAGGCTGCGCCGGACGGCGTCCACATCGTCGTCGAGGT GAACCCAGGCGCGAACGCCGAGCTCAACCAGCAGGTCCTGGCTACCAACGGAGTAGTGGTGATCTACGCCGACGGCGGGA CGCATCTGCCCATCCCGATTTTGCCGTCCATGATGTCGAACACCCGGCTGCAGTTCATCCTCGTCTACACCATGCCGGAC ACGGCCAAACTCCAAGCTGTCAAGGACATCACAGCAGCGGCAGCAGTCGGCGCGCTGCGCATCGGCACGGACGCCGGTCT CCCGCTACACCGGTTCCGGCTGGAACAGACCGCCGCAGCGCATGACGCAGTCGAGGCAGGCACCGTCGGAAAGGTCCTTG TCGACGTCACCCATGCCCCGGAAGATCCCGAACAAGTTCACCTTCCGGACGAGGAATAG
Upstream 100 bases:
>100_bases GCCGTCGACGGTGCAGACGACGACGTCGTAGAGCGGATCTCCGGCCGGCCCGGCCGCACTCGGACCGTCGGCGCTGGCCG CCGCCGCAGGTACCCACCAT
Downstream 100 bases:
>100_bases TGGCACCGCATGATGTCCCGGGGCATCGACATAGCCCTGAAATCACGATCCTGAGTTGAGGGCTTCGTGGTTTTCGGGGC GGCTCCGCGGGGGCGGCCGC
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Oxidoreductase; NADPHQuinone Reductase; Zn-Dependent Oxidoreductase; Quinone Oxidoreductase
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MVNYREPDTAEAIGKAAPDGVHIVVEVNPGANAELNQQVLATNGVVVIYADGGTHLPIPILPSMMSNTRLQFILVYTMPD TAKLQAVKDITAAAAVGALRIGTDAGLPLHRFRLEQTAAAHDAVEAGTVGKVLVDVTHAPEDPEQVHLPDEE
Sequences:
>Translated_152_residues MVNYREPDTAEAIGKAAPDGVHIVVEVNPGANAELNQQVLATNGVVVIYADGGTHLPIPILPSMMSNTRLQFILVYTMPD TAKLQAVKDITAAAAVGALRIGTDAGLPLHRFRLEQTAAAHDAVEAGTVGKVLVDVTHAPEDPEQVHLPDEE >Mature_152_residues MVNYREPDTAEAIGKAAPDGVHIVVEVNPGANAELNQQVLATNGVVVIYADGGTHLPIPILPSMMSNTRLQFILVYTMPD TAKLQAVKDITAAAAVGALRIGTDAGLPLHRFRLEQTAAAHDAVEAGTVGKVLVDVTHAPEDPEQVHLPDEE
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16045; Mature: 16045
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNYREPDTAEAIGKAAPDGVHIVVEVNPGANAELNQQVLATNGVVVIYADGGTHLPIPI CCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEEECCCCCCCCCC LPSMMSNTRLQFILVYTMPDTAKLQAVKDITAAAAVGALRIGTDAGLPLHRFRLEQTAAA CCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHH HDAVEAGTVGKVLVDVTHAPEDPEQVHLPDEE HHHHCCCCCCEEEEEEECCCCCCCEECCCCCC >Mature Secondary Structure MVNYREPDTAEAIGKAAPDGVHIVVEVNPGANAELNQQVLATNGVVVIYADGGTHLPIPI CCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEEECCCCCCCCCC LPSMMSNTRLQFILVYTMPDTAKLQAVKDITAAAAVGALRIGTDAGLPLHRFRLEQTAAA CCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHH HDAVEAGTVGKVLVDVTHAPEDPEQVHLPDEE HHHHCCCCCCEEEEEEECCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA