Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317974

Identifier: 158317974

GI number: 158317974

Start: 7571526

End: 7572734

Strand: Direct

Name: 158317974

Synonym: Franean1_6234

Alternate gene names: NA

Gene position: 7571526-7572734 (Clockwise)

Preceding gene: 158317966

Following gene: 158317980

Centisome position: 84.3

GC content: 68.49

Gene sequence:

>1209_bases
GTGCGCTTAGGTAGAACAACACGGTTACTCGGTGTGGCTGCCGCGGTTCTCGTTGCGGCAGCCACGGGTTGCTCCTCGAC
ACCGGGGGCCGCAAGTGCCGCGGTGTGTGACAGTCCTGGCGTCACCCCCGGCGAGGTGAACCTCGGCCTGGTGTTCTCCG
ATTCGGGCGTGGGCAGTGCCGCGTTTGCCTCGGCCCGAGCCGGCGCGGACGCACGGTTCGGCCTGGCCAACGAGGAGGGC
GGGGTACACGGCCGGAAGATCGTCTACCAGTGGCGTGACGACGCGAACGACCCCGCCCAGAACGCCCGCGTCATCCAGGA
GCTCCTCCGCGGCGACAGTGCTTTCGGCCTCGTGACGATCACCACCGCCTTCGGCAGCGCACCGGCCGACCTGGCGAAGC
AGAACGTTCCCGTCATCGGGTTCGGTCTGCCGACCTTGGCCGAGTACCAGAACATGTTCTCCACCATGTACCAGGCCTCG
CCGGTCACGATCGGCCGCTACCTCCGGGACAGCGGTGGCAGCAAGGTCGGCGTCGTGATCACGGGGTCGTCGGCGTCCAC
TTTGGATATCATCAAGATGTACAAGAGCGCCTTCGAGTCGGTCGGGCTCACCGTGGCCGACACCATCTCCTACGCGCACA
GCGTTGACAGCCCGGCCCGCGTGGCCCAGCAGCTGGCGGCCTCCGGCGTCAACGCGCTGGTTGGCTTCACGACCACCGAG
GATCTCGCCGAGATCATGGGCGCCGTACGTACGGCGAACCTGAACCTCGCCACCACCGTCTCGTTCACCGGGTACGACCG
GGGCCTGCTGCCCACCCTGGGCCCGGCACTCGCGGGCGTCTCGATCCCCGCGTACTTCCGCCCCTTCGAGGCGGGCGGCG
CGGCCATCGACCGGTACCGCGCCGCGATGGTCCGCTACGCGCCGGAAGCCACGCAGCCAGACCAGCAGTTCGCGATGAAC
GCGTACATCTACGCCGACATGTTCGTACGCGGGCTCGACCTCGCAGGTGACTGCCCCACCCGTGACGGGTTCATCAGCGC
GCTGCGGTCAGCGTCCGACTACGACGCGGGCGGCCTGATCGAACCCGTCAACCTGGCCACGAATCGTACCGGGGCGCTCA
ACTGCTACGCCTTCGTCCAGGTCAACCCCACGGGCACCGGGTTCCAGGTCGCCCGCCCACGCCTCTGCGCCGACGGCACG
ACCGGCTGA

Upstream 100 bases:

>100_bases
TAAATGAGCTAGAGAAATGACCTCACCGACGGCAGGAGAGAAGCTGGTGCGCCGCGCCGGCGCCCTCCACCGTCCGCGGC
TATCCATCGTGGAGGTACGG

Downstream 100 bases:

>100_bases
AGTAGGCGGCGCGATGCCGGGACCGCGCCGACCACCGCTGTCAGTCCGCTTTGGACGCGATGCCCTCGTAGGCGAAGCCG
AAGAACTCGGGCCCGCCCAT

Product: putative Leu/Ile/Val-binding lipoprotein transmembrane

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRLGRTTRLLGVAAAVLVAAATGCSSTPGAASAAVCDSPGVTPGEVNLGLVFSDSGVGSAAFASARAGADARFGLANEEG
GVHGRKIVYQWRDDANDPAQNARVIQELLRGDSAFGLVTITTAFGSAPADLAKQNVPVIGFGLPTLAEYQNMFSTMYQAS
PVTIGRYLRDSGGSKVGVVITGSSASTLDIIKMYKSAFESVGLTVADTISYAHSVDSPARVAQQLAASGVNALVGFTTTE
DLAEIMGAVRTANLNLATTVSFTGYDRGLLPTLGPALAGVSIPAYFRPFEAGGAAIDRYRAAMVRYAPEATQPDQQFAMN
AYIYADMFVRGLDLAGDCPTRDGFISALRSASDYDAGGLIEPVNLATNRTGALNCYAFVQVNPTGTGFQVARPRLCADGT
TG

Sequences:

>Translated_402_residues
MRLGRTTRLLGVAAAVLVAAATGCSSTPGAASAAVCDSPGVTPGEVNLGLVFSDSGVGSAAFASARAGADARFGLANEEG
GVHGRKIVYQWRDDANDPAQNARVIQELLRGDSAFGLVTITTAFGSAPADLAKQNVPVIGFGLPTLAEYQNMFSTMYQAS
PVTIGRYLRDSGGSKVGVVITGSSASTLDIIKMYKSAFESVGLTVADTISYAHSVDSPARVAQQLAASGVNALVGFTTTE
DLAEIMGAVRTANLNLATTVSFTGYDRGLLPTLGPALAGVSIPAYFRPFEAGGAAIDRYRAAMVRYAPEATQPDQQFAMN
AYIYADMFVRGLDLAGDCPTRDGFISALRSASDYDAGGLIEPVNLATNRTGALNCYAFVQVNPTGTGFQVARPRLCADGT
TG
>Mature_402_residues
MRLGRTTRLLGVAAAVLVAAATGCSSTPGAASAAVCDSPGVTPGEVNLGLVFSDSGVGSAAFASARAGADARFGLANEEG
GVHGRKIVYQWRDDANDPAQNARVIQELLRGDSAFGLVTITTAFGSAPADLAKQNVPVIGFGLPTLAEYQNMFSTMYQAS
PVTIGRYLRDSGGSKVGVVITGSSASTLDIIKMYKSAFESVGLTVADTISYAHSVDSPARVAQQLAASGVNALVGFTTTE
DLAEIMGAVRTANLNLATTVSFTGYDRGLLPTLGPALAGVSIPAYFRPFEAGGAAIDRYRAAMVRYAPEATQPDQQFAMN
AYIYADMFVRGLDLAGDCPTRDGFISALRSASDYDAGGLIEPVNLATNRTGALNCYAFVQVNPTGTGFQVARPRLCADGT
TG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41546; Mature: 41546

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGRTTRLLGVAAAVLVAAATGCSSTPGAASAAVCDSPGVTPGEVNLGLVFSDSGVGSA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCHH
AFASARAGADARFGLANEEGGVHGRKIVYQWRDDANDPAQNARVIQELLRGDSAFGLVTI
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE
TTAFGSAPADLAKQNVPVIGFGLPTLAEYQNMFSTMYQASPVTIGRYLRDSGGSKVGVVI
EECCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEE
TGSSASTLDIIKMYKSAFESVGLTVADTISYAHSVDSPARVAQQLAASGVNALVGFTTTE
ECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCHH
DLAEIMGAVRTANLNLATTVSFTGYDRGLLPTLGPALAGVSIPAYFRPFEAGGAAIDRYR
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCHHCCCCCCCCHHHHHHH
AAMVRYAPEATQPDQQFAMNAYIYADMFVRGLDLAGDCPTRDGFISALRSASDYDAGGLI
HHHHHCCCCCCCCHHHHHHHHHEEEHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
EPVNLATNRTGALNCYAFVQVNPTGTGFQVARPRLCADGTTG
CCCHHCCCCCCCEEEEEEEEECCCCCCCEECCCEECCCCCCC
>Mature Secondary Structure
MRLGRTTRLLGVAAAVLVAAATGCSSTPGAASAAVCDSPGVTPGEVNLGLVFSDSGVGSA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCHH
AFASARAGADARFGLANEEGGVHGRKIVYQWRDDANDPAQNARVIQELLRGDSAFGLVTI
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE
TTAFGSAPADLAKQNVPVIGFGLPTLAEYQNMFSTMYQASPVTIGRYLRDSGGSKVGVVI
EECCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEE
TGSSASTLDIIKMYKSAFESVGLTVADTISYAHSVDSPARVAQQLAASGVNALVGFTTTE
ECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCHH
DLAEIMGAVRTANLNLATTVSFTGYDRGLLPTLGPALAGVSIPAYFRPFEAGGAAIDRYR
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCHHCCCCCCCCHHHHHHH
AAMVRYAPEATQPDQQFAMNAYIYADMFVRGLDLAGDCPTRDGFISALRSASDYDAGGLI
HHHHHCCCCCCCCHHHHHHHHHEEEHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
EPVNLATNRTGALNCYAFVQVNPTGTGFQVARPRLCADGTTG
CCCHHCCCCCCCEEEEEEEEECCCCCCCEECCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA